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A0A663D5Y6 (A0A663D5Y6_PONAB) Pongo abelii (Sumatran orangutan) (Pongo pygmaeus abelii)

Mediator of RNA polymerase II transcription subunit 28 UniProtKBInterProInteractive Modelling

178 aa; Sequence (Fasta) ; 4 identical sequences: Homo sapiens: Q9H204; Pan troglodytes: K7BCC3, A0A6D2VU05; Gorilla gorilla gorilla: G3QFM0

Available Structures

7 Experimental Structures

DescriptionPDB IDOligo-stateRangeSeq id (%)Ligands
CryoEM structure of TR-TRAP
8t9d
 Heteromer
O43513; O60244; O75448; O75586; Q13503; Q15528; Q15648; Q6P2C8; Q71SY5; Q96G25; Q96HR3; Q96RN5; Q9BTT4; Q9BUE0; Q9H204; Q9H944; Q9NPJ6; Q9NVC6; Q9NWA0; Q9NX70; Q9P086; Q9UHV7; Q9ULK4; Q9Y2X0; Q9Y3C7; 		32-149
100
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Structure Assessment
Structure of the human Mediator-bound transcription pre-initiation complex
7lbm
 Heteromer
A0JLT2; O15514; O43513; O60244; O75448; O75586; P13984; P18074; P19387; P19388; P19447; P20226; P24928; P29083; P29084; P30876; P32780; P35269; P36954; P50613; P51946; P51948; P52434; P52435; P52655; P52657; P53803; P61218; P62487; P62875; Q00403; Q13503; Q13888; Q13889; Q15528; Q6P2C8; Q6ZYL4; Q71SY5; Q92759; Q96G25; Q96HR3; Q96RN5; Q9BTT4; Q9BUE0; Q9H204; Q9H944; Q9NPJ6; Q9NVC6; Q9NWA0; Q9NX70; Q9P086; Q9ULK4; Q9Y2X0; Q9Y3C7; 		42-149
1002×MG; 16×ZN; 1×SF4;
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Structure Assessment
Human Mediator (deletion of MED1-IDR) in a Tail-extended conformation
7emf
 Heteromer
A0JLT2; O43513; O60244; O75448; O75586; O95402; Q13503; Q15528; Q15648; Q6P2C8; Q71SY5; Q96G25; Q96HR3; Q96RN5; Q9BTT4; Q9BUE0; Q9H204; Q9H944; Q9NPJ6; Q9NVC6; Q9NWA0; Q9NX70; Q9P086; Q9ULK4; Q9Y2X0; Q9Y3C7; 		42-146
100.02×ZN;
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Structure Assessment
Human Mediator (deletion of MED1-IDR) in a Tail-bent conformation (MED-B)
7enj
 Heteromer
A0JLT2; O43513; O60244; O75448; O75586; O95402; Q13503; Q15528; Q15648; Q6P2C8; Q96G25; Q96HR3; Q96RN5; Q9BTT4; Q9BUE0; Q9H204; Q9H944; Q9NPJ6; Q9NVC6; Q9NWA0; Q9NX70; Q9P086; Q9ULK4; Q9Y2X0; Q9Y3C7; 		42-146
100.01×ZN;
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Structure Assessment
Structure of human transcriptional Mediator complex
8tqw
 Heteromer
A0JLT2; O43513; O60244; O75448; O75586; P24863; P49336; Q13503; Q15528; Q15648; Q6P2C8; Q93074; Q96G25; Q96HR3; Q96RN5; Q9BTT4; Q9BUE0; Q9H204; Q9H944; Q9NPJ6; Q9NVC6; Q9NWA0; Q9NX70; Q9P086; Q9UHV7; Q9ULK4; Q9Y2X0; Q9Y3C7; 		42-146
100.04×ZN;
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Structure Assessment
The IDRc bound human core Mediator complex
8trh
 Heteromer
A0JLT2; O43513; O60244; O75448; O75586; Q13503; Q15528; Q15648; Q6P2C8; Q96G25; Q96HR3; Q96RN5; Q9BTT4; Q9BUE0; Q9H204; Q9H944; Q9NPJ6; Q9NVC6; Q9NWA0; Q9NX70; Q9P086; Q9UHV7; Q9ULK4; Q9Y2X0; Q9Y3C7; 		42-146
100.02×ZN;
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Structure Assessment
Human Mediator with RNA Polymerase II Pre-initiation complex
7nvr
 Heteromer
A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; A0A7M4DUC2; A0JLT2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O43513; O60244; O75586; P13984; P18074; P19447; P20226; P29083; P29084; P32780; P35269; P50613; P51946; P51948; P52655; P52657; P60899; Q00403; Q13503; Q13888; Q13889; Q15528; Q6P2C8; Q6ZYL4; Q92759; Q96G25; Q96HR3; Q9BTT4; Q9BUE0; Q9H204; Q9H944; Q9NPJ6; Q9NVC6; Q9NWA0; Q9P086; Q9Y3C7; 		82-150
1001×SF4; 18×ZN; 1×MG;
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Structure Assessment

3 SWISS-MODEL models

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
8t1i.1.Wmonomer0.6332-149
94.38
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Model report
Structure Assessment
1yke.1.Bmonomer0.6143-145
12.00
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Model report
Structure Assessment
8j07.837.Amonomer0.5450-123
19.44
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Model report
Structure Assessment