SMTL ID : 9yd8.2 (1 other biounit)

Crystal structure of Phospholipase D (PLD) from Arcanobacterium haemolyticum

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.45 Å

Oligo State

monomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 3 residues within 4Å: Chain A: R.34, H.67, D.68 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.67

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 4 residues within 4Å: Chain A: E.53, D.55, D.101, K.103 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.53, A:E.53, A:D.55, A:D.101, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gismene, C. et al., Structural characterization of Phospholipase D from Arcanobacterium haemolyticum: insights into stability and function. To Be Published

Release Date

2025-10-15

Peptides

Phospholipase D: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Phospholipase D

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