Helicase nsp13 (Hel) | P0DTD1 PRO_0000449630

Created: May 5, 2023 at 21:34

Model Results

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Structure
Assessment

Oligo-State: Monomer
GMQE: 0.90
QMEANDisCo Global:: 0.86 ± 0.05

Ligands

3 x ZN

3 x ZINC ION

ZN.1:	4 residues within 4Å: Chain A: C.50, C.55, C.72, H.75 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.50, A:C.55, A:C.72, A:H.75
ZN.2:	4 residues within 4Å: Chain A: C.16, C.19, H.33, H.39 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.16, A:C.19, A:H.33, A:H.39
ZN.3:	5 residues within 4Å: Chain A: C.5, C.8, C.26, K.28, C.29 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.5, A:C.8, A:C.26, A:C.29

QMEANDisCo Local

QMEAN Z-Scores

Template

5rlc.1.A Helicase
PanDDA analysis group deposition -- Crystal Structure of SARS-CoV-2 helicase in complex with Z56923284

Seq Identity: 100.00%
Coverage

Model-Template Alignment

Structure
Assessment

Oligo-State: Monomer
GMQE: 0.85
QMEANDisCo Global:: 0.81 ± 0.05

Ligands

3 x ZN

3 x ZINC ION

ZN.1:	4 residues within 4Å: Chain A: C.5, C.8, C.26, C.29 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.5, A:C.8, A:C.26, A:C.29
ZN.2:	4 residues within 4Å: Chain A: C.16, C.19, H.33, H.39 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.16, A:C.19, A:H.33, A:H.39
ZN.3:	4 residues within 4Å: Chain A: C.50, C.55, C.72, H.75 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:C.50, A:C.55, A:H.75

QMEANDisCo Local

QMEAN Z-Scores

Template

5wwp.1.A ORF1ab
Crystal structure of Middle East respiratory syndrome coronavirus helicase (MERS-CoV nsp13)

Seq Identity: 71.60%
Coverage

Model-Template Alignment