Filter results by: Taxon Proteome
1 - 50 of 85916 UniProtKB matches
(96051 models, 40319 structures.)
UniProtKB AC
(Name)
UniProtKB Section
 
Homology Model
 
Experimental Structure
OrganismDescription
Q9JJ06
(C1GLT_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1;
Core 1 O-glycan T-synthase;
Core 1 UDP-galactose:N-acetylgalactosamine-alpha-R beta 1,3-galactosyltransferase 1;
Core 1 beta1,3-galactosyltransferase 1;
Q8BLX4
(FUCT1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
GDP-fucose transporter 1;
Solute carrier family 35 member C1;
Q91WT9
(CBS_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Cystathionine beta-synthase;
Beta-thionase;
Serine sulfhydrase;
A2ALI5
(AJAP1_MOUSE)
Swiss-ProtMus musculus
(Mouse)
Adherens junction-associated protein 1;
Q8BYW1
(RHG25_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Rho GTPase-activating protein 25;
Rho-type GTPase-activating protein 25;
P62862
(RS30_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein;
FAU ubiquitin-like and ribosomal protein S30;
Ubiquitin-like protein FUBI;
Small ribosomal subunit protein eS30;
40S ribosomal protein S30;
P97304
(RPAC2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
DNA-directed RNA polymerases I and III subunit RPAC2;
AC19;
DNA-directed RNA polymerase I subunit D;
RNA polymerase I 16 kDa subunit;
Q3UW26
(BSPH1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Binder of sperm protein homolog 1;
Bovine seminal plasma protein homolog 1;
Bovine seminal plasma protein-like 1;
Q5SUE7
(ADAD1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Adenosine deaminase domain-containing protein 1;
Testis nuclear RNA-binding protein;
Q2XU92
(ACBG2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Long-chain-fatty-acid--CoA ligase ACSBG2;
Acyl-CoA synthetase bubblegum family member 2;
Arachidonate--CoA ligase ACSBG2;
Bubblegum-related protein;
Q8CHY3
(DYM_MOUSE)
Swiss-ProtMus musculus
(Mouse)
Dymeclin;
Q9Z2C4
(MTMR1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Phosphatidylinositol-3-phosphate phosphatase MTMR1;
Myotubularin-related protein 1;
Phosphatidylinositol-3,5-bisphosphate 3-phosphatase;
Phosphatidylinositol-3-phosphate phosphatase;
Q7TN79
(AKA7G_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
A-kinase anchor protein 7 isoform gamma;
A-kinase anchor protein 18;
Protein kinase A-anchoring protein 7 isoform gamma;
Q9R123
(NAA80_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
N-alpha-acetyltransferase 80;
N-acetyltransferase 6;
Protein fusion-2 homolog;
Q91VD1
(LEG12_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Galectin-12;
Q99L85
(ELP5_MOUSE)
Swiss-ProtMus musculus
(Mouse)
Elongator complex protein 5;
Dermal papilla-derived protein 6 homolog;
Retinoic acid-induced protein 12;
Q9CQY5
(MAGT1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit MAGT1;
Implantation-associated protein;
Magnesium transporter protein 1;
Q3UZW7
(EF2KT_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Protein-lysine N-methyltransferase EEF2KMT;
eEF2-lysine methyltransferase;
Q8C0L0
(TMX4_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Thioredoxin-related transmembrane protein 4;
Thioredoxin domain-containing protein 13;
Q99JZ0
(SDCB2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Syntenin-2;
Syndecan-binding protein 2;
Q91V79
(FITM1_MOUSE)
Swiss-ProtMus musculus
(Mouse)
Fat storage-inducing transmembrane protein 1;
Fat-inducing protein 1;
Q8CD60
(INSY1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Inhibitory synaptic factor 1;
Q9JLJ4
(ELOV2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Very long chain fatty acid elongase 2;
3-keto acyl-CoA synthase Elovl2;
ELOVL fatty acid elongase 2;
Elongation of very long chain fatty acids protein 2;
Very long chain 3-ketoacyl-CoA synthase 2;
Very long chain 3-oxoacyl-CoA synthase 2;
Q9DAV9
(TM38B_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Trimeric intracellular cation channel type B;
Mitsugumin-33B;
Transmembrane protein 38B;
Q9D4F2
(PLPP6_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Polyisoprenoid diphosphate/phosphate phosphohydrolase PLPP6;
Phospholipid phosphatase 6;
Q9WTP9
(VAX2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Ventral anterior homeobox 2;
Ventral retina homeodomain protein;
Q9D338
(RM19_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Large ribosomal subunit protein bL19m;
39S ribosomal protein L19, mitochondrial;
Q6GQV7
(EDRF1_MOUSE)
Swiss-ProtMus musculus
(Mouse)
Erythroid differentiation-related factor 1;
Q689Z5
(SBNO1_MOUSE)
Swiss-ProtMus musculus
(Mouse)
Protein strawberry notch homolog 1;
O88667
(RAD_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
GTP-binding protein RAD;
Q8VBV9
(O51E2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Olfactory receptor 51E2;
Olfactory receptor 78;
Q9D738
(ASB12_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Ankyrin repeat and SOCS box protein 12;
Q8BGW8
(VGLL2_MOUSE)
Swiss-ProtMus musculus
(Mouse)
Transcription cofactor vestigial-like protein 2;
Protein VITO1;
Q60884
(O8G17_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Olfactory receptor 8G17;
Odorant receptor M15;
Olfactory receptor 146;
Olfactory receptor 171-10;
Olfactory receptor 7D;
Q9JJ80
(RPF2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Ribosome production factor 2 homolog;
Brix domain-containing protein 1;
Ribosome biogenesis protein RPF2 homolog;
Q5SQP1
(HORM2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
HORMA domain-containing protein 2;
Q9D4V4
(TAF1D_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
TATA box-binding protein-associated factor RNA polymerase I subunit D;
TATA box-binding protein-associated factor 1D;
Transcription initiation factor SL1/TIF-IB subunit D;
Q91ZB9
(MRGB5_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Mas-related G-protein coupled receptor member B5;
Q99NA2
(ATOH8_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Transcription factor Atoh8;
Helix-loop-helix protein mATH-6;
Okadin;
Protein atonal homolog 8;
Q4KL18
(TM171_MOUSE)
Swiss-ProtMus musculus
(Mouse)
Transmembrane protein 171;
Q7TPE5
(S7A6O_MOUSE)
Swiss-ProtMus musculus
(Mouse)
Probable RNA polymerase II nuclear localization protein SLC7A6OS;
Solute carrier family 7 member 6 opposite strand transcript homolog;
P41155
(TNFC_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Lymphotoxin-beta;
Tumor necrosis factor C;
Tumor necrosis factor ligand superfamily member 3;
Q8R1J9
(TOR2A_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Torsin-2A;
Torsin family 2 member A;
P97931
(UNG_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Uracil-DNA glycosylase;
Q8VCZ8
(RUSD1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
RNA pseudouridylate synthase domain-containing protein 1;
Ribosomal large subunit pseudouridine synthase C-like protein;
Q925N2
(SFXN2_MOUSE)
Swiss-ProtMus musculus
(Mouse)
Sideroflexin-2;
Q9WUU7
(CATZ_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Cathepsin Z;
Q9D0Q7
(RM45_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Large ribosomal subunit protein mL45;
39S ribosomal protein L45, mitochondrial;
Q9D6D0
(UCP4_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Mitochondrial uncoupling protein 4;
Solute carrier family 25, member 27;
A2RSX4
(STPG3_MOUSE)
Swiss-ProtMus musculus
(Mouse)
Protein STPG3;
Sperm-tail PG-rich repeat-containing protein 3;
1 - 50 of 85916
Mus musculus (Mouse)

The house mouse (Mus musculus) is a small mammal of the order Rodentia, characteristically having a pointed snout, small rounded ears, and a long naked or almost hairless tail. House mice thrive under a variety of conditions; they are found in and around homes and commercial structures, as well as in open fields and agricultural lands where they build underground gangways and nests.

Mus musculus is one of the most important model organisms in biology and medicine. Mice are biologically similar to humans and are thus good models for genetic diseases and research on the immune system.

The complete mouse reference genome was sequenced in 2002.

"Mus musculus", Wikipedia: The Free Encyclopedia

Protein models in Repository

From left to right: i) The number of proteins in the reference proteome of Mus musculus, ii) the number of unique protein sequences for which at least one model is available, iii) the total number of models and iv) a coverage bar plot is shown.
The bar plot shows the coverage for every protein in the reference proteome of Mus musculus for which there is at least one model. Different colours (dark green to red boxes) represent the coverage of the targets. Targets with high coverage are represented in dark green (more than 80% of the target's length is covered by models), whereas low coverage is shown in red. The size of each box is proportional to the number of target sequences with a given coverage.

For information on the latest proteome for Mus musculus, please visit UniProtKB.

You can easily download the latest protein sequences for Mus musculus proteome here. Please note this download is for the current UniProtKB release, which may be different to release 2025_03 that was used for the most up to date SWISS-MODEL Repository.

Proteins in proteomeSequences modelledModels
21,80319,10343,738

Detailed coverage numbers are obtained by hovering the mouse over one of the boxes.

Structural Coverage

The plot shows the evolution over years (x-axis) of the fraction of Mus musculus reference proteome residues (y-axis) for which structural information is available. Different colors (light blue to dark blue) in the plot represent the quality of the sequence alignment between the reference proteome sequences (targets) and the sequences of the proteins in the structure database (templates). Alignments with low sequence identity are displayed in light blue, whereas alignments with high sequence identity are depicted in dark blue. The SWISS-MODEL Template Library is used as database of templates. Only target-template alignments found by HHblits and only residues with atom coordinates are considered.

Residue Coverage

This chart shows the percentage of residues in the Mus musculus proteome which are covered by experimental structures and the enhancement of coverage by homology modelling by the SWISS-MODEL pipeline. Experimental residue coverage is determined using SIFTS mapping. For residues which are not covered by experimental structures (including where there are no atom records in SIFTS mapping) the model coverage bars are coloured by QMEANDisCo local quality score.

Oligomeric State

Many proteins form oligomeric structures either by self-assembly (homo-oligomeric) or by assembly with other proteins (hetero-oligomeric) to accomplish their function. In SWISS-MODEL Repository, the quaternary structure annotation of the template is used to model the target sequence in its oligomeric form. Currently our method is limited to the modelling of homo-oligomeric assemblies. The oligomeric state of the template is only considered if the interface is conserved.

Single Chain2-mer3-mer4-mer5-mer6-mer7-mer8-mer9-mer10-mer11-mer12-mer14-mer16-mer18-mer20-mer21-mer24-mer25-mer32-mer34-mer36-mer39-mer40-mer44-mer46-mer48-mer60-mer62-mer
38,9153,43929865659144215022184741433118411117114113
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