UniProtKB AC (Name) | UniProtKB Section | Organism | Description | |
---|---|---|---|---|
Q80XL7 (MPPE1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Metallophosphoesterase 1; Post-GPI attachment to proteins factor 5; | |
Q61216 (MRE11_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Double-strand break repair protein MRE11; Meiotic recombination 11 homolog 1; Meiotic recombination 11 homolog A; | |
Q02395 (MTF2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Metal-response element-binding transcription factor 2; Metal regulatory transcription factor 2; Metal-response element DNA-binding protein M96; Polycomb-like protein 2; Zinc-regulated factor 1; | |
Q9QYI5 (DNJB2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | DnaJ homolog subfamily B member 2; DnaJ homolog subfamily B member 10; mDj8; | |
Q2MHE5 (DOK6_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Docking protein 6; Downstream of tyrosine kinase 6; | |
Q9CZR8 (EFTS_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Elongation factor Ts, mitochondrial; | |
Q9JHC9 (ELF2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | ETS-related transcription factor Elf-2; E74-like factor 2; New ETS-related factor; | |
Q9WUZ9 (ENTP5_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Ectonucleoside triphosphate diphosphohydrolase 5; CD39 antigen-like 4; ER-UDPase; Guanosine-diphosphatase ENTPD5; Nucleoside diphosphatase; Uridine-diphosphatase ENTPD5; | |
P54763 (EPHB2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Ephrin type-B receptor 2; Neural kinase; Nuk receptor tyrosine kinase; Tyrosine-protein kinase receptor EPH-3; Tyrosine-protein kinase receptor SEK-3; EphB2/CTF1; EphB2/CTF2; | |
P97767 (EYA1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Protein phosphatase EYA1; Eyes absent homolog 1; | |
Q8BYI8 (F234B_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Protein FAM234B; | |
B2RRE7 (OTUD4_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | OTU domain-containing protein 4; | |
Q8CFF0 (PAR11_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Protein mono-ADP-ribosyltransferase PARP11; ADP-ribosyltransferase diphtheria toxin-like 11; Poly [ADP-ribose] polymerase 11; | |
Q9Z2J6 (PD2R2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Prostaglandin D2 receptor 2; Chemoattractant receptor-homologous molecule expressed on Th2 cells; G-protein coupled receptor 44; CD294; | |
Q64338 (PDE1C_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C; | |
Q9JK42 (PDK2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, mitochondrial; Pyruvate dehydrogenase kinase isoform 2; | |
Q62053 (PE2R2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Prostaglandin E2 receptor EP2 subtype; Prostanoid EP2 receptor; | |
Q91ZF2 (CAT7_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Cathepsin 7; Cathepsin 1; | |
Q8VBX4 (CLC4K_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | C-type lectin domain family 4 member K; Langerin; CD207; | |
Q8K158 (CNPD1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Protein CNPPD1; | |
Q8VC74 (COX18_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Cytochrome c oxidase assembly protein COX18, mitochondrial; | |
P28776 (I23O1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Indoleamine 2,3-dioxygenase 1; Indoleamine-pyrrole 2,3-dioxygenase; | |
P26952 (IL3RA_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Interleukin-3 receptor subunit alpha; Interleukin-3 receptor class II alpha chain; CD123; | |
P49442 (INPP_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Inositol polyphosphate 1-phosphatase; | |
Q5DTY9 (KCD16_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | BTB/POZ domain-containing protein KCTD16; | |
Q8K1Z6 (GPR18_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | N-arachidonyl glycine receptor; G-protein coupled receptor 18; | |
Q8R1W2 (GSG1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Germ cell-specific gene 1 protein; Germ cell-associated protein 1; | |
Q8K2C9 (HACD3_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3; 3-hydroxyacyl-CoA dehydratase 3; Butyrate-induced protein 1; Protein-tyrosine phosphatase-like A domain-containing protein 1; | |
O70577 (S22A2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Solute carrier family 22 member 2; Organic cation transporter 2; | |
Q9QZ03 (S39A1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Zinc transporter ZIP1; Solute carrier family 39 member 1; Zinc-iron-regulated transporter-like; Zrt- and Irt-like protein 1; | |
Q9CY58 (SERB1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | SERPINE1 mRNA-binding protein 1; PAI1 RNA-binding protein 1; Plasminogen activator inhibitor 1 RNA-binding protein; | |
Q61711 (SIAL_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Integrin-binding sialoprotein; Bone sialoprotein 2; Bone sialoprotein II; Cell-binding sialoprotein; | |
Q9D2C9 (SNPC3_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | snRNA-activating protein complex subunit 3; Small nuclear RNA-activating complex polypeptide 3; | |
E9PWZ3 (RL3L_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Large ribosomal subunit protein uL3-like; 60S ribosomal protein L3-like; | |
Q3UHJ8 (RNF44_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | RING finger protein 44; | |
Q9Z139 (ROR1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Inactive tyrosine-protein kinase transmembrane receptor ROR1; Neurotrophic tyrosine kinase, receptor-related 1; | |
Q9R0X5 (RPGR_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | X-linked retinitis pigmentosa GTPase regulator; | |
Q9D020 (5NT3A_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Cytosolic 5'-nucleotidase 3A; 7-methylguanosine phosphate-specific 5'-nucleotidase; Cytosolic 5'-nucleotidase 3; Cytosolic 5'-nucleotidase III; Lupin; Pyrimidine 5'-nucleotidase 1; | |
Q8BM81 (AD4F1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Arylacetamide deacetylase-like 4 family member 1; AADACL4 family member 1; | |
Q9JKV1 (ADRM1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Proteasomal ubiquitin receptor ADRM1; 110 kDa cell membrane glycoprotein; Adhesion-regulating molecule 1; Rpn13 homolog; | |
Q8BGT5 (ALAT2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Alanine aminotransferase 2; Glutamate pyruvate transaminase 2; Glutamic--alanine transaminase 2; Glutamic--pyruvic transaminase 2; | |
O55189 (AMBN_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Ameloblastin; | |
Q569N2 (ANR37_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Ankyrin repeat domain-containing protein 37; | |
Q8BZ64 (TECT1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Tectonic-1; | |
Q8VCZ3 (THAP7_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | THAP domain-containing protein 7; | |
Q80Z37 (TOPRS_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | E3 ubiquitin-protein ligase Topors; RING-type E3 ubiquitin transferase Topors; SUMO1-protein E3 ligase Topors; Topoisomerase I-binding RING finger protein; Topoisomerase I-binding arginine/serine-rich protein; Tumor suppressor p53-binding protein 3; | |
Q7M722 (TR114_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Taste receptor type 2 member 114; | |
Q8CBC7 (TRM7_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; 2'-O-ribose RNA methyltransferase TRM7 homolog; Protein ftsJ homolog 1; | |
Q91WG3 (TRUB2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Pseudouridylate synthase TRUB2, mitochondrial; TruB pseudouridine synthase homolog 2; tRNA pseudouridine 55 synthase TRUB2; | |
P18653 (KS6A1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Ribosomal protein S6 kinase alpha-1; 90 kDa ribosomal protein S6 kinase 1; MAP kinase-activated protein kinase 1a; Ribosomal S6 kinase 1; |
The house mouse (Mus musculus) is a small mammal of the order Rodentia, characteristically having a pointed snout, small rounded ears, and a long naked or almost hairless tail. House mice thrive under a variety of conditions; they are found in and around homes and commercial structures, as well as in open fields and agricultural lands where they build underground gangways and nests.
Mus musculus is one of the most important model organisms in biology and medicine. Mice are biologically similar to humans and are thus good models for genetic diseases and research on the immune system.
The complete mouse reference genome was sequenced in 2002.
From left to right: i) The number of proteins in the reference proteome of Mus musculus, ii) the number of unique protein sequences for which at least one model is available, iii) the total number of models and iv) a coverage bar plot is shown.
The bar plot shows the coverage for every protein in the reference proteome of Mus musculus for which there is at least one model. Different colours (dark green to red boxes) represent the coverage of the targets. Targets with high coverage are represented in dark green (more than 80% of the target's length is covered by models), whereas low coverage is shown in red. The size of each box is proportional to the number of target sequences with a given coverage.
For information on the latest proteome for Mus musculus, please visit UniProtKB.
You can easily download the latest protein sequences for Mus musculus proteome here. Please note this download is for the current UniProtKB release, which may be different to release 2025_02 that was used for the most up to date SWISS-MODEL Repository.
Proteins in proteome | Sequences modelled | Models |
21,756 | 19,071 | 44,770 |
Detailed coverage numbers are obtained by hovering the mouse over one of the boxes.
The plot shows the evolution over years (x-axis) of the fraction of Mus musculus reference proteome residues (y-axis) for which structural information is available. Different colors (light blue to dark blue) in the plot represent the quality of the sequence alignment between the reference proteome sequences (targets) and the sequences of the proteins in the structure database (templates). Alignments with low sequence identity are displayed in light blue, whereas alignments with high sequence identity are depicted in dark blue. The SWISS-MODEL Template Library is used as database of templates. Only target-template alignments found by HHblits and only residues with atom coordinates are considered.
This chart shows the percentage of residues in the Mus musculus proteome which are covered by experimental structures and the enhancement of coverage by homology modelling by the SWISS-MODEL pipeline. Experimental residue coverage is determined using SIFTS mapping. For residues which are not covered by experimental structures (including where there are no atom records in SIFTS mapping) the model coverage bars are coloured by QMEANDisCo local quality score.
Many proteins form oligomeric structures either by self-assembly (homo-oligomeric) or by assembly with other proteins (hetero-oligomeric) to accomplish their function. In SWISS-MODEL Repository, the quaternary structure annotation of the template is used to model the target sequence in its oligomeric form. Currently our method is limited to the modelling of homo-oligomeric assemblies. The oligomeric state of the template is only considered if the interface is conserved.
Single Chain | 2-mer | 3-mer | 4-mer | 5-mer | 6-mer | 7-mer | 8-mer | 9-mer | 10-mer | 11-mer | 12-mer | 14-mer | 16-mer | 18-mer | 20-mer | 21-mer | 24-mer | 25-mer | 32-mer | 34-mer | 36-mer | 39-mer | 40-mer | 44-mer | 46-mer | 48-mer | 60-mer | 62-mer |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
39,811 | 3,540 | 300 | 672 | 64 | 142 | 22 | 51 | 2 | 22 | 10 | 52 | 5 | 16 | 2 | 3 | 1 | 18 | 4 | 2 | 1 | 1 | 1 | 7 | 1 | 1 | 4 | 12 | 3 |