UniProtKB AC (Name) | UniProtKB Section | Organism | Description | |
---|---|---|---|---|
D3Z1D3 (CEFIP_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Cardiac-enriched FHL2-interacting protein; | |
Q8C0D7 (ING4_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Inhibitor of growth protein 4; p29ING4; | |
Q8VEK0 (CC50A_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Cell cycle control protein 50A; P4-ATPase flippase complex beta subunit TMEM30A; Transmembrane protein 30A; | |
Q9QYS1 (WNT16_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Protein Wnt-16; | |
P22727 (WNT6_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Protein Wnt-6; | |
P59268 (ZDHC9_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Palmitoyltransferase ZDHHC9; Zinc finger DHHC domain-containing protein 9; | |
Q8CIQ6 (MTR1B_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Melatonin receptor type 1B; | |
Q8BKT8 (HAUS7_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | HAUS augmin-like complex subunit 7; 26S proteasome-associated UCH37-interacting protein 1; UCHL5-interacting protein; | |
Q9D4J7 (PHF6_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | PHD finger protein 6; | |
P61793 (LPAR1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Lysophosphatidic acid receptor 1; Lysophosphatidic acid receptor Edg-2; Rec1.3; VZG-1; | |
Q91Y97 (ALDOB_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Fructose-bisphosphate aldolase B; Aldolase 2; Liver-type aldolase; | |
Q8CES0 (NAA30_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | N-alpha-acetyltransferase 30; N-acetyltransferase 12; N-acetyltransferase MAK3 homolog; NatC catalytic subunit; | |
P33766 (FPR1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | fMet-Leu-Phe receptor; N-formyl peptide receptor; N-formylpeptide chemoattractant receptor; | |
Q8R0Z5 (MFRN2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Mitoferrin-2; Mitochondrial RNA-splicing protein 3/4 homolog; Mitochondrial iron transporter 2; Solute carrier family 25 member 28; | |
Q8VCX2 (S35C2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Solute carrier family 35 member C2; Ovarian cancer-overexpressed gene 1 protein; | |
Q5SSK3 (TEFM_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Transcription elongation factor, mitochondrial; | |
Q8C5N5 (PDD2L_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Programmed cell death protein 2-like; | |
Q9WUI1 (MK11_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Mitogen-activated protein kinase 11; Mitogen-activated protein kinase p38 beta; | |
P05064 (ALDOA_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Fructose-bisphosphate aldolase A; Aldolase 1; Muscle-type aldolase; | |
Q717B2 (TDPZ2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | TD and POZ domain-containing protein 2; | |
Q3UXZ6 (FA81A_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Protein FAM81A; | |
A7XV14 (SKI11_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Selection and upkeep of intraepithelial T-cells protein 11; | |
Q99J62 (RFC4_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Replication factor C subunit 4; Activator 1 subunit 4; | |
Q8BSD4 (CXD4_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Gap junction delta-4 protein; Connexin-39; | |
O54910 (IKBE_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | NF-kappa-B inhibitor epsilon; I-kappa-B-epsilon; | |
Q8BZT5 (LRC19_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Leucine-rich repeat-containing protein 19; | |
A7TZE6 (SKIT1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Selection and upkeep of intraepithelial T-cells protein 1; Immunoglobulin-like and transmembrane domain-containing protein expressed in skin and thymus protein 1; | |
Q8VHT7 (TF3A_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Transcription factor IIIA; | |
Q9QXB9 (DRG2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Developmentally-regulated GTP-binding protein 2; Translation factor GTPase DRG2; | |
Q9CPS7 (PNO1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | RNA-binding protein PNO1; | |
Q9D3X5 (PACRL_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | PACRG-like protein; | |
P31955 (AREG_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Amphiregulin; Schwannoma-derived growth factor; | |
Q9ESY9 (GILT_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Gamma-interferon-inducible lysosomal thiol reductase; Gamma-interferon-inducible protein IP-30; Lysosomal thiol reductase IP30; | |
Q9D6J6 (NDUV2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial; NADH-ubiquinone oxidoreductase 24 kDa subunit; | |
Q9Z2U0 (PSA7_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Proteasome subunit alpha type-7; Proteasome subunit RC6-1; | |
Q6GQU0 (CC070_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | UPF0524 protein C3orf70 homolog; | |
Q5DT36 (KLRI2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Killer cell lectin-like receptor subfamily I member 2; | |
O35417 (PDYN_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Proenkephalin-B; Beta-neoendorphin-dynorphin; Preprodynorphin; Alpha-neoendorphin; Beta-neoendorphin; Big dynorphin; Big Dyn; Dynorphin A(1-17); Dyn-A17; Dynorphin A; Dynorphin A(1-13); Dynorphin A(1-8); Leu-enkephalin; Rimorphin; Dynorphin B; Dyn-B; Dynorphin B(1-13); Leumorphin; Dynorphin B-29; | |
P08882 (GRAC_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Granzyme C; B10; Cytotoxic cell protease 2; | |
B2KG20 (KLRI1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Killer cell lectin-like receptor subfamily I member 1; | |
Q9WUK2 (IF4H_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Eukaryotic translation initiation factor 4H; Williams-Beuren syndrome chromosomal region 1 protein homolog; | |
Q9CQJ0 (THEM5_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Acyl-coenzyme A thioesterase THEM5; Acyl-coenzyme A thioesterase 15; Thioesterase superfamily member 5; | |
Q7TNB4 (MSTRO_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Protein maestro; Male-specific transcription in the developing reproductive organs; | |
P08883 (GRAF_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Granzyme F; C134; CTL serine protease 3; Cytotoxic cell protease 4; Cytotoxic serine protease 3; MCSP3; | |
Q9CPT3 (NANP_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | N-acylneuraminate-9-phosphatase; Haloacid dehalogenase-like hydrolase domain-containing protein 4; Neu5Ac-9-Pase; | |
P35242 (SFTPA_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Pulmonary surfactant-associated protein A; | |
P08884 (GRAE_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Granzyme E; CTL serine protease 2; Cytotoxic cell protease 3; Cytotoxic serine protease 2; D12; MCSP2; | |
P13366 (GRAG_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Granzyme G; CTL serine protease 1; MCSP-1; | |
Q8BLU2 (MT21C_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Protein-lysine methyltransferase METTL21C; Methyltransferase-like protein 21C; | |
O70456 (1433S_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | 14-3-3 protein sigma; Stratifin; |
The house mouse (Mus musculus) is a small mammal of the order Rodentia, characteristically having a pointed snout, small rounded ears, and a long naked or almost hairless tail. House mice thrive under a variety of conditions; they are found in and around homes and commercial structures, as well as in open fields and agricultural lands where they build underground gangways and nests.
Mus musculus is one of the most important model organisms in biology and medicine. Mice are biologically similar to humans and are thus good models for genetic diseases and research on the immune system.
The complete mouse reference genome was sequenced in 2002.
From left to right: i) The number of proteins in the reference proteome of Mus musculus, ii) the number of unique protein sequences for which at least one model is available, iii) the total number of models and iv) a coverage bar plot is shown.
The bar plot shows the coverage for every protein in the reference proteome of Mus musculus for which there is at least one model. Different colours (dark green to red boxes) represent the coverage of the targets. Targets with high coverage are represented in dark green (more than 80% of the target's length is covered by models), whereas low coverage is shown in red. The size of each box is proportional to the number of target sequences with a given coverage.
For information on the latest proteome for Mus musculus, please visit UniProtKB.
You can easily download the latest protein sequences for Mus musculus proteome here. Please note this download is for the current UniProtKB release, which may be different to release 2024_03 that was used for the most up to date SWISS-MODEL Repository.
Proteins in proteome | Sequences modelled | Models |
21,717 | 18,849 | 43,604 |
Detailed coverage numbers are obtained by hovering the mouse over one of the boxes.
The plot shows the evolution over years (x-axis) of the fraction of Mus musculus reference proteome residues (y-axis) for which structural information is available. Different colors (light blue to dark blue) in the plot represent the quality of the sequence alignment between the reference proteome sequences (targets) and the sequences of the proteins in the structure database (templates). Alignments with low sequence identity are displayed in light blue, whereas alignments with high sequence identity are depicted in dark blue. The SWISS-MODEL Template Library is used as database of templates. Only target-template alignments found by HHblits and only residues with atom coordinates are considered.
This chart shows the percentage of residues in the Mus musculus proteome which are covered by experimental structures and the enhancement of coverage by homology modelling by the SWISS-MODEL pipeline. Experimental residue coverage is determined using SIFTS mapping. For residues which are not covered by experimental structures (including where there are no atom records in SIFTS mapping) the model coverage bars are coloured by QMEANDisCo local quality score.
Many proteins form oligomeric structures either by self-assembly (homo-oligomeric) or by assembly with other proteins (hetero-oligomeric) to accomplish their function. In SWISS-MODEL Repository, the quaternary structure annotation of the template is used to model the target sequence in its oligomeric form. Currently our method is limited to the modelling of homo-oligomeric assemblies. The oligomeric state of the template is only considered if the interface is conserved.
Single Chain | 2-mer | 3-mer | 4-mer | 5-mer | 6-mer | 7-mer | 8-mer | 9-mer | 10-mer | 11-mer | 12-mer | 14-mer | 16-mer | 18-mer | 20-mer | 21-mer | 24-mer | 25-mer | 26-mer | 32-mer | 34-mer | 36-mer | 39-mer | 40-mer | 46-mer | 48-mer | 55-mer | 56-mer | 60-mer | 62-mer |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
38,904 | 3,365 | 288 | 627 | 54 | 128 | 18 | 49 | 3 | 26 | 10 | 41 | 3 | 24 | 1 | 2 | 1 | 22 | 4 | 2 | 1 | 1 | 1 | 2 | 6 | 1 | 5 | 1 | 3 | 8 | 3 |