Guanine-N7 methyltransferase (ExoN/nsp14) | YP_009725309.1

Structure
Assessment

Oligo-State

Ligands

GMQE

QMEAN

Monomer

1 x SAM, 2 x ZN

0.98

-1.96

1 x S-ADENOSYLMETHIONINE

SAM.7:

15 residues within 4Å:

7 PLIP interactions:

2 x ZINC ION

ZN.3:	4 residues within 4Å: Chain B: C.207, C.210, C.226, H.229 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.207, B:C.210, B:C.226, B:H.229
ZN.4:	4 residues within 4Å: Chain B: H.257, C.261, H.264, C.279 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:H.257, B:C.261, B:H.264, B:H.264

Global Quality Estimate

Local Quality Estimate

Comparison

Template	Seq Identity	Coverage	Description
5c8t.2.B	95.07%		Guanine-N7 methyltransferase

Ligand	Added to Model	Description
SAM	✓	S-ADENOSYLMETHIONINE
ZN	✓	ZINC ION
ZN	✓	ZINC ION
MG	✕ - Not in contact with model.	MAGNESIUM ION
ZN	✕ - Binding site not conserved.	ZINC ION
ZN	✕ - Binding site not conserved.	ZINC ION
ZN	✕ - Clashing with protein.	ZINC ION

Model-Template Alignment

Template	Seq Identity	Coverage	Description
5c8s.1.B	95.07%		Guanine-N7 methyltransferase

Ligand	Added to Model	Description
G3A	✓	GUANOSINE-P3-ADENOSINE-5',5'-T...
MG	✓	MAGNESIUM ION
SAH	✓	S-ADENOSYL-L-HOMOCYSTEINE
ZN	✓	ZINC ION
ZN	✕ - Binding site not conserved.	ZINC ION
ZN	✕ - Binding site not conserved.	ZINC ION
ZN	✕ - Clashing with protein.	ZINC ION
ZN	✕ - Clashing with protein.	ZINC ION

Structure
Assessment

Oligo-State

Ligands

GMQE

QMEAN

Monomer

2 x ZN

0.98

-3.12

Global Quality Estimate

Local Quality Estimate

Comparison

Template	Seq Identity	Coverage	Description
5nfy.1.A	94.88%		Polyprotein 1ab

Ligand	Added to Model	Description
ZN	✓	ZINC ION
ZN	✓	ZINC ION
PEG	✕ - Not biologically relevant.	DI(HYDROXYETHYL)ETHER
PEG	✕ - Not in contact with model.	DI(HYDROXYETHYL)ETHER
ZN	✕ - Clashing with protein.	ZINC ION
ZN	✕ - Binding site not conserved.	ZINC ION
ZN	✕ - Binding site not conserved.	ZINC ION

Model-Template Alignment

Structure
Assessment

Oligo-State	Ligands	GMQE	QMEAN
Monomer	None	0.07	-4.77

Global Quality Estimate

Local Quality Estimate

Comparison

Template	Seq Identity	Coverage	Description
6a47.1.A	9.26%		Three prime repair exonuclease 2

Ligand	Added to Model	Description
MG	✕ - Binding site not conserved.	MAGNESIUM ION
MG	✕ - Binding site not conserved.	MAGNESIUM ION
NA	✕ - Not biologically relevant.	SODIUM ION

Model-Template Alignment

Biounit Oligo State	Hetero-dimer
QSQE	0.00
Method	X-ray, 3.20 Å
Seq Similarity	0.62
Coverage	1.00
Range	1-525

Biounit Oligo State	Hetero-dimer
QSQE	0.00
Method	X-ray, 3.33 Å
Seq Similarity	0.62
Coverage	1.00
Range	1-525

Biounit Oligo State	Hetero-dimer
QSQE	0.00
Method	X-ray, 3.38 Å
Seq Similarity	0.62
Coverage	1.00
Range	3-525

Biounit Oligo State	Monomer
QSQE	0.00
Method	X-ray, 1.90 Å
Seq Similarity	0.24
Coverage	0.20
Range	84-203

Export Alignment

Alignment Options

Guanine-N7 methyltransferase (ExoN/nsp14) | YP_009725309.1

Created: Feb. 10, 2020 at 17:22

Model Results

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Export Alignment

Alignment Options

Guanine-N7 methyltransferase (ExoN/nsp14) | YP_009725309.1

Created: Feb. 10, 2020 at 17:22

Model Results

Click model image to view in 3D

Click model image to view in 3D

Background

Resolution