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nsp10 / nsp14 hetero-oligomeric complex | P0DTD1 PRO_0000449628, PRO_0000449631
Created: May 5, 2023 at 21:33
Model 01
- Ligands
1 x G3A ,1 x MG ,1 x SAH ,4 x ZN 1 x GUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATEG3A.8: 17 residues within 4Å:- Chain B: N.306, C.309, R.310, Q.313, K.336, I.338, W.385, N.386, N.388, F.401, Y.420, N.422, K.423, F.426, T.428, F.506,
- Ligand: SAH.7
14 PLIP interactions:14 interactions with chain B- Hydrogen bonds: B:N.306, B:N.306, B:R.310, B:R.310, B:I.338, B:N.386, B:N.388
- Salt bridges: B:R.310, B:R.310, B:R.310
- pi-Stacking: B:W.385, B:F.426
- pi-Cation interactions: B:R.310, B:R.310
1 x MAGNESIUM IONMG.6: 3 residues within 4Å:- Chain B: D.90, A.187, E.191
3 PLIP interactions:3 interactions with chain B- Metal complexes: B:D.90, B:E.191, B:E.191
1 x S-ADENOSYL-L-HOMOCYSTEINESAH.7: 14 residues within 4Å:- Chain B: W.292, G.333, N.334, P.335, D.352, A.353, Q.354, L.366, F.367, Y.368, W.385, N.386, C.387, V.389
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:A.353, B:Q.354, B:Y.368, B:Y.368, B:W.385, B:W.385
4 x ZINC IONZN.1: 4 residues within 4Å:- Chain A: C.74, C.77, H.83, C.90
4 PLIP interactions:4 interactions with chain A- Metal complexes: A:C.74, A:C.77, A:H.83, A:C.90
ZN.2: 4 residues within 4Å:- Chain A: C.117, C.120, C.128, C.130
4 PLIP interactions:4 interactions with chain A- Metal complexes: A:C.117, A:C.120, A:C.128, A:C.130
ZN.3: 4 residues within 4Å:- Chain B: C.207, C.210, C.226, H.229
3 PLIP interactions:3 interactions with chain B- Metal complexes: B:C.207, B:C.226, B:H.229
ZN.4: 4 residues within 4Å:- Chain B: H.257, C.261, H.264, C.279
4 PLIP interactions:4 interactions with chain B- Metal complexes: B:H.257, B:C.261, B:H.264, B:C.279
QMEANDisCo Local
QMEAN Z-Scores
Template
5c8s.1
Guanine-N7 methyltransferase, Non-structural protein 10
- Seq Identity
- 95.50%
- Coverage
| Biounit Oligo State | Hetero-dimer |
| QSQE | - |
| Method | X-ray, 3.33 Å |
| Overall Seq Identity | 95.50% |
| Overall Seq Similarity | 0.62 |
| Target | Seq Identity | Seq Similarity | Range | Coverage |
|---|---|---|---|---|
| Guanine-N7 methyltransferase | 95.07% | 0.62 | B: 1-525 | 1.00 |
| Non-structural protein 10 | 97.12% | 0.63 | A: 1-131 | 1.00 |
Model-Template Alignment
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