A0A142I5B9 (POLG_ZIKVK) Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010) (ZIKV)

Genome polyprotein UniProtKBInterProInteractive Modelling

3423 aa; Sequence (Fasta) Identical sequences: Zika virus: A0A2S1Q2P2

Molecule Processing
Capsid protein C
Protein prM
Peptide pr
Small envelope protein M
Envelope protein E
Non-structural protein 1
Non-structural protein 2A
Serine protease subunit NS2B
Serine protease NS3
Non-structural protein 4A
Non-structural protein 4B
RNA-directed RNA polymerase NS5

Sequence Features

 1553Charge relay system; for serine protease NS3 activity
 1577Charge relay system; for serine protease NS3 activity
 1637Charge relay system; for serine protease NS3 activity
 2581For 2'-O-MTase activity
 2666For 2'-O-MTase activity
 2702For 2'-O-MTase activity
 2738For 2'-O-MTase activity
 2959Zinc 1
 2963Zinc 1; via tele nitrogen
 2968Zinc 1
 2971Zinc 1
 3234Zinc 2; via tele nitrogen
 3250Zinc 2
 3369Zinc 2
 1958Involved in NS3 ATPase and RTPase activities
 1961Involved in NS3 ATPase and RTPase activities
 2533mRNA cap binding
 2536mRNA cap binding; via carbonyl oxygen
 2537mRNA cap binding
 2539mRNA cap binding; via carbonyl oxygen
 2544mRNA cap binding
 2548mRNA cap binding
 2581Essential for 2'-O-methyltransferase activity
 2666Essential for 2'-O-methyltransferase and N-7 methyltransferase activity
 2670mRNA cap binding
 2702Essential for 2'-O-methyltransferase activity
 2733mRNA cap binding
 2735mRNA cap binding
 2738Essential for 2'-O-methyltransferase activity
 105-125Helical
 250-269Helical
 275-290Helical
 746-767Helical
 774-794Helical
 1178-1198Helical
 1221-1241Helical
 1271-1291Helical
 1296-1316Helical
 1346-1366Helical
 1374-1394Helical
 1398-1418Helical
 1473-1493Helical
 2171-2191Helical
 2196-2216Helical
 2219-2239Helical
 2255-2269Helical; Note=Signal for NS4B
 2308-2328Helical
 2345-2365Helical
 2376-2396Helical
 2442-2462Helical
 1696-1703ATP
 2533-2539GTP
 2669-2675GTP
 2733-2735GTP
 104-105Cleavage; by viral protease NS3
 122-123Cleavage; by host signal peptidase
 215-216Cleavage; by host furin
 290-291Cleavage; by host signal peptidase
 794-795Cleavage; by host signal peptidase
 1146-1147Cleavage; by host
 1372-1373Cleavage; by viral protease NS3
 1502-1503Cleavage; by autolysis
 2119-2120Cleavage; by autolysis
 2246-2247Cleavage; by viral protease NS3
 2269-2270Cleavage; by host signal peptidase
 2520-2521Cleavage; by viral protease NS3
 350-406
 382-411
 480-581
 598-629
 798-809
 849-937
 973-1017
 1074-1123
 1085-1106
 1107-1110
 6-122Flavivirus capsid protein C
IPR001122PF01003
 128-214Flavivirus polyprotein propeptide
IPR002535PF01570
 217-290Envelope glycoprotein M, flavivirus
IPR000069PF01004
 292-592Flavivirus glycoprotein central and dimerisation domain
IPR011998PF00869
 594-692Flavivirus glycoprotein E, immunoglobulin-like domain
IPR027287PF02832
 797-1148Flavivirus non-structural protein NS1
IPR001157PF00948
 1158-1310Flavivirus non-structural protein NS2A
IPR000752PF01005
 1378-1502Flavivirus non-structural protein NS2B
IPR000487PF01002
 1519-1669Flavivirus NS3, petidase S7
IPR001850PF00949
 1687-1833DEAD box, Flavivirus
IPR011492PF07652
 2126-2268Flavivirus non-structural protein NS4A
IPR000404PF01350
 2270-2510Flavivirus non-structural protein NS4B
IPR001528PF01349
 2575-2743Ribosomal RNA methyltransferase FtsJ domain
IPR002877PF01728
 2772-3416RNA-directed RNA polymerase, flavivirus
IPR000208PF00972

Sequence Alignments

Envelope protein E 291-794; PRO_0000445665

DescriptionOligo-stateLigandsStructureRangeDownloadAssess
Crystal structure of Z004 iGL Fab in complex with ZIKV EDIII Heteromer
6uta 594-694

Serine protease NS3 1503-2119; PRO_0000445669

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)DownloadAssess
monomer 1×MN;-0.902whx.1.A1523-2119
68.02
monomer -0.465yw1.1.A1506-2119
67.69

RNA-directed RNA polymerase NS5 2521-3423; PRO_0000445673

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)DownloadAssess
monomer 1×SAH; 2×ZN;-1.385tfr.1.A2526-3407
95.79