UniProtKB AC (Name) | UniProtKB Section | Organism | Description | |
---|---|---|---|---|
P62947 (RL41_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | 60S ribosomal protein L41; | |
P62892 (RL39_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | 60S ribosomal protein L39; | |
Q923J1 (TRPM7_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Transient receptor potential cation channel subfamily M member 7; Channel-kinase 1; Long transient receptor potential channel 7; Transient receptor potential-phospholipase C-interacting kinase; | |
Q3UHK6 (TEN4_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Teneurin-4; Downstream of CHOP4; Protein Odd Oz/ten-m homolog 4; Tenascin-M4; Teneurin transmembrane protein 4; | |
Q6WKZ8 (UBR2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | E3 ubiquitin-protein ligase UBR2; N-recognin-2; RING-type E3 ubiquitin transferase UBR2; Ubiquitin-protein ligase E3-alpha-2; Ubiquitin-protein ligase E3-alpha-II; | |
P56716 (RP1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Oxygen-regulated protein 1; Retinitis pigmentosa RP1 protein homolog; | |
O35600 (ABCA4_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Retinal-specific phospholipid-transporting ATPase ABCA4; ATP-binding cassette sub-family A member 4; RIM ABC transporter; Retinal-specific ATP-binding cassette transporter; | |
O88207 (CO5A1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Collagen alpha-1(V) chain; | |
B2RWS6 (EP300_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Histone acetyltransferase p300; E1A-associated protein p300; Histone butyryltransferase p300; Histone crotonyltransferase p300; Protein 2-hydroxyisobutyryltransferase p300; Protein lactyltransferas p300; Protein propionyltransferase p300; | |
Q3TLH4 (PRC2C_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Protein PRRC2C; BAT2 domain-containing protein 1; HLA-B-associated transcript 2-like 2; Proline-rich and coiled-coil-containing protein 2C; | |
E9Q557 (DESP_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Desmoplakin; | |
Q8BX70 (VP13C_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Intermembrane lipid transfer protein VPS13C; Vacuolar protein sorting-associated protein 13C; | |
Q9QXS1 (PLEC_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Plectin; Plectin-1; Plectin-6; | |
Q9JHU4 (DYHC1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Cytoplasmic dynein 1 heavy chain 1; Cytoplasmic dynein heavy chain 1; Dynein heavy chain, cytosolic; | |
Q9ERU9 (RBP2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | E3 SUMO-protein ligase RanBP2; Ran-binding protein 2; | |
Q8BHX3 (BOREA_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Borealin; Cell division cycle-associated protein 8; MESrg; | |
P42125 (ECI1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Enoyl-CoA delta isomerase 1, mitochondrial; 3,2-trans-enoyl-CoA isomerase; Delta(3),Delta(2)-enoyl-CoA isomerase; Dodecenoyl-CoA isomerase; | |
Q8BVD7 (C1QT7_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Complement C1q tumor necrosis factor-related protein 7; | |
Q9R059 (FHL3_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Four and a half LIM domains protein 3; Skeletal muscle LIM-protein 2; | |
Q9JK23 (PSMG1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Proteasome assembly chaperone 1; Down syndrome critical region protein 2 homolog; | |
Q64704 (STX3_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Syntaxin-3; | |
Q8CDN6 (TXNL1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Thioredoxin-like protein 1; 32 kDa thioredoxin-related protein; | |
O89100 (GRAP2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | GRB2-related adaptor protein 2; Adapter protein GRID; GADS protein; GRB-2-like protein; GRB-2-related monocytic adapter protein; GRBLG; Growth factor receptor-binding protein; Hematopoietic cell-associated adaptor protein GrpL; | |
Q9D1M0 (SEC13_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Protein SEC13 homolog; GATOR complex protein SEC13; SEC13-like protein 1; SEC13-related protein; | |
Q9JHJ8 (ICOSL_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | ICOS ligand; B7 homolog 2; B7-like protein Gl50; B7-related protein 1; LICOS; CD275; | |
Q8R2F2 (DEGS2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Sphingolipid delta(4)-desaturase/C4-monooxygenase DES2; Degenerative spermatocyte homolog 2; Sphingolipid 4-desaturase; Sphingolipid C4-monooxygenase; | |
Q8K023 (AKC1H_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Aldo-keto reductase family 1 member C18; 20-alpha-hydroxysteroid dehydrogenase; | |
Q5HZH2 (TSR3_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | 18S rRNA aminocarboxypropyltransferase; 20S S rRNA accumulation protein 3 homolog; | |
O09005 (DEGS1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Sphingolipid delta(4)-desaturase DES1; Degenerative spermatocyte homolog 1; Dihydroceramide desaturase-1; Retinol isomerase; | |
Q9QY73 (TMM59_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Transmembrane protein 59; Thymic dendritic cell-derived factor 1; | |
Q8BHK1 (NIPA1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Magnesium transporter NIPA1; Non-imprinted in Prader-Willi/Angelman syndrome region protein 1 homolog; | |
Q3U1T3 (BRM1L_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Breast cancer metastasis-suppressor 1-like protein; | |
P58389 (PTPA_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Serine/threonine-protein phosphatase 2A activator; PP2A, subunit B', PR53 isoform; Phosphotyrosyl phosphatase activator; Serine/threonine-protein phosphatase 2A regulatory subunit 4; Serine/threonine-protein phosphatase 2A regulatory subunit B'; | |
Q8VC28 (AK1CD_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Aldo-keto reductase family 1 member C13; | |
P63087 (PP1G_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Serine/threonine-protein phosphatase PP1-gamma catalytic subunit; Protein phosphatase 1C catalytic subunit; | |
P33033 (MC3R_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Melanocortin receptor 3; | |
O35639 (ANXA3_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Annexin A3; 35-alpha calcimedin; Annexin III; Annexin-3; Lipocortin III; Placental anticoagulant protein III; | |
Q922B1 (MACD1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | ADP-ribose glycohydrolase MACROD1; MACRO domain-containing protein 1; O-acetyl-ADP-ribose deacetylase MACROD1; Protein LRP16; [Protein ADP-ribosylaspartate] hydrolase MACROD1; [Protein ADP-ribosylglutamate] hydrolase MACROD1; | |
P97401 (SFRP3_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Secreted frizzled-related protein 3; Frezzled; Fritz; Frizzled-related protein 1; FrzB-1; | |
P23813 (HXD11_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Homeobox protein Hox-D11; Homeobox protein Hox-4.6; Homeobox protein Hox-5.5; | |
O88602 (CCG2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Voltage-dependent calcium channel gamma-2 subunit; Neuronal voltage-gated calcium channel gamma-2 subunit; Stargazin; Transmembrane AMPAR regulatory protein gamma-2; | |
Q91WR5 (AK1CL_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Aldo-keto reductase family 1 member C21; 17-alpha-hydroxysteroid dehydrogenase; 3(or 17)-alpha-hydroxysteroid dehydrogenase; 3-alpha-hydroxysteroid dehydrogenase; Dihydrodiol dehydrogenase type 1; Dihydrodiol dehydrogenase type 3; | |
A4FUQ5 (FPRS4_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Formyl peptide receptor-related sequence 4; N-formylpeptide receptor-like 4; | |
Q9EQW6 (OLIG2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Oligodendrocyte transcription factor 2; | |
Q9DAP0 (LRC46_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Leucine-rich repeat-containing protein 46; | |
Q8BHZ0 (CYRIA_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | CYFIP-related Rac1 interactor A; | |
Q8R1Q9 (RBSK_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Ribokinase; | |
Q8VG03 (OL482_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Olfactory receptor 482; Olfactory receptor 204-14; | |
P52875 (TM165_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Transmembrane protein 165; TPA-regulated locus protein; Transmembrane protein PFT27; Transmembrane protein TPARL; | |
Q9D6M3 (GHC1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Mitochondrial glutamate carrier 1; Glutamate/H(+) symporter 1; Solute carrier family 25 member 22; |
The house mouse (Mus musculus) is a small mammal of the order Rodentia, characteristically having a pointed snout, small rounded ears, and a long naked or almost hairless tail. House mice thrive under a variety of conditions; they are found in and around homes and commercial structures, as well as in open fields and agricultural lands where they build underground gangways and nests.
Mus musculus is one of the most important model organisms in biology and medicine. Mice are biologically similar to humans and are thus good models for genetic diseases and research on the immune system.
The complete mouse reference genome was sequenced in 2002.
From left to right: i) The number of proteins in the reference proteome of Mus musculus, ii) the number of unique protein sequences for which at least one model is available, iii) the total number of models and iv) a coverage bar plot is shown.
The bar plot shows the coverage for every protein in the reference proteome of Mus musculus for which there is at least one model. Different colours (dark green to red boxes) represent the coverage of the targets. Targets with high coverage are represented in dark green (more than 80% of the target's length is covered by models), whereas low coverage is shown in red. The size of each box is proportional to the number of target sequences with a given coverage.
For information on the latest proteome for Mus musculus, please visit UniProtKB.
You can easily download the latest protein sequences for Mus musculus proteome here. Please note this download is for the current UniProtKB release, which may be different to release 2023_02 that was used for the most up to date SWISS-MODEL Repository.
Proteins in proteome | Sequences modelled | Models |
21,957 | 18,621 | 41,800 |
Detailed coverage numbers are obtained by hovering the mouse over one of the boxes.
The plot shows the evolution over years (x-axis) of the fraction of Mus musculus reference proteome residues (y-axis) for which structural information is available. Different colors (light blue to dark blue) in the plot represent the quality of the sequence alignment between the reference proteome sequences (targets) and the sequences of the proteins in the structure database (templates). Alignments with low sequence identity are displayed in light blue, whereas alignments with high sequence identity are depicted in dark blue. The SWISS-MODEL Template Library is used as database of templates. Only target-template alignments found by HHblits and only residues with atom coordinates are considered.
This chart shows the percentage of residues in the Mus musculus proteome which are covered by experimental structures and the enhancement of coverage by homology modelling by the SWISS-MODEL pipeline. Experimental residue coverage is determined using SIFTS mapping. For residues which are not covered by experimental structures (including where there are no atom records in SIFTS mapping) the model coverage bars are coloured by QMEANDisCo local quality score.
Many proteins form oligomeric structures either by self-assembly (homo-oligomeric) or by assembly with other proteins (hetero-oligomeric) to accomplish their function. In SWISS-MODEL Repository, the quaternary structure annotation of the template is used to model the target sequence in its oligomeric form. Currently our method is limited to the modelling of homo-oligomeric assemblies. The oligomeric state of the template is only considered if the interface is conserved.
Single Chain | 2-mer | 3-mer | 4-mer | 5-mer | 6-mer | 7-mer | 8-mer | 9-mer | 10-mer | 11-mer | 12-mer | 13-mer | 16-mer | 18-mer | 20-mer | 21-mer | 24-mer | 25-mer | 26-mer | 32-mer | 33-mer | 36-mer | 39-mer | 40-mer | 48-mer | 55-mer | 56-mer | 60-mer | 62-mer |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
36,866 | 3,589 | 293 | 666 | 52 | 121 | 22 | 32 | 3 | 27 | 11 | 37 | 1 | 25 | 3 | 1 | 1 | 22 | 4 | 2 | 1 | 1 | 2 | 1 | 1 | 5 | 2 | 5 | 1 | 3 |