SMTL ID : 9wlv.1 (1 other biounit)

The Crystal Structure of Alpha-Beta-fold_hydrolase from Microlunatus sagamiharensis.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: R.71, R.222 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.222 Water bridges: A:R.71 Salt bridges: A:R.71 SO4.2: 3 residues within 4Å: Chain A: R.71, R.222, G.223 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.223 Salt bridges: A:R.71, A:R.222

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 1 residues within 4Å: Chain A: R.49 Ligand excluded by PLIP

1 x 4HP: 4-HYDROXYPHENYLACETATE(Non-covalent)

4HP.4: 14 residues within 4Å: Chain A: G.31, T.32, P.33, W.96, S.97, G.98, V.174, L.178, M.198, M.202, M.245, H.271, L.272 Ligands: GOL.5 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:W.96, A:L.178, A:L.272 Hydrogen bonds: A:T.32, A:S.97, A:G.98 Salt bridges: A:H.271

6 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 9 residues within 4Å: Chain A: T.32, S.97, G.98, V.123, N.141, F.145, M.245, V.246 Ligands: 4HP.4 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.32, A:N.141 GOL.6: 3 residues within 4Å: Chain A: S.63, R.207, T.208 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.63, A:R.207 Water bridges: A:G.62, A:S.63, A:S.63 GOL.7: 8 residues within 4Å: Chain A: F.28, V.39, M.42, W.96, Y.194, M.198, L.272, G.275 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:W.96 GOL.8: 3 residues within 4Å: Chain A: Q.140, S.179, S.180 3 PLIP interactions: 3 interactions with chain A Water bridges: A:Q.140, A:Q.140, A:S.179 GOL.9: 3 residues within 4Å: Chain A: V.73, V.108, R.109 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.109 Water bridges: A:V.108 GOL.10: 4 residues within 4Å: Chain A: H.264, A.281, D.284, E.285 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.264, A:E.285

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huang, J. et al., The Crystal Structure of Alpha-Beta-fold_hydrolase from Microlunatus sagamiharensis. To Be Published

Release Date

2025-10-29

Peptides

Pimeloyl-ACP methyl ester carboxylesterase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
AAA

Pimeloyl-ACP methyl ester carboxylesterase

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