UniProtKB AC (Name) | UniProtKB Section | Organism | Description | |
---|---|---|---|---|
P97793 (ALK_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | ALK tyrosine kinase receptor; Anaplastic lymphoma kinase; CD246; | |
Q8CFW7 (C2D2A_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Coiled-coil and C2 domain-containing protein 2A; | |
P70170 (ABCC9_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | ATP-binding cassette sub-family C member 9; Sulfonylurea receptor 2; | |
Q91VN0 (LRP5_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Low-density lipoprotein receptor-related protein 5; Low-density lipoprotein receptor-related protein 7; | |
O35961 (SMR2E_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Submaxillary gland androgen-regulated protein 2, isoform epsilon; Salivary protein MSG2, isoform epsilon; | |
A2A863 (ITB4_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Integrin beta-4; CD104; | |
O08999 (LTBP2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Latent-transforming growth factor beta-binding protein 2; | |
Q8K449 (ABCA9_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | ATP-binding cassette sub-family A member 9; | |
Q6ZQH8 (NU188_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Nucleoporin NUP188; | |
Q5QNQ9 (CORA1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Collagen alpha-1(XXVII) chain; | |
Q3UH06 (RREB1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Ras-responsive element-binding protein 1; RAS-responsive zinc finger transcription factor RREB; | |
Q8K442 (ABC8A_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | ABC-type organic anion transporter ABCA8A; ATP-binding cassette sub-family A member 8A; | |
P48754 (BRCA1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Breast cancer type 1 susceptibility protein homolog; RING-type E3 ubiquitin transferase BRCA1; | |
Q6A070 (TGRM1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | TOG array regulator of axonemal microtubules protein 1; Crescerin-1; Protein FAM179B; | |
Q2EMV9 (PAR14_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Protein mono-ADP-ribosyltransferase PARP14; ADP-ribosyltransferase diphtheria toxin-like 8; Collaborator of STAT6; Poly [ADP-ribose] polymerase 14; | |
Q60575 (KIF1B_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Kinesin-like protein KIF1B; | |
Q9R053 (SCNBA_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Sodium channel protein type 11 subunit alpha; NaN; Sensory neuron sodium channel 2; Sodium channel protein type XI subunit alpha; Voltage-gated sodium channel subunit alpha Nav1.9; | |
P01029 (CO4B_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Complement C4-B; Complement C4 beta chain; Complement C4 alpha chain; C4a anaphylatoxin; Complement C4b-B; Complement C4 gamma chain; | |
Q8BLI0 (ATL1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | ADAMTS-like protein 1; Punctin-1; | |
Q8VIM6 (STRC_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Stereocilin; | |
A2AIV2 (VIR_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Protein virilizer homolog; | |
A2AKG8 (FOCAD_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Focadhesin; | |
Q8BKI2 (TNR6B_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Trinucleotide repeat-containing gene 6B protein; | |
Q8BXR5 (NALCN_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Sodium leak channel NALCN; Sodium leak channel non-selective protein; Voltage gated channel-like protein 1; | |
Q8K448 (ABCA5_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Cholesterol transporter ABCA5; ATP-binding cassette sub-family A member 5; | |
Q3UHH1 (ZSWM8_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Zinc finger SWIM domain-containing protein 8; | |
Q8K389 (CK5P2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | CDK5 regulatory subunit-associated protein 2; CDK5 activator-binding protein C48; | |
Q61037 (TSC2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Tuberin; Tuberous sclerosis 2 protein homolog; | |
O88207 (CO5A1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Collagen alpha-1(V) chain; | |
P20357 (MTAP2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Microtubule-associated protein 2; | |
A0AAQ4VMX2 (CO4A_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Complement C4-A; Sex-limited protein; Complement C4 beta chain; Complement C4-A alpha chain; C4a anaphylatoxin; Complement C4b-A; Complement C4 gamma chain; | |
Q6PFD9 (NUP98_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Nuclear pore complex protein Nup98-Nup96; Nuclear pore complex protein Nup98; 98 kDa nucleoporin; Nucleoporin Nup98; Nup98; Nuclear pore complex protein Nup96; 96 kDa nucleoporin; Nucleoporin Nup96; Nup96; | |
Q9QZQ1 (AFAD_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Afadin; Afadin adherens junction formation factor; Protein Af-6; | |
O70481 (UBR1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | E3 ubiquitin-protein ligase UBR1; N-recognin-1; Ubiquitin-protein ligase E3-alpha-1; Ubiquitin-protein ligase E3-alpha-I; | |
Q6ZPY7 (KDM3B_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Lysine-specific demethylase 3B; JmjC domain-containing histone demethylation protein 2B; Jumonji domain-containing protein 1B; [histone H3]-dimethyl-L-lysine(9) demethylase 3B; | |
Q69Z38 (PEAK1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Inactive tyrosine-protein kinase PEAK1; Pseudopodium-enriched atypical kinase 1; Sugen kinase 269; Tyrosine-protein kinase SgK269; | |
Q8CG19 (LTBP1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Latent-transforming growth factor beta-binding protein 1; Transforming growth factor beta-1-binding protein 1; | |
P97789 (XRN1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | 5'-3' exoribonuclease 1; Protein Dhm2; Strand-exchange protein 1 homolog; | |
Q80TE4 (SI1L2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Signal-induced proliferation-associated 1-like protein 2; | |
O88286 (WIZ_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Protein Wiz; Widely-interspaced zinc finger-containing protein; | |
D3YUB6 (BTBD8_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | BTB/POZ domain-containing protein 8; AP2-interacting clathrin-endocytosis protein; | |
Q9QXL2 (KI21A_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Kinesin-like protein KIF21A; | |
P40201 (CHD1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Chromodomain-helicase-DNA-binding protein 1; ATP-dependent helicase CHD1; | |
Q60592 (MAST2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Microtubule-associated serine/threonine-protein kinase 2; | |
Q62383 (SPT6H_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Transcription elongation factor SPT6; | |
Q9QXL1 (KI21B_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Kinesin-like protein KIF21B; Kinesin-like protein KIF6; | |
Q6QI06 (RICTR_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Rapamycin-insensitive companion of mTOR; AVO3 homolog; Protein pianissimo; | |
Q8K441 (ABCA6_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | ATP-binding cassette sub-family A member 6; | |
Q62230 (SN_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Sialoadhesin; Sheep erythrocyte receptor; Sialic acid-binding Ig-like lectin 1; CD169; | |
E9PZM4 (CHD2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Chromodomain-helicase-DNA-binding protein 2; ATP-dependent helicase CHD2; |
The house mouse (Mus musculus) is a small mammal of the order Rodentia, characteristically having a pointed snout, small rounded ears, and a long naked or almost hairless tail. House mice thrive under a variety of conditions; they are found in and around homes and commercial structures, as well as in open fields and agricultural lands where they build underground gangways and nests.
Mus musculus is one of the most important model organisms in biology and medicine. Mice are biologically similar to humans and are thus good models for genetic diseases and research on the immune system.
The complete mouse reference genome was sequenced in 2002.
From left to right: i) The number of proteins in the reference proteome of Mus musculus, ii) the number of unique protein sequences for which at least one model is available, iii) the total number of models and iv) a coverage bar plot is shown.
The bar plot shows the coverage for every protein in the reference proteome of Mus musculus for which there is at least one model. Different colours (dark green to red boxes) represent the coverage of the targets. Targets with high coverage are represented in dark green (more than 80% of the target's length is covered by models), whereas low coverage is shown in red. The size of each box is proportional to the number of target sequences with a given coverage.
For information on the latest proteome for Mus musculus, please visit UniProtKB.
You can easily download the latest protein sequences for Mus musculus proteome here. Please note this download is for the current UniProtKB release, which may be different to release 2025_03 that was used for the most up to date SWISS-MODEL Repository.
Proteins in proteome | Sequences modelled | Models |
21,803 | 19,103 | 43,738 |
Detailed coverage numbers are obtained by hovering the mouse over one of the boxes.
The plot shows the evolution over years (x-axis) of the fraction of Mus musculus reference proteome residues (y-axis) for which structural information is available. Different colors (light blue to dark blue) in the plot represent the quality of the sequence alignment between the reference proteome sequences (targets) and the sequences of the proteins in the structure database (templates). Alignments with low sequence identity are displayed in light blue, whereas alignments with high sequence identity are depicted in dark blue. The SWISS-MODEL Template Library is used as database of templates. Only target-template alignments found by HHblits and only residues with atom coordinates are considered.
This chart shows the percentage of residues in the Mus musculus proteome which are covered by experimental structures and the enhancement of coverage by homology modelling by the SWISS-MODEL pipeline. Experimental residue coverage is determined using SIFTS mapping. For residues which are not covered by experimental structures (including where there are no atom records in SIFTS mapping) the model coverage bars are coloured by QMEANDisCo local quality score.
Many proteins form oligomeric structures either by self-assembly (homo-oligomeric) or by assembly with other proteins (hetero-oligomeric) to accomplish their function. In SWISS-MODEL Repository, the quaternary structure annotation of the template is used to model the target sequence in its oligomeric form. Currently our method is limited to the modelling of homo-oligomeric assemblies. The oligomeric state of the template is only considered if the interface is conserved.
Single Chain | 2-mer | 3-mer | 4-mer | 5-mer | 6-mer | 7-mer | 8-mer | 9-mer | 10-mer | 11-mer | 12-mer | 14-mer | 16-mer | 18-mer | 20-mer | 21-mer | 24-mer | 25-mer | 32-mer | 34-mer | 36-mer | 39-mer | 40-mer | 44-mer | 46-mer | 48-mer | 60-mer | 62-mer |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
38,915 | 3,439 | 298 | 656 | 59 | 144 | 21 | 50 | 2 | 21 | 8 | 47 | 4 | 14 | 3 | 3 | 1 | 18 | 4 | 1 | 1 | 1 | 1 | 7 | 1 | 1 | 4 | 11 | 3 |