UniProtKB AC (Name) | UniProtKB Section | Organism | Description | |
---|---|---|---|---|
Q6P4U0 (THS7B_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Thrombospondin type-1 domain-containing protein 7B; | |
Q3V0F0 (RIMB3_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | RIMS-binding protein 3; | |
Q7TPD1 (FBX11_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | F-box only protein 11; | |
Q9DAL0 (SIM23_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Small integral membrane protein 23; | |
P0CW03 (LY6C2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Lymphocyte antigen 6C2; | |
Q91WJ7 (SPS2L_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | SPATS2-like protein; | |
P60670 (NPL4_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Nuclear protein localization protein 4 homolog; | |
Q8K1B9 (GLT18_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Polypeptide N-acetylgalactosaminyltransferase 18; Polypeptide GalNAc transferase 18; Polypeptide GalNAc transferase-like protein 4; Polypeptide N-acetylgalactosaminyltransferase-like protein 4; Protein-UDP acetylgalactosaminyltransferase-like protein 4; UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase-like protein 4; | |
Q9JI33 (NET4_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Netrin-4; Beta-netrin; | |
Q8VE11 (MTMR6_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Phosphatidylinositol-3,5-bisphosphate 3-phosphatase MTMR6; Myotubularin-related protein 6; Phosphatidylinositol-3-phosphate phosphatase; | |
O88935 (SYN1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Synapsin-1; Synapsin I; | |
Q9QXS6 (DREB_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Drebrin; Developmentally-regulated brain protein; | |
Q6R3M4 (POLI_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | DNA polymerase iota; Rad30 homolog B; | |
Q6ZWY9 (H2B1C_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Histone H2B type 1-C/E/G; | |
Q6PDJ6 (FBX42_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | F-box only protein 42; | |
Q9Z2X8 (KEAP1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Kelch-like ECH-associated protein 1; Cytosolic inhibitor of Nrf2; | |
Q9D478 (ODF2L_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Protein BCAP; Basal body centriole-associated protein; Outer dense fiber protein 2-like; | |
Q8C8H8 (KY_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Kyphoscoliosis peptidase; | |
Q3V1H1 (CKAP2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Cytoskeleton-associated protein 2; | |
P01645 (KV5AC_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Ig kappa chain V-V region HP 93G7; | |
P01646 (KV5AD_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Ig kappa chain V-V region HP 123E6; | |
P01650 (KV5AH_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Immunoglobulin kappa variable 11-125; Ig kappa chain V-V region UPC 61; | |
P01636 (KV5A4_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Ig kappa chain V-V region MOPC 149; | |
E9Q9R3 (FIMP_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Fertilization-influencing membrane protein; | |
P69525 (TMPS9_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Transmembrane protease serine 9; Polyserase-I; Polyserine protease 1; Serase-1; Serase-2; Serase-3; | |
Q9JKR6 (HYOU1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Hypoxia up-regulated protein 1; 140 kDa Ca(2+)-binding protein; | |
Q60597 (ODO1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | 2-oxoglutarate dehydrogenase complex component E1; 2-oxoglutarate dehydrogenase, mitochondrial; Alpha-ketoglutarate dehydrogenase; Thiamine diphosphate (ThDP)-dependent 2-oxoglutarate dehydrogenase; | |
O54931 (AKAP2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | PALM2-AKAP2 fusion protein; A-kinase anchor protein 2; AKAP expressed in kidney and lung; Paralemmin A kinase anchor protein; Paralemmin-2; Protein kinase A-anchoring protein 2; | |
Q6ZPS6 (AKIB1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Ankyrin repeat and IBR domain-containing protein 1; | |
P12382 (PFKAL_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | ATP-dependent 6-phosphofructokinase, liver type; 6-phosphofructokinase type B; Phosphofructo-1-kinase isozyme B; Phosphohexokinase; | |
Q9Z2G6 (SE1L1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Protein sel-1 homolog 1; Suppressor of lin-12-like protein 1; | |
Q9Z1J2 (NEK4_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Serine/threonine-protein kinase Nek4; Never in mitosis A-related kinase 4; Serine/threonine-protein kinase 2; | |
Q63871 (RPAB4_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | DNA-directed RNA polymerases I, II, and III subunit RPABC4; DNA-directed RNA polymerase II subunit K; Metallothionein-I gene transcription activator; RPB10alpha; | |
Q8VG02 (O5P64_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Olfactory receptor 5P64; Olfactory receptor 204-15; Olfactory receptor 488; | |
Q8VEW5 (O5P68_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Olfactory receptor 5P68; Olfactory receptor 204-35; Olfactory receptor 493; | |
Q91XB0 (TREX1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Three-prime repair exonuclease 1; 3'-5' exonuclease TREX1; | |
Q8VG09 (O5P76_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Olfactory receptor 5P76; Olfactory receptor 204-8; Olfactory receptor 502; | |
O35690 (PHX2B_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Paired mesoderm homeobox protein 2B; Neuroblastoma Phox; PHOX2B homeodomain protein; Paired-like homeobox 2B; | |
Q04857 (CO6A1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Collagen alpha-1(VI) chain; | |
P11610 (CD1D2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Antigen-presenting glycoprotein CD1d2; CD1d.2; | |
Q569E4 (MENT_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Protein MENT; Methylated in normal thymocytes protein; | |
P70224 (GIMA1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | GTPase IMAP family member 1; Immune-associated protein 38; Immunity-associated protein 1; | |
Q38HM4 (TRI63_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | E3 ubiquitin-protein ligase TRIM63; Muscle-specific RING finger protein 1; RING-type E3 ubiquitin transferase TRIM63; Tripartite motif-containing protein 63; | |
Q9D4C6 (LR2BP_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | LRP2-binding protein; | |
P15499 (PRPH2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Peripherin-2; Retinal degeneration slow protein; | |
E9PUL5 (PRRT2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Proline-rich transmembrane protein 2; Dispanin subfamily B member 3; | |
Q9R226 (KHDR3_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | KH domain-containing, RNA-binding, signal transduction-associated protein 3; RNA-binding protein Etoile; Sam68-like mammalian protein 2; | |
Q8QZR4 (OAF_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Out at first protein homolog; | |
Q8R1U2 (CGRE1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Cell growth regulator with EF hand domain protein 1; Cell growth regulatory gene 11 protein; Hydrophobestin; | |
P49183 (DNAS1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Deoxyribonuclease-1; Deoxyribonuclease I; |
The house mouse (Mus musculus) is a small mammal of the order Rodentia, characteristically having a pointed snout, small rounded ears, and a long naked or almost hairless tail. House mice thrive under a variety of conditions; they are found in and around homes and commercial structures, as well as in open fields and agricultural lands where they build underground gangways and nests.
Mus musculus is one of the most important model organisms in biology and medicine. Mice are biologically similar to humans and are thus good models for genetic diseases and research on the immune system.
The complete mouse reference genome was sequenced in 2002.
From left to right: i) The number of proteins in the reference proteome of Mus musculus, ii) the number of unique protein sequences for which at least one model is available, iii) the total number of models and iv) a coverage bar plot is shown.
The bar plot shows the coverage for every protein in the reference proteome of Mus musculus for which there is at least one model. Different colours (dark green to red boxes) represent the coverage of the targets. Targets with high coverage are represented in dark green (more than 80% of the target's length is covered by models), whereas low coverage is shown in red. The size of each box is proportional to the number of target sequences with a given coverage.
For information on the latest proteome for Mus musculus, please visit UniProtKB.
You can easily download the latest protein sequences for Mus musculus proteome here. Please note this download is for the current UniProtKB release, which may be different to release 2025_01 that was used for the most up to date SWISS-MODEL Repository.
Proteins in proteome | Sequences modelled | Models |
21,755 | 19,041 | 43,690 |
Detailed coverage numbers are obtained by hovering the mouse over one of the boxes.
The plot shows the evolution over years (x-axis) of the fraction of Mus musculus reference proteome residues (y-axis) for which structural information is available. Different colors (light blue to dark blue) in the plot represent the quality of the sequence alignment between the reference proteome sequences (targets) and the sequences of the proteins in the structure database (templates). Alignments with low sequence identity are displayed in light blue, whereas alignments with high sequence identity are depicted in dark blue. The SWISS-MODEL Template Library is used as database of templates. Only target-template alignments found by HHblits and only residues with atom coordinates are considered.
This chart shows the percentage of residues in the Mus musculus proteome which are covered by experimental structures and the enhancement of coverage by homology modelling by the SWISS-MODEL pipeline. Experimental residue coverage is determined using SIFTS mapping. For residues which are not covered by experimental structures (including where there are no atom records in SIFTS mapping) the model coverage bars are coloured by QMEANDisCo local quality score.
Many proteins form oligomeric structures either by self-assembly (homo-oligomeric) or by assembly with other proteins (hetero-oligomeric) to accomplish their function. In SWISS-MODEL Repository, the quaternary structure annotation of the template is used to model the target sequence in its oligomeric form. Currently our method is limited to the modelling of homo-oligomeric assemblies. The oligomeric state of the template is only considered if the interface is conserved.
Single Chain | 2-mer | 3-mer | 4-mer | 5-mer | 6-mer | 7-mer | 8-mer | 9-mer | 10-mer | 11-mer | 12-mer | 14-mer | 16-mer | 18-mer | 20-mer | 21-mer | 24-mer | 25-mer | 34-mer | 36-mer | 39-mer | 40-mer | 44-mer | 46-mer | 48-mer | 60-mer | 62-mer |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
38,845 | 3,484 | 292 | 631 | 61 | 141 | 19 | 55 | 2 | 24 | 8 | 47 | 5 | 15 | 2 | 3 | 1 | 20 | 4 | 1 | 1 | 2 | 7 | 1 | 1 | 4 | 11 | 3 |