Filter results by: Taxon Proteome
1 - 50 of 85916 UniProtKB matches
(95449 models, 39407 structures.)
UniProtKB AC
(Name)
UniProtKB Section
 
Homology Model
 
Experimental Structure
OrganismDescription
Q91ZX7
(LRP1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Prolow-density lipoprotein receptor-related protein 1;
Alpha-2-macroglobulin receptor;
CD91;
Low-density lipoprotein receptor-related protein 1 85 kDa subunit;
LRP-85;
Low-density lipoprotein receptor-related protein 1 515 kDa subunit;
LRP-515;
Low-density lipoprotein receptor-related protein 1 intracellular domain;
LRPICD;
P08920
(CD2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
T-cell surface antigen CD2;
LFA-2;
LFA-3 receptor;
Lymphocyte antigen 37;
T-cell surface antigen T11/Leu-5;
CD2;
Q8BHD8
(PCMD2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Protein-L-isoaspartate O-methyltransferase domain-containing protein 2;
Q99K99
(PGKA1_MOUSE)
Swiss-ProtMus musculus
(Mouse)
PDCD10 and GCKIII kinases-associated protein 1;
Q9R0M8
(S35A2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
UDP-galactose translocator;
Solute carrier family 35 member A2;
UDP-galactose transporter;
P15499
(PRPH2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Peripherin-2;
Retinal degeneration slow protein;
Q9ESK4
(ING2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Inhibitor of growth protein 2;
Inhibitor of growth 1-like protein;
p33ING2;
Q9Z1V0
(OR6E1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Olfactory receptor 6E1;
Olfactory receptor 118-1;
Olfactory receptor 49;
Olfactory receptor I-C6;
Q9QXV9
(SPY1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Protein sprouty homolog 1;
Q9D0D4
(DIM1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Dimethyladenosine transferase;
18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase;
18S rRNA dimethylase;
DIM1 dimethyladenosine transferase 1 homolog;
DIM1 dimethyladenosine transferase 1-like;
S-adenosylmethionine-6-N',N'-adenosyl(rRNA) dimethyltransferase;
P31311
(HXA11_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Homeobox protein Hox-A11;
Homeobox protein Hox-1.9;
Q9EP89
(LACTB_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Serine beta-lactamase-like protein LACTB, mitochondrial;
Q8VC31
(CCDC9_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Coiled-coil domain-containing protein 9;
P56564
(EAA1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Excitatory amino acid transporter 1;
Glial high affinity glutamate transporter;
High-affinity neuronal glutamate transporter;
Sodium-dependent glutamate/aspartate transporter 1;
Solute carrier family 1 member 3;
Q9Z273
(TULP1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Tubby-related protein 1;
Tubby-like protein 1;
Q9D5W4
(CCD81_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Coiled-coil domain-containing protein 81;
Q60850
(S23A3_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Solute carrier family 23 member 3;
Na(+)/L-ascorbic acid transporter 3;
Sodium-dependent vitamin C transporter 3;
Yolk sac permease-like molecule 1;
Q8K1J6
(TRNT1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
CCA tRNA nucleotidyltransferase 1, mitochondrial;
mitochondrial tRNA nucleotidyl transferase, CCA-adding;
P34022
(RANG_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Ran-specific GTPase-activating protein;
HpaII tiny fragments locus 9a protein;
Ran-binding protein 1;
Q8R1Y2
(MERB1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
bMERB domain-containing protein 1;
Uncharacterized protein C16orf45 homolog;
Q8BPA8
(DPCD_MOUSE)
Swiss-ProtMus musculus
(Mouse)
Protein DPCD;
Q8BWR2
(PITH1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
PITH domain-containing protein 1;
Q9JJK2
(LANC2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
LanC-like protein 2;
Testis-specific adriamycin sensitivity protein;
Q61735
(CD47_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Leukocyte surface antigen CD47;
Integrin-associated protein;
CD47;
Q4KL35
(MAGIX_MOUSE)
Swiss-ProtMus musculus
(Mouse)
PDZ domain-containing protein MAGIX;
Q9D994
(WDR38_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
WD repeat-containing protein 38;
Q99MZ7
(PECR_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Peroxisomal trans-2-enoyl-CoA reductase;
P25233
(NECD_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Necdin;
Q99KE3
(DOK4_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Docking protein 4;
Downstream of tyrosine kinase 4;
Q9JII6
(AK1A1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Aldo-keto reductase family 1 member A1;
Alcohol dehydrogenase [NADP(+)];
Aldehyde reductase;
Glucuronate reductase;
Glucuronolactone reductase;
S-nitroso-CoA reductase;
O09113
(OTP_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Homeobox protein orthopedia;
Q64732
(FOXB1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Forkhead box protein B1;
Transcription factor FKH-5;
Q91Z92
(B3GT6_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Beta-1,3-galactosyltransferase 6;
GAG GalTII;
Galactosyltransferase II;
Galactosylxylosylprotein 3-beta-galactosyltransferase;
UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 6;
Q60935
(NAR1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
GPI-linked NAD(P)(+)--arginine ADP-ribosyltransferase 1;
ADP-ribosyltransferase C2 and C3 toxin-like 1;
Mono(ADP-ribosyl)transferase 1;
YAC-1;
CD296;
Q60880
(OL141_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Olfactory receptor 5T18;
Olfactory receptor 141;
Olfactory receptor 4B;
P41149
(MC5R_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Melanocortin receptor 5;
Q9D0M3
(CY1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Cytochrome c1, heme protein, mitochondrial;
Complex III subunit 4;
Complex III subunit IV;
Cytochrome b-c1 complex subunit 4;
Ubiquinol-cytochrome-c reductase complex cytochrome c1 subunit;
Q06986
(SIAH2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
E3 ubiquitin-protein ligase SIAH2;
RING-type E3 ubiquitin transferase SIAH2;
Seven in absentia homolog 2;
Q8CJ91
(C209B_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
CD209 antigen-like protein B;
DC-SIGN-related protein 1;
OtB7;
CD209;
P01868
(IGHG1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Ig gamma-1 chain C region secreted form;
Q19A41
(KLF14_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Krueppel-like factor 14;
Q64374
(RGN_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Regucalcin;
Gluconolactonase;
Senescence marker protein 30;
Q9DCK4
(ZN414_MOUSE)
Swiss-ProtMus musculus
(Mouse)
Zinc finger protein 414;
Q91WK7
(ANR54_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Ankyrin repeat domain-containing protein 54;
Lyn-interacting ankyrin repeat protein;
P14428
(HA1Q_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
H-2 class I histocompatibility antigen, K-Q alpha chain;
Q8BG50
(TM169_MOUSE)
Swiss-ProtMus musculus
(Mouse)
Transmembrane protein 169;
Q8R5M0
(GIPC3_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
PDZ domain-containing protein GIPC3;
Regulator of G-protein signaling 19-interacting protein 3;
P08101
(FCGR2_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Low affinity immunoglobulin gamma Fc region receptor II;
Fc gamma receptor IIB;
IgG Fc receptor II beta;
Lymphocyte antigen 17;
CD32;
Q91V64
(ISOC1_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Isochorismatase domain-containing protein 1;
Q99LJ8
(NGBR_MOUSE)
Swiss-Prot
Mus musculus
(Mouse)
Dehydrodolichyl diphosphate synthase complex subunit Nus1;
Nogo-B receptor;
Nuclear undecaprenyl pyrophosphate synthase 1 homolog;
1 - 50 of 85916
Mus musculus (Mouse)

The house mouse (Mus musculus) is a small mammal of the order Rodentia, characteristically having a pointed snout, small rounded ears, and a long naked or almost hairless tail. House mice thrive under a variety of conditions; they are found in and around homes and commercial structures, as well as in open fields and agricultural lands where they build underground gangways and nests.

Mus musculus is one of the most important model organisms in biology and medicine. Mice are biologically similar to humans and are thus good models for genetic diseases and research on the immune system.

The complete mouse reference genome was sequenced in 2002.

"Mus musculus", Wikipedia: The Free Encyclopedia

Protein models in Repository

From left to right: i) The number of proteins in the reference proteome of Mus musculus, ii) the number of unique protein sequences for which at least one model is available, iii) the total number of models and iv) a coverage bar plot is shown.
The bar plot shows the coverage for every protein in the reference proteome of Mus musculus for which there is at least one model. Different colours (dark green to red boxes) represent the coverage of the targets. Targets with high coverage are represented in dark green (more than 80% of the target's length is covered by models), whereas low coverage is shown in red. The size of each box is proportional to the number of target sequences with a given coverage.

For information on the latest proteome for Mus musculus, please visit UniProtKB.

You can easily download the latest protein sequences for Mus musculus proteome here. Please note this download is for the current UniProtKB release, which may be different to release 2025_03 that was used for the most up to date SWISS-MODEL Repository.

Proteins in proteomeSequences modelledModels
21,80319,10343,738

Detailed coverage numbers are obtained by hovering the mouse over one of the boxes.

Structural Coverage

The plot shows the evolution over years (x-axis) of the fraction of Mus musculus reference proteome residues (y-axis) for which structural information is available. Different colors (light blue to dark blue) in the plot represent the quality of the sequence alignment between the reference proteome sequences (targets) and the sequences of the proteins in the structure database (templates). Alignments with low sequence identity are displayed in light blue, whereas alignments with high sequence identity are depicted in dark blue. The SWISS-MODEL Template Library is used as database of templates. Only target-template alignments found by HHblits and only residues with atom coordinates are considered.

Residue Coverage

This chart shows the percentage of residues in the Mus musculus proteome which are covered by experimental structures and the enhancement of coverage by homology modelling by the SWISS-MODEL pipeline. Experimental residue coverage is determined using SIFTS mapping. For residues which are not covered by experimental structures (including where there are no atom records in SIFTS mapping) the model coverage bars are coloured by QMEANDisCo local quality score.

Oligomeric State

Many proteins form oligomeric structures either by self-assembly (homo-oligomeric) or by assembly with other proteins (hetero-oligomeric) to accomplish their function. In SWISS-MODEL Repository, the quaternary structure annotation of the template is used to model the target sequence in its oligomeric form. Currently our method is limited to the modelling of homo-oligomeric assemblies. The oligomeric state of the template is only considered if the interface is conserved.

Single Chain2-mer3-mer4-mer5-mer6-mer7-mer8-mer9-mer10-mer11-mer12-mer14-mer16-mer18-mer20-mer21-mer24-mer25-mer32-mer34-mer36-mer39-mer40-mer44-mer46-mer48-mer60-mer62-mer
38,9153,43929865659144215022184741433118411117114113
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