Filter results by: Taxon Proteome
1 - 50 of 86046 UniProtKB matches
(94948 models, 33806 structures.)
UniProtKB AC
(Name)
UniProtKB Section
 
Homology Model
 
Experimental Structure
OrganismDescription
Q9WV08
(APJ_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Apelin receptor;
Angiotensin receptor-like 1;
G-protein coupled receptor APJ;
MSR;
D3Z1D3
(CEFIP_MOUSE)
Swiss-ProtMus musculus
(Mouse)
Cardiac-enriched FHL2-interacting protein;
P04370
(MBP_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Myelin basic protein;
Myelin A1 protein;
Q2EG98
(PK1L3_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Polycystin-1-like protein 3;
PC1-like 3 protein;
Polycystic kidney disease protein 1-like 3;
Q9JHD2
(KAT2A_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Histone acetyltransferase KAT2A;
General control of amino acid synthesis protein 5-like 2;
Histone acetyltransferase GCN5;
Histone glutaryltransferase KAT2A;
Histone succinyltransferase KAT2A;
Lysine acetyltransferase 2A;
F7BJB9
(MORC3_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
MORC family CW-type zinc finger protein 3;
Nuclear matrix protein 2;
Zinc finger CW-type coiled-coil domain protein 3;
Q9DC23
(DJC10_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
DnaJ homolog subfamily C member 10;
Endoplasmic reticulum DNA J domain-containing protein 5;
Endoplasmic reticulum DnaJ-PDI fusion protein 1;
J domain-containing protein disulfide isomerase-like protein;
P98078
(DAB2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Disabled homolog 2;
Adaptor molecule disabled-2;
Differentially expressed in ovarian carcinoma 2;
Mitogen-responsive phosphoprotein;
O70348
(DXO_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Decapping and exoribonuclease protein;
5'-3' exoribonuclease DXO;
Dom-3 homolog Z;
NAD-capped RNA hydrolase DXO;
Q8C147
(DOCK8_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Dedicator of cytokinesis protein 8;
P03911
(NU4M_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
NADH-ubiquinone oxidoreductase chain 4;
NADH dehydrogenase subunit 4;
O08712
(TR11B_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Tumor necrosis factor receptor superfamily member 11B;
Osteoclastogenesis inhibitory factor;
Osteoprotegerin;
Q9QYG0
(NDRG2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Protein NDRG2;
N-myc downstream-regulated gene 2 protein;
Protein Ndr2;
Q93092
(TALDO_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Transaldolase;
Q9ES00
(UBE4B_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Ubiquitin conjugation factor E4 B;
RING-type E3 ubiquitin transferase E4 B;
Ubiquitin fusion degradation protein 2;
P30561
(AHR_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Aryl hydrocarbon receptor;
O35253
(SMAD7_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Mothers against decapentaplegic homolog 7;
Mothers against decapentaplegic homolog 8;
SMAD family member 7;
P35278
(RAB5C_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Ras-related protein Rab-5C;
P70158
(ASM3A_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Cyclic GMP-AMP phosphodiesterase SMPDL3A;
Acid sphingomyelinase-like phosphodiesterase 3a;
Q9CQS2
(NOP10_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
H/ACA ribonucleoprotein complex subunit 3;
Nucleolar protein 10;
Nucleolar protein family A member 3;
snoRNP protein NOP10;
Q9Z1W5
(SERP1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Stress-associated endoplasmic reticulum protein 1;
Ribosome-attached membrane protein 4;
Q8R0F8
(FAHD1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Acylpyruvase FAHD1, mitochondrial;
Fumarylacetoacetate hydrolase domain-containing protein 1;
Oxaloacetate decarboxylase;
Q8R4P5
(TMC1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Transmembrane channel-like protein 1;
Beethoven protein;
Deafness protein;
Transmembrane cochlear-expressed protein 1;
P42867
(GPT_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase;
GlcNAc-1-P transferase;
N-acetylglucosamine-1-phosphate transferase;
P70195
(PSB7_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Proteasome subunit beta type-7;
Macropain chain Z;
Multicatalytic endopeptidase complex chain Z;
Proteasome subunit Z;
Q9EPV8
(UBL5_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Ubiquitin-like protein 5;
P47911
(RL6_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Large ribosomal subunit protein eL6;
60S ribosomal protein L6;
TAX-responsive enhancer element-binding protein 107;
Q8BGS2
(BOLA2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
BolA-like protein 2;
Q2TV84
(TRPM1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Transient receptor potential cation channel subfamily M member 1;
Long transient receptor potential channel 1;
Melastatin-1;
Q9QY24
(ZBP1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Z-DNA-binding protein 1;
DNA-dependent activator of IFN-regulatory factors;
Tumor stroma and activated macrophage protein DLM-1;
P01731
(CD8A_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
T-cell surface glycoprotein CD8 alpha chain;
T-cell surface glycoprotein Lyt-2;
CD8a;
P05977
(MYL1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Myosin light chain 1/3, skeletal muscle isoform;
Myosin light chain alkali 1/2;
P62754
(RS6_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Small ribosomal subunit protein eS6;
40S ribosomal protein S6;
Phosphoprotein NP33;
Q91WA6
(SHRPN_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Sharpin;
Shank-associated RH domain-interacting protein;
Shank-interacting protein-like 1;
P11590
(MUP4_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Major urinary protein 4;
Q3UR85
(MYRF_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Myelin regulatory factor;
Myelin gene regulatory factor;
Myelin regulatory factor, N-terminal;
Myelin regulatory factor, C-terminal;
Q80U87
(UBP8_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Ubiquitin carboxyl-terminal hydrolase 8;
Deubiquitinating enzyme 8;
Ubiquitin isopeptidase Y;
Ubiquitin thioesterase 8;
Ubiquitin-specific-processing protease 8;
Q9EPW9
(TLR6_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Toll-like receptor 6;
CD286;
Q61768
(KINH_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Kinesin-1 heavy chain;
Conventional kinesin heavy chain;
Ubiquitous kinesin heavy chain;
P27870
(VAV_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Proto-oncogene vav;
p95vav;
Q8BTI9
(PK3CB_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform;
Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit beta;
Serine/threonine protein kinase PIK3CB;
Q9CUU3
(SYCP2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Synaptonemal complex protein 2;
Synaptonemal complex lateral element protein;
Q80WW9
(DDRGK_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
DDRGK domain-containing protein 1;
UFM1-binding and PCI domain-containing protein 1;
P42230
(STA5A_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Signal transducer and activator of transcription 5A;
Mammary gland factor;
O55013
(TPPC3_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Trafficking protein particle complex subunit 3;
BET3 homolog;
Q99JF5
(MVD1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Diphosphomevalonate decarboxylase;
Mevalonate (diphospho)decarboxylase;
Mevalonate pyrophosphate decarboxylase;
O35206
(COFA1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Collagen alpha-1(XV) chain;
Restin;
Endostatin-XV;
Q9EQU3
(TLR9_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Toll-like receptor 9;
CD289;
Q8K3F7
(TDH_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
L-threonine 3-dehydrogenase, mitochondrial;
O35930
(GP1BA_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Platelet glycoprotein Ib alpha chain;
CD42b;
Glycocalicin;
1 - 50 of 86046
Mus musculus (Mouse)

The house mouse (Mus musculus) is a small mammal of the order Rodentia, characteristically having a pointed snout, small rounded ears, and a long naked or almost hairless tail. House mice thrive under a variety of conditions; they are found in and around homes and commercial structures, as well as in open fields and agricultural lands where they build underground gangways and nests.

Mus musculus is one of the most important model organisms in biology and medicine. Mice are biologically similar to humans and are thus good models for genetic diseases and research on the immune system.

The complete mouse reference genome was sequenced in 2002.

"Mus musculus", Wikipedia: The Free Encyclopedia

Protein models in Repository

From left to right: i) The number of proteins in the reference proteome of Mus musculus, ii) the number of unique protein sequences for which at least one model is available, iii) the total number of models and iv) a coverage bar plot is shown.
The bar plot shows the coverage for every protein in the reference proteome of Mus musculus for which there is at least one model. Different colours (dark green to red boxes) represent the coverage of the targets. Targets with high coverage are represented in dark green (more than 80% of the target's length is covered by models), whereas low coverage is shown in red. The size of each box is proportional to the number of target sequences with a given coverage.

For information on the latest proteome for Mus musculus, please visit UniProtKB.

You can easily download the latest protein sequences for Mus musculus proteome here. Please note this download is for the current UniProtKB release, which may be different to release 2024_02 that was used for the most up to date SWISS-MODEL Repository.

Proteins in proteomeSequences modelledModels
21,70918,79143,366

Detailed coverage numbers are obtained by hovering the mouse over one of the boxes.

Structural Coverage

The plot shows the evolution over years (x-axis) of the fraction of Mus musculus reference proteome residues (y-axis) for which structural information is available. Different colors (light blue to dark blue) in the plot represent the quality of the sequence alignment between the reference proteome sequences (targets) and the sequences of the proteins in the structure database (templates). Alignments with low sequence identity are displayed in light blue, whereas alignments with high sequence identity are depicted in dark blue. The SWISS-MODEL Template Library is used as database of templates. Only target-template alignments found by HHblits and only residues with atom coordinates are considered.

Residue Coverage

This chart shows the percentage of residues in the Mus musculus proteome which are covered by experimental structures and the enhancement of coverage by homology modelling by the SWISS-MODEL pipeline. Experimental residue coverage is determined using SIFTS mapping. For residues which are not covered by experimental structures (including where there are no atom records in SIFTS mapping) the model coverage bars are coloured by QMEANDisCo local quality score.

Oligomeric State

Many proteins form oligomeric structures either by self-assembly (homo-oligomeric) or by assembly with other proteins (hetero-oligomeric) to accomplish their function. In SWISS-MODEL Repository, the quaternary structure annotation of the template is used to model the target sequence in its oligomeric form. Currently our method is limited to the modelling of homo-oligomeric assemblies. The oligomeric state of the template is only considered if the interface is conserved.

Single Chain2-mer3-mer4-mer5-mer6-mer7-mer8-mer9-mer10-mer11-mer12-mer14-mer16-mer18-mer20-mer21-mer24-mer25-mer26-mer32-mer34-mer36-mer39-mer40-mer46-mer48-mer55-mer56-mer60-mer62-mer
38,6323,4032886406312519374241136322121224111216251522
Download