SMTL ID : 9vsp.1

The DCY1020-bound structure of TMEM175

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY 3.40 Å

Oligo State

homo-dimer

Ligands

2 x 01: (2S)-2-butyl-6,7-bis(chloranyl)-2-cyclopentyl-5-[3-(1H-1,2,3,4-tetrazol-5-yl)propoxy]-3H-inden-1-one

01.1: 4 residues within 4Å: Chain A: L.311, A.318, Q.452 Chain B: M.118 1 PLIP interactions: 1 interactions with chain A pi-Cation interactions: A:H.449 01.2: 5 residues within 4Å: Chain A: L.114, M.118 Chain B: A.318, H.449, P.456 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:P.456, A:L.114

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhu, X. et al., Structural insights into the activation of TMEM175 by small molecule. Neuron (2025)

Release Date

2025-09-17

Peptides

Endosomal/lysosomal proton channel TMEM175: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Membrane

We predict this structure to be a membrane protein.
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Endosomal/lysosomal proton channel TMEM175

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