UniProtKB AC (Name) | UniProtKB Section | Organism | Description | |
---|---|---|---|---|
Q3UVL4 (VPS51_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Vacuolar protein sorting-associated protein 51 homolog; Protein fat-free homolog; | |
P20918 (PLMN_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Plasminogen; Plasmin heavy chain A; Activation peptide; Angiostatin; Plasmin heavy chain A, short form; Plasmin light chain B; | |
Q8C9X6 (EPC1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Enhancer of polycomb homolog 1; | |
O55230 (RA51D_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | DNA repair protein RAD51 homolog 4; R51H3; RAD51 homolog D; RAD51-like protein 3; | |
Q9DAL3 (CCD54_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Coiled-coil domain-containing protein 54; | |
Q9R060 (NUBP1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Cytosolic Fe-S cluster assembly factor NUBP1; Nucleotide-binding protein 1; | |
Q6NWV3 (IF122_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Intraflagellar transport protein 122 homolog; WD repeat-containing protein 10; | |
Q9QZS7 (NPHN_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Nephrin; Renal glomerulus-specific cell adhesion receptor; | |
Q6PHS9 (CA2D2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Voltage-dependent calcium channel subunit alpha-2/delta-2; Protein ducky; Voltage-gated calcium channel subunit alpha-2/delta-2; Voltage-dependent calcium channel subunit alpha-2-2; Voltage-dependent calcium channel subunit delta-2; | |
B2RX88 (CSPP1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Centrosome and spindle pole associated protein 1; | |
Q0GKD5 (NL1B5_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | NACHT, LRR and PYD domains-containing protein 1b allele 5; NACHT, LRR and PYD domains-containing protein 1b, C-terminus; Nlrp1b1-CT; NACHT, LRR and PYD domains-containing protein 1b, N-terminus; Nlrp1b1-NT; | |
O54827 (AT10A_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Phospholipid-transporting ATPase VA; ATPase class V type 10A; P-locus fat-associated ATPase; P4-ATPase flippase complex alpha subunit ATP10A; | |
Q14B71 (CDCA2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Cell division cycle-associated protein 2; | |
Q3V089 (RBM44_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | RNA-binding protein 44; RNA-binding motif protein 44; | |
Q8R2I6 (DEFB9_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Beta-defensin 9; Defensin, beta 9; | |
Q8R2E6 (V1A11_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Vomeronasal type-1 receptor A11; | |
Q80XA0 (TM121_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Transmembrane protein 121; Protein hole; | |
Q05922 (DUSP2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Dual specificity protein phosphatase 2; Dual specificity protein phosphatase PAC-1; | |
A2ADF7 (S2534_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Solute carrier family 25 member 34; | |
Q9D075 (TM10B_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | tRNA methyltransferase 10 homolog B; RNA (guanine-9-)-methyltransferase domain-containing protein 3; tRNA (guanine(9)-N(1))-methyltransferase TRMT10B; | |
P10085 (MYOD1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Myoblast determination protein 1; | |
Q8VFK2 (O5G25_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Olfactory receptor 5G25; Olfactory receptor 1002; Olfactory receptor 175-2; | |
Q8VIC7 (V1R45_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Vomeronasal type-1 receptor 45; Pheromone receptor 2; Vomeronasal type-1 receptor A2; Vomeronasal type-1 receptor A9; | |
Q9JJZ4 (UB2J1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Ubiquitin-conjugating enzyme E2 J1; E2 ubiquitin-conjugating enzyme J1; Non-canonical ubiquitin-conjugating enzyme 1; | |
Q91XE4 (ACY3_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | N-acyl-aromatic-L-amino acid amidohydrolase (carboxylate-forming); Acylase III; Aminoacylase III; Aminoacylase-3; Aspartoacylase-2; Hepatitis C virus core-binding protein 1; | |
Q7TNC6 (KI26B_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Kinesin-like protein KIF26B; | |
Q9ESD7 (DYSF_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Dysferlin; Dystrophy-associated fer-1-like protein; Fer-1-like protein 1; | |
Q8K284 (TF3C1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | General transcription factor 3C polypeptide 1; TF3C-alpha; TFIIIC box B-binding subunit; Transcription factor IIIC 220 kDa subunit; Transcription factor IIIC subunit alpha; | |
Q7TPD1 (FBX11_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | F-box only protein 11; | |
O54786 (DFFA_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | DNA fragmentation factor subunit alpha; DNA fragmentation factor 45 kDa subunit; Inhibitor of CAD; | |
Q9ERF3 (SKI8_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Superkiller complex protein 8; Meiotic recombination REC14 protein homolog; WD repeat-containing protein 61; Superkiller complex protein 8, N-terminally processed; WD repeat-containing protein 61, N-terminally processed; | |
Q5SWY8 (SC5AA_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Sodium/mannose cotransporter SLC5A10; Sodium/glucose cotransporter 5; Solute carrier family 5 member 10; | |
P83877 (TXN4A_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Thioredoxin-like protein 4A; DIM1 protein homolog; Spliceosomal U5 snRNP-specific 15 kDa protein; Thioredoxin-like U5 snRNP protein U5-15kD; | |
Q9QUL3 (PA2GE_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Group IIE secretory phospholipase A2; Phosphatidylcholine 2-acylhydrolase 2E; | |
Q8CBQ5 (P4K2B_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Phosphatidylinositol 4-kinase type 2-beta; Phosphatidylinositol 4-kinase type II-beta; | |
Q99P27 (PG12B_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Group XIIB secretory phospholipase A2-like protein; Group XIII secretory phospholipase A2-like protein; sPLA2-GXIIB; | |
Q3UUA0 (LHPL7_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | LHFPL tetraspan subfamily member 7 protein; Transmembrane protein 211; | |
Q9CXL3 (CHOLN_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Cholesin; Protein C7orf50 homolog; | |
O35495 (CDK14_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Cyclin-dependent kinase 14; Cell division protein kinase 14; Serine/threonine-protein kinase PFTAIRE-1; | |
P97463 (NRTN_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Neurturin; | |
Q6P3D0 (NUD16_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | U8 snoRNA-decapping enzyme; IDP phosphatase; Inosine diphosphate phosphatase; Nucleoside diphosphate-linked moiety X motif 16; m7GpppN-mRNA hydrolase; | |
Q8BRE0 (RD3_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Protein RD3; Retinal degeneration protein 3; | |
Q60829 (PPR1B_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Protein phosphatase 1 regulatory subunit 1B; DARPP-32; Dopamine- and cAMP-regulated neuronal phosphoprotein; | |
P36363 (FGF7_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Fibroblast growth factor 7; Heparin-binding growth factor 7; Keratinocyte growth factor; | |
Q9QZS2 (RNF4_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | E3 ubiquitin-protein ligase RNF4; RING finger protein 4; | |
Q99MS3 (MP17L_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Mpv17-like protein; | |
Q3U128 (APCD1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Protein APCDD1; Adenomatosis polyposis coli down-regulated 1 protein homolog; | |
Q3UHH2 (S22AN_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Solute carrier family 22 member 23; | |
Q5DU57 (SPT13_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Spermatogenesis-associated protein 13; APC-stimulated guanine nucleotide exchange factor 2; | |
A2A6C4 (SPP2C_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Signal peptide peptidase-like 2C; Intramembrane protease 5; |
The house mouse (Mus musculus) is a small mammal of the order Rodentia, characteristically having a pointed snout, small rounded ears, and a long naked or almost hairless tail. House mice thrive under a variety of conditions; they are found in and around homes and commercial structures, as well as in open fields and agricultural lands where they build underground gangways and nests.
Mus musculus is one of the most important model organisms in biology and medicine. Mice are biologically similar to humans and are thus good models for genetic diseases and research on the immune system.
The complete mouse reference genome was sequenced in 2002.
From left to right: i) The number of proteins in the reference proteome of Mus musculus, ii) the number of unique protein sequences for which at least one model is available, iii) the total number of models and iv) a coverage bar plot is shown.
The bar plot shows the coverage for every protein in the reference proteome of Mus musculus for which there is at least one model. Different colours (dark green to red boxes) represent the coverage of the targets. Targets with high coverage are represented in dark green (more than 80% of the target's length is covered by models), whereas low coverage is shown in red. The size of each box is proportional to the number of target sequences with a given coverage.
For information on the latest proteome for Mus musculus, please visit UniProtKB.
You can easily download the latest protein sequences for Mus musculus proteome here. Please note this download is for the current UniProtKB release, which may be different to release 2025_03 that was used for the most up to date SWISS-MODEL Repository.
Proteins in proteome | Sequences modelled | Models |
21,803 | 19,103 | 43,738 |
Detailed coverage numbers are obtained by hovering the mouse over one of the boxes.
The plot shows the evolution over years (x-axis) of the fraction of Mus musculus reference proteome residues (y-axis) for which structural information is available. Different colors (light blue to dark blue) in the plot represent the quality of the sequence alignment between the reference proteome sequences (targets) and the sequences of the proteins in the structure database (templates). Alignments with low sequence identity are displayed in light blue, whereas alignments with high sequence identity are depicted in dark blue. The SWISS-MODEL Template Library is used as database of templates. Only target-template alignments found by HHblits and only residues with atom coordinates are considered.
This chart shows the percentage of residues in the Mus musculus proteome which are covered by experimental structures and the enhancement of coverage by homology modelling by the SWISS-MODEL pipeline. Experimental residue coverage is determined using SIFTS mapping. For residues which are not covered by experimental structures (including where there are no atom records in SIFTS mapping) the model coverage bars are coloured by QMEANDisCo local quality score.
Many proteins form oligomeric structures either by self-assembly (homo-oligomeric) or by assembly with other proteins (hetero-oligomeric) to accomplish their function. In SWISS-MODEL Repository, the quaternary structure annotation of the template is used to model the target sequence in its oligomeric form. Currently our method is limited to the modelling of homo-oligomeric assemblies. The oligomeric state of the template is only considered if the interface is conserved.
Single Chain | 2-mer | 3-mer | 4-mer | 5-mer | 6-mer | 7-mer | 8-mer | 9-mer | 10-mer | 11-mer | 12-mer | 14-mer | 16-mer | 18-mer | 20-mer | 21-mer | 24-mer | 25-mer | 32-mer | 34-mer | 36-mer | 39-mer | 40-mer | 44-mer | 46-mer | 48-mer | 60-mer | 62-mer |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
38,915 | 3,439 | 298 | 656 | 59 | 144 | 21 | 50 | 2 | 21 | 8 | 47 | 4 | 14 | 3 | 3 | 1 | 18 | 4 | 1 | 1 | 1 | 1 | 7 | 1 | 1 | 4 | 11 | 3 |