A0A142I5B9 (POLG_ZIKVK) Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010) (ZIKV)

Genome polyprotein UniProtKBInterProInteractive Modelling

3423 aa; Sequence (Fasta) Identical sequences: Zika virus: A0A2S1Q2P2

Sequence Features

 1553Charge relay system; for serine protease NS3 activity.
 1577Charge relay system; for serine protease NS3 activity.
 1637Charge relay system; for serine protease NS3 activity.
 2581For 2'-O-MTase activity.
 2666For 2'-O-MTase activity.
 2702For 2'-O-MTase activity.
 2738For 2'-O-MTase activity.
 2959Zinc 1.
 2963Zinc 1; via tele nitrogen.
 2968Zinc 1.
 2971Zinc 1.
 3234Zinc 2; via tele nitrogen.
 3250Zinc 2.
 3369Zinc 2.
 1958Involved in NS3 ATPase and RTPase activities.
 1961Involved in NS3 ATPase and RTPase activities.
 2533mRNA cap binding.
 2536mRNA cap binding; via carbonyl oxygen.
 2537mRNA cap binding.
 2539mRNA cap binding; via carbonyl oxygen.
 2544mRNA cap binding.
 2548mRNA cap binding.
 2581Essential for 2'-O-methyltransferase activity.
 2666Essential for 2'-O-methyltransferase and N-7 methyltransferase activity.
 2670mRNA cap binding.
 2702Essential for 2'-O-methyltransferase activity.
 2733mRNA cap binding.
 2735mRNA cap binding.
 2738Essential for 2'-O-methyltransferase activity.
 105-125Helical.
 250-269Helical.
 275-290Helical.
 746-767Helical.
 774-794Helical.
 1178-1198Helical.
 1221-1241Helical.
 1271-1291Helical.
 1296-1316Helical.
 1346-1366Helical.
 1374-1394Helical.
 1398-1418Helical.
 1473-1493Helical.
 2171-2191Helical.
 2196-2216Helical.
 2219-2239Helical.
 2255-2269Helical; Note=Signal for NS4B.
 2308-2328Helical.
 2345-2365Helical.
 2376-2396Helical.
 2442-2462Helical.
 1696-1703ATP.
 2533-2539GTP.
 2669-2675GTP.
 2733-2735GTP.
 104-105Cleavage; by viral protease NS3.
 122-123Cleavage; by host signal peptidase.
 215-216Cleavage; by host furin.
 290-291Cleavage; by host signal peptidase.
 794-795Cleavage; by host signal peptidase.
 1146-1147Cleavage; by host.
 1372-1373Cleavage; by viral protease NS3.
 1502-1503Cleavage; by autolysis.
 2119-2120Cleavage; by autolysis.
 2246-2247Cleavage; by viral protease NS3.
 2269-2270Cleavage; by host signal peptidase.
 2520-2521Cleavage; by viral protease NS3.
 350-406
 382-411
 480-581
 598-629
 798-809
 849-937
 973-1017
 1074-1123
 1085-1106
 1107-1110
 6-122Flavivirus capsid protein C
IPR001122PF01003
 128-214Flavivirus polyprotein propeptide
IPR002535PF01570
 217-290Envelope glycoprotein M, flavivirus
IPR000069PF01004
 292-592Flavivirus glycoprotein central and dim erisation domain
IPR011998PF00869
 594-692Flavivirus glycoprotein E, immunoglobuli n-like domain
IPR027287PF02832
 797-1148Flavivirus non-structural protein NS1
IPR001157PF00948
 1158-1310Flavivirus non-structural protein NS2A
IPR000752PF01005
 1378-1502Flavivirus non-structural protein NS2B
IPR000487PF01002
 1519-1669Flavivirus NS3, petidase S7
IPR001850PF00949
 1687-1833DEAD box, Flavivirus
IPR011492PF07652
 2126-2268Flavivirus non-structural protein NS4A
IPR000404PF01350
 2270-2510Flavivirus non-structural protein NS4B
IPR001528PF01349
 2575-2743Ribosomal RNA methyltransferase FtsJ dom ain
IPR002877PF01728
 2772-3416RNA-directed RNA polymerase, flavivirus
IPR000208PF00972

Sequence Alignments

Homology models

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownloadAssess
monomer -0.345yw1.1.A1506-2119
67.69
monomer MN;-0.732whx.1.A1523-2119
68.02
monomer ZN;SAH;-1.345tfr.1.A2526-3407
95.79
monomer -2.162wv9.1.A1420-2118
65.28