Filter results by: Taxon Proteome
1 - 50 of 85916 UniProtKB matches
(94920 models, 41190 structures.)
UniProtKB AC
(Name)
UniProtKB Section
 
Homology Model
 
Experimental Structure
OrganismDescription
Q3U0L2
(AN33B_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Ankyrin repeat domain-containing protein 33B;
Q7TSY6
(CELF4_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
CUGBP Elav-like family member 4;
Bruno-like protein 4;
CUG-BP- and ETR-3-like factor 4;
RNA-binding protein BRUNOL-4;
Q8VEJ4
(NLE1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Notchless protein homolog 1;
Q99KZ6
(ZN639_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Zinc finger protein 639;
Zinc finger protein ZASC1;
Q91V09
(WDR13_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
WD repeat-containing protein 13;
Q8BMJ8
(SP8_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Transcription factor Sp8;
P97861
(KRT86_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Keratin, type II cuticular Hb6;
Keratin-86;
Type II hair keratin Hb6;
Type-II keratin Kb26;
P61211
(ARL1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
ADP-ribosylation factor-like protein 1;
P61205
(ARF3_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
ADP-ribosylation factor 3;
Q8BSL7
(ARF2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
ADP-ribosylation factor 2;
Q0VAX3
(FS2P1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Fatty acid desaturase 2-like protein FADS2B;
Fatty acid desaturase 2B, pseudogene;
Q8C2L6
(T161B_MOUSE)
Swiss-ProtMus musculus
(Mouse)
Transmembrane protein 161B;
Q3TQB2
(FXRD1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
FAD-dependent oxidoreductase domain-containing protein 1;
Q9JI11
(STK4_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Serine/threonine-protein kinase 4;
Mammalian STE20-like protein kinase 1;
STE20-like kinase MST1;
Serine/threonine-protein kinase 4 37kDa subunit;
MST1/N;
Serine/threonine-protein kinase 4 18kDa subunit;
MST1/C;
Q9JI38
(PUS3_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
tRNA pseudouridine(38/39) synthase;
tRNA pseudouridine synthase 3;
tRNA pseudouridylate synthase 3;
tRNA-uridine isomerase 3;
O89110
(CASP8_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Caspase-8;
Caspase-8 subunit p18;
Caspase-8 subunit p10;
Q148B6
(SPERI_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Speriolin;
Spermatogenesis and centriole-associated protein 1;
Spermatogenic cell-specific Cdc20-binding protein;
Q8C1Y8
(CCZ1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Vacuolar fusion protein CCZ1 homolog;
Q9DC63
(FBX3_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
F-box only protein 3;
Q8VC10
(OSGI1_MOUSE)
Swiss-ProtMus musculus
(Mouse)
Oxidative stress-induced growth inhibitor 1;
Q8BHA9
(PXYP1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
2-phosphoxylose phosphatase 1;
Acid phosphatase-like protein 2;
Q3TR54
(GSDC4_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Gasdermin-C4;
Gasdermin-C4, N-terminal;
GSDMC4-NT;
Gasdermin-C4, C-terminal;
GSDMC4-CT;
Q9R118
(HTRA1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Serine protease HTRA1;
High-temperature requirement A serine peptidase 1;
Serine protease 11;
Q9DAI2
(IFT22_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Intraflagellar transport protein 22 homolog;
Rab-like protein 5;
Q8VCA6
(T161A_MOUSE)
Swiss-ProtMus musculus
(Mouse)
Transmembrane protein 161A;
P56475
(GBRR1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Gamma-aminobutyric acid receptor subunit rho-1;
GABA(A) receptor subunit rho-1;
GABA(C) receptor;
P81068
(IRX1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Iroquois-class homeodomain protein IRX-1;
Homeodomain protein IRXA1;
Iroquois homeobox protein 1;
Q32M07
(KAD8_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Adenylate kinase 8;
ATP-AMP transphosphorylase 8;
Q3V384
(AFG1L_MOUSE)
Swiss-ProtMus musculus
(Mouse)
AFG1-like ATPase;
Lactation elevated protein 1;
O35732
(CFLAR_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
CASP8 and FADD-like apoptosis regulator;
Caspase homolog;
Caspase-eight-related protein;
Caspase-like apoptosis regulatory protein;
Cellular FLICE-like inhibitory protein;
FADD-like antiapoptotic molecule 1;
Inhibitor of FLICE;
MACH-related inducer of toxicity;
Usurpin;
CASP8 and FADD-like apoptosis regulator subunit p43;
CASP8 and FADD-like apoptosis regulator subunit p12;
P32921
(SYWC_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Tryptophan--tRNA ligase, cytoplasmic;
Tryptophanyl-tRNA synthetase;
T1-TrpRS;
T2-TrpRS;
Q80XS7
(FA83E_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Protein FAM83E;
P01896
(HA1Z_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
H-2 class I histocompatibility antigen, alpha chain;
Clone PH-2D-2;
Q9Z2L6
(MINP1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Multiple inositol polyphosphate phosphatase 1;
2,3-bisphosphoglycerate 3-phosphatase;
Q6DFW0
(CI072_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Guanine nucleotide exchange factor C9orf72 homolog;
Q60987
(FOXG1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Forkhead box protein G1;
Brain factor 1;
Forkhead-related protein FKHL1;
Q811M1
(RHG15_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Rho GTPase-activating protein 15;
ArhGAP15;
Rho-type GTPase-activating protein 15;
Q5F2L2
(OFUT3_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
GDP-fucose protein O-fucosyltransferase 3;
Alpha-(1,3)-fucosyltransferase 10;
Fucosyltransferase X;
Galactoside 3-L-fucosyltransferase 10;
Q8BYH3
(TRM13_MOUSE)
Swiss-ProtMus musculus
(Mouse)
tRNA:m(4)X modification enzyme TRM13 homolog;
Coiled-coil domain-containing protein 76;
Q2KHK6
(GSDC2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Gasdermin-C2;
Gasdermin-C2, N-terminal;
GSDMC2-NT;
Gasdermin-C2, C-terminal;
GSDMC2-CT;
Q05A56
(HYAL4_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Hyaluronidase-4;
Chondroitin sulfate endo-beta-N-acetylgalactosaminidase;
Chondroitin sulfate hydrolase;
Hyaluronoglucosaminidase-4;
Q99JG2
(G37L1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
G-protein coupled receptor 37-like 1;
Endothelin B receptor-like protein 2;
Q8VCC6
(CCM2L_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Cerebral cavernous malformations 2 protein-like;
O35701
(MATN3_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Matrilin-3;
Q61805
(LBP_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Lipopolysaccharide-binding protein;
Q9QYZ4
(SMOK1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Sperm motility kinase 1;
Q9QYZ3
(SMK2B_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Sperm motility kinase 2B;
P54822
(PUR8_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Adenylosuccinate lyase;
Adenylosuccinase;
A2KF29
(SMKTR_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Sperm motility kinase Tcr mutant form;
Dominant negative form of Smok;
Responder protein Smok-Tcr;
P47740
(AL3A2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Aldehyde dehydrogenase family 3 member A2;
Aldehyde dehydrogenase 3;
Fatty aldehyde dehydrogenase;
1 - 50 of 85916
Mus musculus (Mouse)

The house mouse (Mus musculus) is a small mammal of the order Rodentia, characteristically having a pointed snout, small rounded ears, and a long naked or almost hairless tail. House mice thrive under a variety of conditions; they are found in and around homes and commercial structures, as well as in open fields and agricultural lands where they build underground gangways and nests.

Mus musculus is one of the most important model organisms in biology and medicine. Mice are biologically similar to humans and are thus good models for genetic diseases and research on the immune system.

The complete mouse reference genome was sequenced in 2002.

"Mus musculus", Wikipedia: The Free Encyclopedia

Protein models in Repository

From left to right: i) The number of proteins in the reference proteome of Mus musculus, ii) the number of unique protein sequences for which at least one model is available, iii) the total number of models and iv) a coverage bar plot is shown.
The bar plot shows the coverage for every protein in the reference proteome of Mus musculus for which there is at least one model. Different colours (dark green to red boxes) represent the coverage of the targets. Targets with high coverage are represented in dark green (more than 80% of the target's length is covered by models), whereas low coverage is shown in red. The size of each box is proportional to the number of target sequences with a given coverage.

For information on the latest proteome for Mus musculus, please visit UniProtKB.

You can easily download the latest protein sequences for Mus musculus proteome here. Please note this download is for the current UniProtKB release, which may be different to release 2025_03 that was used for the most up to date SWISS-MODEL Repository.

Proteins in proteomeSequences modelledModels
21,80319,10343,738

Detailed coverage numbers are obtained by hovering the mouse over one of the boxes.

Structural Coverage

The plot shows the evolution over years (x-axis) of the fraction of Mus musculus reference proteome residues (y-axis) for which structural information is available. Different colors (light blue to dark blue) in the plot represent the quality of the sequence alignment between the reference proteome sequences (targets) and the sequences of the proteins in the structure database (templates). Alignments with low sequence identity are displayed in light blue, whereas alignments with high sequence identity are depicted in dark blue. The SWISS-MODEL Template Library is used as database of templates. Only target-template alignments found by HHblits and only residues with atom coordinates are considered.

Residue Coverage

This chart shows the percentage of residues in the Mus musculus proteome which are covered by experimental structures and the enhancement of coverage by homology modelling by the SWISS-MODEL pipeline. Experimental residue coverage is determined using SIFTS mapping. For residues which are not covered by experimental structures (including where there are no atom records in SIFTS mapping) the model coverage bars are coloured by QMEANDisCo local quality score.

Oligomeric State

Many proteins form oligomeric structures either by self-assembly (homo-oligomeric) or by assembly with other proteins (hetero-oligomeric) to accomplish their function. In SWISS-MODEL Repository, the quaternary structure annotation of the template is used to model the target sequence in its oligomeric form. Currently our method is limited to the modelling of homo-oligomeric assemblies. The oligomeric state of the template is only considered if the interface is conserved.

Single Chain2-mer3-mer4-mer5-mer6-mer7-mer8-mer9-mer10-mer11-mer12-mer14-mer16-mer18-mer20-mer21-mer24-mer25-mer32-mer34-mer36-mer39-mer40-mer44-mer46-mer48-mer60-mer62-mer
38,9153,43929865659144215022184741433118411117114113
Download