UniProtKB AC (Name) | UniProtKB Section | Organism | Description | |
---|---|---|---|---|
Q3U0L2 (AN33B_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Ankyrin repeat domain-containing protein 33B; | |
Q7TSY6 (CELF4_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | CUGBP Elav-like family member 4; Bruno-like protein 4; CUG-BP- and ETR-3-like factor 4; RNA-binding protein BRUNOL-4; | |
Q8VEJ4 (NLE1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Notchless protein homolog 1; | |
Q99KZ6 (ZN639_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Zinc finger protein 639; Zinc finger protein ZASC1; | |
Q91V09 (WDR13_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | WD repeat-containing protein 13; | |
Q8BMJ8 (SP8_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Transcription factor Sp8; | |
P97861 (KRT86_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Keratin, type II cuticular Hb6; Keratin-86; Type II hair keratin Hb6; Type-II keratin Kb26; | |
P61211 (ARL1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | ADP-ribosylation factor-like protein 1; | |
P61205 (ARF3_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | ADP-ribosylation factor 3; | |
Q8BSL7 (ARF2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | ADP-ribosylation factor 2; | |
Q0VAX3 (FS2P1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Fatty acid desaturase 2-like protein FADS2B; Fatty acid desaturase 2B, pseudogene; | |
Q8C2L6 (T161B_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Transmembrane protein 161B; | |
Q3TQB2 (FXRD1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | FAD-dependent oxidoreductase domain-containing protein 1; | |
Q9JI11 (STK4_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Serine/threonine-protein kinase 4; Mammalian STE20-like protein kinase 1; STE20-like kinase MST1; Serine/threonine-protein kinase 4 37kDa subunit; MST1/N; Serine/threonine-protein kinase 4 18kDa subunit; MST1/C; | |
Q9JI38 (PUS3_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | tRNA pseudouridine(38/39) synthase; tRNA pseudouridine synthase 3; tRNA pseudouridylate synthase 3; tRNA-uridine isomerase 3; | |
O89110 (CASP8_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Caspase-8; Caspase-8 subunit p18; Caspase-8 subunit p10; | |
Q148B6 (SPERI_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Speriolin; Spermatogenesis and centriole-associated protein 1; Spermatogenic cell-specific Cdc20-binding protein; | |
Q8C1Y8 (CCZ1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Vacuolar fusion protein CCZ1 homolog; | |
Q9DC63 (FBX3_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | F-box only protein 3; | |
Q8VC10 (OSGI1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Oxidative stress-induced growth inhibitor 1; | |
Q8BHA9 (PXYP1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | 2-phosphoxylose phosphatase 1; Acid phosphatase-like protein 2; | |
Q3TR54 (GSDC4_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Gasdermin-C4; Gasdermin-C4, N-terminal; GSDMC4-NT; Gasdermin-C4, C-terminal; GSDMC4-CT; | |
Q9R118 (HTRA1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Serine protease HTRA1; High-temperature requirement A serine peptidase 1; Serine protease 11; | |
Q9DAI2 (IFT22_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Intraflagellar transport protein 22 homolog; Rab-like protein 5; | |
Q8VCA6 (T161A_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Transmembrane protein 161A; | |
P56475 (GBRR1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Gamma-aminobutyric acid receptor subunit rho-1; GABA(A) receptor subunit rho-1; GABA(C) receptor; | |
P81068 (IRX1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Iroquois-class homeodomain protein IRX-1; Homeodomain protein IRXA1; Iroquois homeobox protein 1; | |
Q32M07 (KAD8_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Adenylate kinase 8; ATP-AMP transphosphorylase 8; | |
Q3V384 (AFG1L_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | AFG1-like ATPase; Lactation elevated protein 1; | |
O35732 (CFLAR_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | CASP8 and FADD-like apoptosis regulator; Caspase homolog; Caspase-eight-related protein; Caspase-like apoptosis regulatory protein; Cellular FLICE-like inhibitory protein; FADD-like antiapoptotic molecule 1; Inhibitor of FLICE; MACH-related inducer of toxicity; Usurpin; CASP8 and FADD-like apoptosis regulator subunit p43; CASP8 and FADD-like apoptosis regulator subunit p12; | |
P32921 (SYWC_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Tryptophan--tRNA ligase, cytoplasmic; Tryptophanyl-tRNA synthetase; T1-TrpRS; T2-TrpRS; | |
Q80XS7 (FA83E_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Protein FAM83E; | |
P01896 (HA1Z_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | H-2 class I histocompatibility antigen, alpha chain; Clone PH-2D-2; | |
Q9Z2L6 (MINP1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Multiple inositol polyphosphate phosphatase 1; 2,3-bisphosphoglycerate 3-phosphatase; | |
Q6DFW0 (CI072_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Guanine nucleotide exchange factor C9orf72 homolog; | |
Q60987 (FOXG1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Forkhead box protein G1; Brain factor 1; Forkhead-related protein FKHL1; | |
Q811M1 (RHG15_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Rho GTPase-activating protein 15; ArhGAP15; Rho-type GTPase-activating protein 15; | |
Q5F2L2 (OFUT3_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | GDP-fucose protein O-fucosyltransferase 3; Alpha-(1,3)-fucosyltransferase 10; Fucosyltransferase X; Galactoside 3-L-fucosyltransferase 10; | |
Q8BYH3 (TRM13_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | tRNA:m(4)X modification enzyme TRM13 homolog; Coiled-coil domain-containing protein 76; | |
Q2KHK6 (GSDC2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Gasdermin-C2; Gasdermin-C2, N-terminal; GSDMC2-NT; Gasdermin-C2, C-terminal; GSDMC2-CT; | |
Q05A56 (HYAL4_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Hyaluronidase-4; Chondroitin sulfate endo-beta-N-acetylgalactosaminidase; Chondroitin sulfate hydrolase; Hyaluronoglucosaminidase-4; | |
Q99JG2 (G37L1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | G-protein coupled receptor 37-like 1; Endothelin B receptor-like protein 2; | |
Q8VCC6 (CCM2L_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Cerebral cavernous malformations 2 protein-like; | |
O35701 (MATN3_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Matrilin-3; | |
Q61805 (LBP_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Lipopolysaccharide-binding protein; | |
Q9QYZ4 (SMOK1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Sperm motility kinase 1; | |
Q9QYZ3 (SMK2B_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Sperm motility kinase 2B; | |
P54822 (PUR8_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Adenylosuccinate lyase; Adenylosuccinase; | |
A2KF29 (SMKTR_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Sperm motility kinase Tcr mutant form; Dominant negative form of Smok; Responder protein Smok-Tcr; | |
P47740 (AL3A2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Aldehyde dehydrogenase family 3 member A2; Aldehyde dehydrogenase 3; Fatty aldehyde dehydrogenase; |
The house mouse (Mus musculus) is a small mammal of the order Rodentia, characteristically having a pointed snout, small rounded ears, and a long naked or almost hairless tail. House mice thrive under a variety of conditions; they are found in and around homes and commercial structures, as well as in open fields and agricultural lands where they build underground gangways and nests.
Mus musculus is one of the most important model organisms in biology and medicine. Mice are biologically similar to humans and are thus good models for genetic diseases and research on the immune system.
The complete mouse reference genome was sequenced in 2002.
From left to right: i) The number of proteins in the reference proteome of Mus musculus, ii) the number of unique protein sequences for which at least one model is available, iii) the total number of models and iv) a coverage bar plot is shown.
The bar plot shows the coverage for every protein in the reference proteome of Mus musculus for which there is at least one model. Different colours (dark green to red boxes) represent the coverage of the targets. Targets with high coverage are represented in dark green (more than 80% of the target's length is covered by models), whereas low coverage is shown in red. The size of each box is proportional to the number of target sequences with a given coverage.
For information on the latest proteome for Mus musculus, please visit UniProtKB.
You can easily download the latest protein sequences for Mus musculus proteome here. Please note this download is for the current UniProtKB release, which may be different to release 2025_03 that was used for the most up to date SWISS-MODEL Repository.
Proteins in proteome | Sequences modelled | Models |
21,803 | 19,103 | 43,738 |
Detailed coverage numbers are obtained by hovering the mouse over one of the boxes.
The plot shows the evolution over years (x-axis) of the fraction of Mus musculus reference proteome residues (y-axis) for which structural information is available. Different colors (light blue to dark blue) in the plot represent the quality of the sequence alignment between the reference proteome sequences (targets) and the sequences of the proteins in the structure database (templates). Alignments with low sequence identity are displayed in light blue, whereas alignments with high sequence identity are depicted in dark blue. The SWISS-MODEL Template Library is used as database of templates. Only target-template alignments found by HHblits and only residues with atom coordinates are considered.
This chart shows the percentage of residues in the Mus musculus proteome which are covered by experimental structures and the enhancement of coverage by homology modelling by the SWISS-MODEL pipeline. Experimental residue coverage is determined using SIFTS mapping. For residues which are not covered by experimental structures (including where there are no atom records in SIFTS mapping) the model coverage bars are coloured by QMEANDisCo local quality score.
Many proteins form oligomeric structures either by self-assembly (homo-oligomeric) or by assembly with other proteins (hetero-oligomeric) to accomplish their function. In SWISS-MODEL Repository, the quaternary structure annotation of the template is used to model the target sequence in its oligomeric form. Currently our method is limited to the modelling of homo-oligomeric assemblies. The oligomeric state of the template is only considered if the interface is conserved.
Single Chain | 2-mer | 3-mer | 4-mer | 5-mer | 6-mer | 7-mer | 8-mer | 9-mer | 10-mer | 11-mer | 12-mer | 14-mer | 16-mer | 18-mer | 20-mer | 21-mer | 24-mer | 25-mer | 32-mer | 34-mer | 36-mer | 39-mer | 40-mer | 44-mer | 46-mer | 48-mer | 60-mer | 62-mer |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
38,915 | 3,439 | 298 | 656 | 59 | 144 | 21 | 50 | 2 | 21 | 8 | 47 | 4 | 14 | 3 | 3 | 1 | 18 | 4 | 1 | 1 | 1 | 1 | 7 | 1 | 1 | 4 | 11 | 3 |