Filter results by: Taxon Proteome
1 - 50 of 85871 UniProtKB matches
(97967 models, 38834 structures.)
UniProtKB AC
(Name)
UniProtKB Section
 
Homology Model
 
Experimental Structure
OrganismDescription
Q6P4U0
(THS7B_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Thrombospondin type-1 domain-containing protein 7B;
Q3V0F0
(RIMB3_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
RIMS-binding protein 3;
Q7TPD1
(FBX11_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
F-box only protein 11;
Q9DAL0
(SIM23_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Small integral membrane protein 23;
P0CW03
(LY6C2_MOUSE)
Swiss-ProtMus musculus
(Mouse)
Lymphocyte antigen 6C2;
Q91WJ7
(SPS2L_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
SPATS2-like protein;
P60670
(NPL4_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Nuclear protein localization protein 4 homolog;
Q8K1B9
(GLT18_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Polypeptide N-acetylgalactosaminyltransferase 18;
Polypeptide GalNAc transferase 18;
Polypeptide GalNAc transferase-like protein 4;
Polypeptide N-acetylgalactosaminyltransferase-like protein 4;
Protein-UDP acetylgalactosaminyltransferase-like protein 4;
UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase-like protein 4;
Q9JI33
(NET4_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Netrin-4;
Beta-netrin;
Q8VE11
(MTMR6_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Phosphatidylinositol-3,5-bisphosphate 3-phosphatase MTMR6;
Myotubularin-related protein 6;
Phosphatidylinositol-3-phosphate phosphatase;
O88935
(SYN1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Synapsin-1;
Synapsin I;
Q9QXS6
(DREB_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Drebrin;
Developmentally-regulated brain protein;
Q6R3M4
(POLI_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
DNA polymerase iota;
Rad30 homolog B;
Q6ZWY9
(H2B1C_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Histone H2B type 1-C/E/G;
Q6PDJ6
(FBX42_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
F-box only protein 42;
Q9Z2X8
(KEAP1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Kelch-like ECH-associated protein 1;
Cytosolic inhibitor of Nrf2;
Q9D478
(ODF2L_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Protein BCAP;
Basal body centriole-associated protein;
Outer dense fiber protein 2-like;
Q8C8H8
(KY_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Kyphoscoliosis peptidase;
Q3V1H1
(CKAP2_MOUSE)
Swiss-ProtMus musculus
(Mouse)
Cytoskeleton-associated protein 2;
P01645
(KV5AC_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Ig kappa chain V-V region HP 93G7;
P01646
(KV5AD_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Ig kappa chain V-V region HP 123E6;
P01650
(KV5AH_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Immunoglobulin kappa variable 11-125;
Ig kappa chain V-V region UPC 61;
P01636
(KV5A4_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Ig kappa chain V-V region MOPC 149;
E9Q9R3
(FIMP_MOUSE)
Swiss-ProtMus musculus
(Mouse)
Fertilization-influencing membrane protein;
P69525
(TMPS9_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Transmembrane protease serine 9;
Polyserase-I;
Polyserine protease 1;
Serase-1;
Serase-2;
Serase-3;
Q9JKR6
(HYOU1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Hypoxia up-regulated protein 1;
140 kDa Ca(2+)-binding protein;
Q60597
(ODO1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
2-oxoglutarate dehydrogenase complex component E1;
2-oxoglutarate dehydrogenase, mitochondrial;
Alpha-ketoglutarate dehydrogenase;
Thiamine diphosphate (ThDP)-dependent 2-oxoglutarate dehydrogenase;
O54931
(AKAP2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
PALM2-AKAP2 fusion protein;
A-kinase anchor protein 2;
AKAP expressed in kidney and lung;
Paralemmin A kinase anchor protein;
Paralemmin-2;
Protein kinase A-anchoring protein 2;
Q6ZPS6
(AKIB1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Ankyrin repeat and IBR domain-containing protein 1;
P12382
(PFKAL_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
ATP-dependent 6-phosphofructokinase, liver type;
6-phosphofructokinase type B;
Phosphofructo-1-kinase isozyme B;
Phosphohexokinase;
Q9Z2G6
(SE1L1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Protein sel-1 homolog 1;
Suppressor of lin-12-like protein 1;
Q9Z1J2
(NEK4_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Serine/threonine-protein kinase Nek4;
Never in mitosis A-related kinase 4;
Serine/threonine-protein kinase 2;
Q63871
(RPAB4_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
DNA-directed RNA polymerases I, II, and III subunit RPABC4;
DNA-directed RNA polymerase II subunit K;
Metallothionein-I gene transcription activator;
RPB10alpha;
Q8VG02
(O5P64_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Olfactory receptor 5P64;
Olfactory receptor 204-15;
Olfactory receptor 488;
Q8VEW5
(O5P68_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Olfactory receptor 5P68;
Olfactory receptor 204-35;
Olfactory receptor 493;
Q91XB0
(TREX1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Three-prime repair exonuclease 1;
3'-5' exonuclease TREX1;
Q8VG09
(O5P76_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Olfactory receptor 5P76;
Olfactory receptor 204-8;
Olfactory receptor 502;
O35690
(PHX2B_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Paired mesoderm homeobox protein 2B;
Neuroblastoma Phox;
PHOX2B homeodomain protein;
Paired-like homeobox 2B;
Q04857
(CO6A1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Collagen alpha-1(VI) chain;
P11610
(CD1D2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Antigen-presenting glycoprotein CD1d2;
CD1d.2;
Q569E4
(MENT_MOUSE)
Swiss-ProtMus musculus
(Mouse)
Protein MENT;
Methylated in normal thymocytes protein;
P70224
(GIMA1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
GTPase IMAP family member 1;
Immune-associated protein 38;
Immunity-associated protein 1;
Q38HM4
(TRI63_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
E3 ubiquitin-protein ligase TRIM63;
Muscle-specific RING finger protein 1;
RING-type E3 ubiquitin transferase TRIM63;
Tripartite motif-containing protein 63;
Q9D4C6
(LR2BP_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
LRP2-binding protein;
P15499
(PRPH2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Peripherin-2;
Retinal degeneration slow protein;
E9PUL5
(PRRT2_MOUSE)
Swiss-ProtMus musculus
(Mouse)
Proline-rich transmembrane protein 2;
Dispanin subfamily B member 3;
Q9R226
(KHDR3_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
KH domain-containing, RNA-binding, signal transduction-associated protein 3;
RNA-binding protein Etoile;
Sam68-like mammalian protein 2;
Q8QZR4
(OAF_MOUSE)
Swiss-ProtMus musculus
(Mouse)
Out at first protein homolog;
Q8R1U2
(CGRE1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Cell growth regulator with EF hand domain protein 1;
Cell growth regulatory gene 11 protein;
Hydrophobestin;
P49183
(DNAS1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Deoxyribonuclease-1;
Deoxyribonuclease I;
1 - 50 of 85871
Mus musculus (Mouse)

The house mouse (Mus musculus) is a small mammal of the order Rodentia, characteristically having a pointed snout, small rounded ears, and a long naked or almost hairless tail. House mice thrive under a variety of conditions; they are found in and around homes and commercial structures, as well as in open fields and agricultural lands where they build underground gangways and nests.

Mus musculus is one of the most important model organisms in biology and medicine. Mice are biologically similar to humans and are thus good models for genetic diseases and research on the immune system.

The complete mouse reference genome was sequenced in 2002.

"Mus musculus", Wikipedia: The Free Encyclopedia

Protein models in Repository

From left to right: i) The number of proteins in the reference proteome of Mus musculus, ii) the number of unique protein sequences for which at least one model is available, iii) the total number of models and iv) a coverage bar plot is shown.
The bar plot shows the coverage for every protein in the reference proteome of Mus musculus for which there is at least one model. Different colours (dark green to red boxes) represent the coverage of the targets. Targets with high coverage are represented in dark green (more than 80% of the target's length is covered by models), whereas low coverage is shown in red. The size of each box is proportional to the number of target sequences with a given coverage.

For information on the latest proteome for Mus musculus, please visit UniProtKB.

You can easily download the latest protein sequences for Mus musculus proteome here. Please note this download is for the current UniProtKB release, which may be different to release 2025_01 that was used for the most up to date SWISS-MODEL Repository.

Proteins in proteomeSequences modelledModels
21,75519,04143,690

Detailed coverage numbers are obtained by hovering the mouse over one of the boxes.

Structural Coverage

The plot shows the evolution over years (x-axis) of the fraction of Mus musculus reference proteome residues (y-axis) for which structural information is available. Different colors (light blue to dark blue) in the plot represent the quality of the sequence alignment between the reference proteome sequences (targets) and the sequences of the proteins in the structure database (templates). Alignments with low sequence identity are displayed in light blue, whereas alignments with high sequence identity are depicted in dark blue. The SWISS-MODEL Template Library is used as database of templates. Only target-template alignments found by HHblits and only residues with atom coordinates are considered.

Residue Coverage

This chart shows the percentage of residues in the Mus musculus proteome which are covered by experimental structures and the enhancement of coverage by homology modelling by the SWISS-MODEL pipeline. Experimental residue coverage is determined using SIFTS mapping. For residues which are not covered by experimental structures (including where there are no atom records in SIFTS mapping) the model coverage bars are coloured by QMEANDisCo local quality score.

Oligomeric State

Many proteins form oligomeric structures either by self-assembly (homo-oligomeric) or by assembly with other proteins (hetero-oligomeric) to accomplish their function. In SWISS-MODEL Repository, the quaternary structure annotation of the template is used to model the target sequence in its oligomeric form. Currently our method is limited to the modelling of homo-oligomeric assemblies. The oligomeric state of the template is only considered if the interface is conserved.

Single Chain2-mer3-mer4-mer5-mer6-mer7-mer8-mer9-mer10-mer11-mer12-mer14-mer16-mer18-mer20-mer21-mer24-mer25-mer34-mer36-mer39-mer40-mer44-mer46-mer48-mer60-mer62-mer
38,8453,4842926316114119552248475152312041127114113
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