Filter results by: Taxon Proteome
1 - 50 of 85857 UniProtKB matches
(95568 models, 38982 structures.)
UniProtKB AC
(Name)
UniProtKB Section
 
Homology Model
 
Experimental Structure
OrganismDescription
Q80XL7
(MPPE1_MOUSE)
Swiss-ProtMus musculus
(Mouse)
Metallophosphoesterase 1;
Post-GPI attachment to proteins factor 5;
Q61216
(MRE11_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Double-strand break repair protein MRE11;
Meiotic recombination 11 homolog 1;
Meiotic recombination 11 homolog A;
Q02395
(MTF2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Metal-response element-binding transcription factor 2;
Metal regulatory transcription factor 2;
Metal-response element DNA-binding protein M96;
Polycomb-like protein 2;
Zinc-regulated factor 1;
Q9QYI5
(DNJB2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
DnaJ homolog subfamily B member 2;
DnaJ homolog subfamily B member 10;
mDj8;
Q2MHE5
(DOK6_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Docking protein 6;
Downstream of tyrosine kinase 6;
Q9CZR8
(EFTS_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Elongation factor Ts, mitochondrial;
Q9JHC9
(ELF2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
ETS-related transcription factor Elf-2;
E74-like factor 2;
New ETS-related factor;
Q9WUZ9
(ENTP5_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Ectonucleoside triphosphate diphosphohydrolase 5;
CD39 antigen-like 4;
ER-UDPase;
Guanosine-diphosphatase ENTPD5;
Nucleoside diphosphatase;
Uridine-diphosphatase ENTPD5;
P54763
(EPHB2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Ephrin type-B receptor 2;
Neural kinase;
Nuk receptor tyrosine kinase;
Tyrosine-protein kinase receptor EPH-3;
Tyrosine-protein kinase receptor SEK-3;
EphB2/CTF1;
EphB2/CTF2;
P97767
(EYA1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Protein phosphatase EYA1;
Eyes absent homolog 1;
Q8BYI8
(F234B_MOUSE)
Swiss-ProtMus musculus
(Mouse)
Protein FAM234B;
B2RRE7
(OTUD4_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
OTU domain-containing protein 4;
Q8CFF0
(PAR11_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Protein mono-ADP-ribosyltransferase PARP11;
ADP-ribosyltransferase diphtheria toxin-like 11;
Poly [ADP-ribose] polymerase 11;
Q9Z2J6
(PD2R2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Prostaglandin D2 receptor 2;
Chemoattractant receptor-homologous molecule expressed on Th2 cells;
G-protein coupled receptor 44;
CD294;
Q64338
(PDE1C_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C;
Q9JK42
(PDK2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
[Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, mitochondrial;
Pyruvate dehydrogenase kinase isoform 2;
Q62053
(PE2R2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Prostaglandin E2 receptor EP2 subtype;
Prostanoid EP2 receptor;
Q91ZF2
(CAT7_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Cathepsin 7;
Cathepsin 1;
Q8VBX4
(CLC4K_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
C-type lectin domain family 4 member K;
Langerin;
CD207;
Q8K158
(CNPD1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Protein CNPPD1;
Q8VC74
(COX18_MOUSE)
Swiss-ProtMus musculus
(Mouse)
Cytochrome c oxidase assembly protein COX18, mitochondrial;
P28776
(I23O1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Indoleamine 2,3-dioxygenase 1;
Indoleamine-pyrrole 2,3-dioxygenase;
P26952
(IL3RA_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Interleukin-3 receptor subunit alpha;
Interleukin-3 receptor class II alpha chain;
CD123;
P49442
(INPP_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Inositol polyphosphate 1-phosphatase;
Q5DTY9
(KCD16_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
BTB/POZ domain-containing protein KCTD16;
Q8K1Z6
(GPR18_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
N-arachidonyl glycine receptor;
G-protein coupled receptor 18;
Q8R1W2
(GSG1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Germ cell-specific gene 1 protein;
Germ cell-associated protein 1;
Q8K2C9
(HACD3_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3;
3-hydroxyacyl-CoA dehydratase 3;
Butyrate-induced protein 1;
Protein-tyrosine phosphatase-like A domain-containing protein 1;
O70577
(S22A2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Solute carrier family 22 member 2;
Organic cation transporter 2;
Q9QZ03
(S39A1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Zinc transporter ZIP1;
Solute carrier family 39 member 1;
Zinc-iron-regulated transporter-like;
Zrt- and Irt-like protein 1;
Q9CY58
(SERB1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
SERPINE1 mRNA-binding protein 1;
PAI1 RNA-binding protein 1;
Plasminogen activator inhibitor 1 RNA-binding protein;
Q61711
(SIAL_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Integrin-binding sialoprotein;
Bone sialoprotein 2;
Bone sialoprotein II;
Cell-binding sialoprotein;
Q9D2C9
(SNPC3_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
snRNA-activating protein complex subunit 3;
Small nuclear RNA-activating complex polypeptide 3;
E9PWZ3
(RL3L_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Large ribosomal subunit protein uL3-like;
60S ribosomal protein L3-like;
Q3UHJ8
(RNF44_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
RING finger protein 44;
Q9Z139
(ROR1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Inactive tyrosine-protein kinase transmembrane receptor ROR1;
Neurotrophic tyrosine kinase, receptor-related 1;
Q9R0X5
(RPGR_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
X-linked retinitis pigmentosa GTPase regulator;
Q9D020
(5NT3A_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Cytosolic 5'-nucleotidase 3A;
7-methylguanosine phosphate-specific 5'-nucleotidase;
Cytosolic 5'-nucleotidase 3;
Cytosolic 5'-nucleotidase III;
Lupin;
Pyrimidine 5'-nucleotidase 1;
Q8BM81
(AD4F1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Arylacetamide deacetylase-like 4 family member 1;
AADACL4 family member 1;
Q9JKV1
(ADRM1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Proteasomal ubiquitin receptor ADRM1;
110 kDa cell membrane glycoprotein;
Adhesion-regulating molecule 1;
Rpn13 homolog;
Q8BGT5
(ALAT2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Alanine aminotransferase 2;
Glutamate pyruvate transaminase 2;
Glutamic--alanine transaminase 2;
Glutamic--pyruvic transaminase 2;
O55189
(AMBN_MOUSE)
Swiss-ProtMus musculus
(Mouse)
Ameloblastin;
Q569N2
(ANR37_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Ankyrin repeat domain-containing protein 37;
Q8BZ64
(TECT1_MOUSE)
Swiss-ProtMus musculus
(Mouse)
Tectonic-1;
Q8VCZ3
(THAP7_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
THAP domain-containing protein 7;
Q80Z37
(TOPRS_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
E3 ubiquitin-protein ligase Topors;
RING-type E3 ubiquitin transferase Topors;
SUMO1-protein E3 ligase Topors;
Topoisomerase I-binding RING finger protein;
Topoisomerase I-binding arginine/serine-rich protein;
Tumor suppressor p53-binding protein 3;
Q7M722
(TR114_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Taste receptor type 2 member 114;
Q8CBC7
(TRM7_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase;
2'-O-ribose RNA methyltransferase TRM7 homolog;
Protein ftsJ homolog 1;
Q91WG3
(TRUB2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Pseudouridylate synthase TRUB2, mitochondrial;
TruB pseudouridine synthase homolog 2;
tRNA pseudouridine 55 synthase TRUB2;
P18653
(KS6A1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Ribosomal protein S6 kinase alpha-1;
90 kDa ribosomal protein S6 kinase 1;
MAP kinase-activated protein kinase 1a;
Ribosomal S6 kinase 1;
1 - 50 of 85857
Mus musculus (Mouse)

The house mouse (Mus musculus) is a small mammal of the order Rodentia, characteristically having a pointed snout, small rounded ears, and a long naked or almost hairless tail. House mice thrive under a variety of conditions; they are found in and around homes and commercial structures, as well as in open fields and agricultural lands where they build underground gangways and nests.

Mus musculus is one of the most important model organisms in biology and medicine. Mice are biologically similar to humans and are thus good models for genetic diseases and research on the immune system.

The complete mouse reference genome was sequenced in 2002.

"Mus musculus", Wikipedia: The Free Encyclopedia

Protein models in Repository

From left to right: i) The number of proteins in the reference proteome of Mus musculus, ii) the number of unique protein sequences for which at least one model is available, iii) the total number of models and iv) a coverage bar plot is shown.
The bar plot shows the coverage for every protein in the reference proteome of Mus musculus for which there is at least one model. Different colours (dark green to red boxes) represent the coverage of the targets. Targets with high coverage are represented in dark green (more than 80% of the target's length is covered by models), whereas low coverage is shown in red. The size of each box is proportional to the number of target sequences with a given coverage.

For information on the latest proteome for Mus musculus, please visit UniProtKB.

You can easily download the latest protein sequences for Mus musculus proteome here. Please note this download is for the current UniProtKB release, which may be different to release 2025_02 that was used for the most up to date SWISS-MODEL Repository.

Proteins in proteomeSequences modelledModels
21,75619,07144,770

Detailed coverage numbers are obtained by hovering the mouse over one of the boxes.

Structural Coverage

The plot shows the evolution over years (x-axis) of the fraction of Mus musculus reference proteome residues (y-axis) for which structural information is available. Different colors (light blue to dark blue) in the plot represent the quality of the sequence alignment between the reference proteome sequences (targets) and the sequences of the proteins in the structure database (templates). Alignments with low sequence identity are displayed in light blue, whereas alignments with high sequence identity are depicted in dark blue. The SWISS-MODEL Template Library is used as database of templates. Only target-template alignments found by HHblits and only residues with atom coordinates are considered.

Residue Coverage

This chart shows the percentage of residues in the Mus musculus proteome which are covered by experimental structures and the enhancement of coverage by homology modelling by the SWISS-MODEL pipeline. Experimental residue coverage is determined using SIFTS mapping. For residues which are not covered by experimental structures (including where there are no atom records in SIFTS mapping) the model coverage bars are coloured by QMEANDisCo local quality score.

Oligomeric State

Many proteins form oligomeric structures either by self-assembly (homo-oligomeric) or by assembly with other proteins (hetero-oligomeric) to accomplish their function. In SWISS-MODEL Repository, the quaternary structure annotation of the template is used to model the target sequence in its oligomeric form. Currently our method is limited to the modelling of homo-oligomeric assemblies. The oligomeric state of the template is only considered if the interface is conserved.

Single Chain2-mer3-mer4-mer5-mer6-mer7-mer8-mer9-mer10-mer11-mer12-mer14-mer16-mer18-mer20-mer21-mer24-mer25-mer32-mer34-mer36-mer39-mer40-mer44-mer46-mer48-mer60-mer62-mer
39,8113,540300672641422251222105251623118421117114123
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