| UniProtKB AC (Name) | UniProtKB Section | Organism | Description | |
|---|---|---|---|---|
| Q6GQT1 (A2MG_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Alpha-2-macroglobulin-P; Alpha-2-macroglobulin; | |
| Q8K442 (ABC8A_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | ABC-type organic anion transporter ABCA8A; ATP-binding cassette sub-family A member 8A; | |
| Q8K440 (ABC8B_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | ABC-type organic anion transporter ABCA8B; ATP-binding cassette sub-family A member 8B; | |
| P41234 (ABCA2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | ATP-binding cassette sub-family A member 2; ATP-binding cassette transporter 2; | |
| Q8R420 (ABCA3_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Phospholipid-transporting ATPase ABCA3; ATP-binding cassette sub-family A member 3; Xenobiotic-transporting ATPase ABCA3; 150 Kda mature form; | |
| O35600 (ABCA4_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Retinal-specific phospholipid-transporting ATPase ABCA4; ATP-binding cassette sub-family A member 4; RIM ABC transporter; Retinal-specific ATP-binding cassette transporter; | |
| Q8K448 (ABCA5_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Cholesterol transporter ABCA5; ATP-binding cassette sub-family A member 5; | |
| Q8K441 (ABCA6_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | ATP-binding cassette sub-family A member 6; | |
| Q91V24 (ABCA7_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | ATP-binding cassette sub-family A member 7; | |
| Q8K449 (ABCA9_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | ATP-binding cassette sub-family A member 9; | |
| E9Q876 (ABCAC_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Glucosylceramide transporter ABCA12; ATP-binding cassette sub-family A member 12; | |
| Q5SSE9 (ABCAD_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | ATP-binding cassette sub-family A member 13; | |
| E9PX95 (ABCAH_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | ATP-binding cassette sub-family A member 17; | |
| B5X0E4 (ABCB5_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | ATP-binding cassette sub-family B member 5; ABCB5 P-gp; P-glycoprotein ABCB5; | |
| Q9QY30 (ABCBB_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Bile salt export pump; ATP-binding cassette sub-family B member 11; Sister of P-glycoprotein; | |
| P70170 (ABCC9_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | ATP-binding cassette sub-family C member 9; Sulfonylurea receptor 2; | |
| Q7TQI7 (ABTB2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Ankyrin repeat and BTB/POZ domain-containing protein 2; | |
| Q6GQW0 (ABTB3_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Ankyrin repeat and BTB/POZ domain-containing protein 3; BTB/POZ domain-containing protein 11; | |
| Q5SWU9 (ACACA_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Acetyl-CoA carboxylase 1; ACC-alpha; Acetyl-CoA carboxylase 265; | |
| E9Q4Z2 (ACACB_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Acetyl-CoA carboxylase 2; ACC-beta; | |
| Q8K370 (ACD10_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Acyl-CoA dehydrogenase family member 10; | |
| Q9JIX8 (ACINU_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Apoptotic chromatin condensation inducer in the nucleus; | |
| O54967 (ACK1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Activated CDC42 kinase 1; Non-receptor protein tyrosine kinase Ack; Tyrosine kinase non-receptor protein 2; | |
| Q91V92 (ACLY_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | ATP-citrate synthase; ATP-citrate (pro-S-)-lyase; Citrate cleavage enzyme; | |
| Q80WC9 (ACSF4_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Beta-alanine-activating enzyme; Acyl-CoA synthetase family member 4; Protein LYS2 homolog; | |
| O88444 (ADCY1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Adenylate cyclase type 1; ATP pyrophosphate-lyase 1; Adenylate cyclase type I; Adenylyl cyclase 1; Ca(2+)/calmodulin-activated adenylyl cyclase; | |
| Q80TL1 (ADCY2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Adenylate cyclase type 2; ATP pyrophosphate-lyase 2; Adenylate cyclase type II; Adenylyl cyclase 2; | |
| Q91WF3 (ADCY4_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Adenylate cyclase type 4; ATP pyrophosphate-lyase 4; Adenylate cyclase type IV; Adenylyl cyclase 4; | |
| P84309 (ADCY5_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Adenylate cyclase type 5; ATP pyrophosphate-lyase 5; Adenylate cyclase type V; Adenylyl cyclase 5; | |
| Q01341 (ADCY6_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Adenylate cyclase type 6; ATP pyrophosphate-lyase 6; Adenylate cyclase type VI; Adenylyl cyclase 6; Ca(2+)-inhibitable adenylyl cyclase; | |
| P51829 (ADCY7_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Adenylate cyclase type 7; ATP pyrophosphate-lyase 7; Adenylate cyclase type VII; Adenylyl cyclase 7; | |
| P97490 (ADCY8_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Adenylate cyclase type 8; ATP pyrophosphate-lyase 8; Adenylate cyclase type VIII; Adenylyl cyclase 8; Ca(2+)/calmodulin-activated adenylyl cyclase; | |
| P51830 (ADCY9_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Adenylate cyclase type 9; ATP pyrophosphate-lyase 9; Adenylate cyclase type IX; Adenylyl cyclase 9; Adenylyl cyclase type 10; | |
| Q8C0T9 (ADCYA_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Adenylate cyclase type 10; Germ cell soluble adenylyl cyclase; Testicular soluble adenylyl cyclase; | |
| G3UZ78 (ADGB_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Androglobin; | |
| Q8CHC8 (ADNP2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Activity-dependent neuroprotector homeobox protein 2; Zinc finger protein 508; | |
| Q9Z103 (ADNP_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Activity-dependent neuroprotector homeobox protein; Activity-dependent neuroprotective protein; | |
| Q640N1 (AEBP1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Adipocyte enhancer-binding protein 1; Aortic carboxypeptidase-like protein; | |
| A2AJA7 (AEGP_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Apical endosomal glycoprotein; MAM domain-containing protein 4; | |
| O88573 (AFF1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | AF4/FMR2 family member 1; Proto-oncogene AF4; | |
| P51827 (AFF3_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | AF4/FMR2 family member 3; Lymphoid nuclear protein related to AF4; | |
| Q9ESC8 (AFF4_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | AF4/FMR2 family member 4; | |
| Q3UHD9 (AGAP2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2; Centaurin-gamma-1; Phosphatidylinositol 3-kinase enhancer; | |
| Q91ZV8 (AGRA2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Adhesion G protein-coupled receptor A2; G-protein coupled receptor 124; Tumor endothelial marker 5; | |
| Q7TT36 (AGRA3_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Adhesion G protein-coupled receptor A3; G-protein coupled receptor 125; | |
| Q8CGM1 (AGRB2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Adhesion G protein-coupled receptor B2; Brain-specific angiogenesis inhibitor 2; | |
| Q80ZF8 (AGRB3_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Adhesion G protein-coupled receptor B3; Brain-specific angiogenesis inhibitor 3; | |
| G5E8Q8 (AGRF5_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Adhesion G protein-coupled receptor F5; G-protein coupled receptor 116; | |
| B7ZCC9 (AGRG4_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Adhesion G-protein coupled receptor G4; G-protein coupled receptor 112; | |
| Q6F3F9 (AGRG6_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Adhesion G-protein coupled receptor G6; Developmentally regulated G-protein-coupled receptor; G-protein coupled receptor 126; ADGRG6 N-terminal fragment; ADGRG6-NTF; ADGRG6 C-terminal fragment; ADGRG6-CTF; |
The house mouse (Mus musculus) is a small mammal of the order Rodentia, characteristically having a pointed snout, small rounded ears, and a long naked or almost hairless tail. House mice thrive under a variety of conditions; they are found in and around homes and commercial structures, as well as in open fields and agricultural lands where they build underground gangways and nests.
Mus musculus is one of the most important model organisms in biology and medicine. Mice are biologically similar to humans and are thus good models for genetic diseases and research on the immune system.
The complete mouse reference genome was sequenced in 2002.
From left to right: i) The number of proteins in the reference proteome of Mus musculus, ii) the number of unique protein sequences for which at least one model is available, iii) the total number of models and iv) a coverage bar plot is shown.
The bar plot shows the coverage for every protein in the reference proteome of Mus musculus for which there is at least one model. Different colours (dark green to red boxes) represent the coverage of the targets. Targets with high coverage are represented in dark green (more than 80% of the target's length is covered by models), whereas low coverage is shown in red. The size of each box is proportional to the number of target sequences with a given coverage.
For information on the latest proteome for Mus musculus, please visit UniProtKB.
You can easily download the latest protein sequences for Mus musculus proteome here. Please note this download is for the current UniProtKB release, which may be different to release 2024_05 that was used for the most up to date SWISS-MODEL Repository.
| Proteins in proteome | Sequences modelled | Models |
| 21,759 | 18,967 | 43,897 |
Detailed coverage numbers are obtained by hovering the mouse over one of the boxes.
The plot shows the evolution over years (x-axis) of the fraction of Mus musculus reference proteome residues (y-axis) for which structural information is available. Different colors (light blue to dark blue) in the plot represent the quality of the sequence alignment between the reference proteome sequences (targets) and the sequences of the proteins in the structure database (templates). Alignments with low sequence identity are displayed in light blue, whereas alignments with high sequence identity are depicted in dark blue. The SWISS-MODEL Template Library is used as database of templates. Only target-template alignments found by HHblits and only residues with atom coordinates are considered.
This chart shows the percentage of residues in the Mus musculus proteome which are covered by experimental structures and the enhancement of coverage by homology modelling by the SWISS-MODEL pipeline. Experimental residue coverage is determined using SIFTS mapping. For residues which are not covered by experimental structures (including where there are no atom records in SIFTS mapping) the model coverage bars are coloured by QMEANDisCo local quality score.
Many proteins form oligomeric structures either by self-assembly (homo-oligomeric) or by assembly with other proteins (hetero-oligomeric) to accomplish their function. In SWISS-MODEL Repository, the quaternary structure annotation of the template is used to model the target sequence in its oligomeric form. Currently our method is limited to the modelling of homo-oligomeric assemblies. The oligomeric state of the template is only considered if the interface is conserved.
| Single Chain | 2-mer | 3-mer | 4-mer | 5-mer | 6-mer | 7-mer | 8-mer | 9-mer | 10-mer | 11-mer | 12-mer | 14-mer | 16-mer | 18-mer | 20-mer | 24-mer | 26-mer | 32-mer | 39-mer | 40-mer | 46-mer | 48-mer | 56-mer | 60-mer | 62-mer |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 39,969 | 2,821 | 266 | 528 | 42 | 98 | 17 | 37 | 2 | 13 | 3 | 37 | 4 | 14 | 2 | 1 | 22 | 1 | 1 | 1 | 5 | 1 | 1 | 1 | 7 | 3 |