A0A8I5TNR8 (A0A8I5TNR8_PONAB) Pongo abelii (Sumatran orangutan) (Pongo pygmaeus abelii)
TAR DNA-binding protein 43 UniProtKBInterProInteractive Modelling
414 aa; Sequence (Fasta) ;
4 identical sequences: Homo sapiens: Q13148; Pan troglodytes: H2PY00, A0A6D2XRF9; Pan paniscus: A0A2R9C1F8
It is possible new templates exist for this target since these models were created.
Available Structures
44 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Seq id (%) | Ligands | |
|---|---|---|---|---|---|---|
| Solution structure of TDP-43 N-terminal domain dimer. |
Heteromer Q13148; | 98.75 | ||||
| Structure of heteromeric amyloid filament of TDP-43 and AXNA11 from FTLD-TDP Type C (variant 2) |
Heteromer P50995; Q13148; | 100 | ||||
| Structure of heteromeric amyloid filament of TDP-43 and AXNA11 from FTLD-TDP Type C (variant 1) |
Heteromer P50995; Q13148; | 100 | ||||
| SegA-long, conformation of TDP-43 low complexity domain segment A long |
Heteromer Q13148; | 100 | ||||
| Structure of the mammalian importin a1 bound to the TDP-43 NLS |
Heteromer P52292; Q13148; | 100 | ||||
| SegB, conformation of TDP-43 low complexity domain segment A | homo-20-mer | 96.88 | ||||
| SWGMMGMLASQ segment from the low complexity domain of TDP-43 | homo-20-mer | 100 | ||||
| TDP-43 amyloid fibrils: Morphology-2 | homo-18-mer | 100 | ||||
| Crystal structure of the segment, NFGAFS, from the low complexity domain of TDP-43, residues 312-317 | homo-15-mer | 100 | ||||
| TDP-43 amyloid fibrils: Morphology-1a | homo-12-mer | 100 | ||||
| TDP-43 amyloid fibrils: Morphology-1b | homo-12-mer | 100 | ||||
| Crystal structure of the segment, LIIKGI, from the RRM2 of TDP-43, residues 248-253 | homo-12-mer | 100 | ||||
| SegA-asym, conformation of TDP-43 low complexity domain segment A asym | homo-10-mer | 100 | ||||
| SegA-sym, conformation of TDP-43 low complexity domain segment A sym | homo-10-mer | 100 | ||||
| MicroED structure of the segment, DLIIKGISVHI, from the RRM2 of TDP-43, residues 247-257 | homo-10-mer | 100 | ||||
| Crystal structure of the segment, GFNGGFG, from the low complexity domain of TDP-43, residues 396-4… | homo-10-mer | 100 | ||||
| Crystal structure of the segment, GNNQGSN, from the low complexity domain of TDP-43, residues 300-3… | homo-10-mer | 100 | ||||
| Crystal structure of the segment, NFGTFS, from the A315T familial variant of the low complexity dom… | homo-10-mer | 83.33 | ||||
| Crystal structure of the segment, GNNSYS, from the low complexity domain of TDP-43, residues 370-375 | homo-10-mer | 100 | ||||
| Segment NFGTFS, with familial mutation A315T and phosphorylated threonine, from the low complexity … | homo-10-mer | 83.33 | ||||
| MicroED structure of the segment, NFGEFS, from the A315E familial variant of the low complexity dom… | homo-10-mer | 83.33 | ||||
| CryoEM structure of the segment, DLIIKGISVHI, assembled into a triple-helical fibril | homo-9-mer | 100 | ||||
| TDP-43 LCD amyloid fibrils | homo-5-mer | 100 | ||||
| Structure of TDP-43 amyloid filament from type A FTLD-TDP (variant 1) | homo-5-mer | 100 | ||||
| Structure of TDP-43 amyloid filament from type A FTLD-TDP (variant 2) | homo-5-mer | 100 | ||||
| Structure of TDP-43 amyloid filament from type A FTLD-TDP (variant 3) | homo-5-mer | 100 | ||||
| Cryo-EM structure of TDP43 core peptide amyloid fiber | homo-5-mer | 100 | ||||
| Structure of pathological TDP-43 filaments from ALS with FTLD | homo-4-mer | 100 | ||||
| NMR structure of human TDP-43 tandem RRMs in complex with UG-rich RNA | monomer | 100 | ||||
| Solution structure of TDP-43 (residues 1-102) | monomer | 100 | ||||
| Solution structure of the RNA binding domain of TAR DNA-binding protein-43 | monomer | 100 | ||||
| Crystal structure of TDP-43 N-terminal domain at 2.1 A resolution | monomer | 100 | ||||
| CRYSTAL STRUCTURE OF HUMAN TDP-43 N-TERMINAL DOMAIN AT 2.55 A RESOLUTION | monomer | 100 | 1×SO4; | |||
| Crystal Structure of Human TDP-43 RRM1 Domain in Complex with an Unmodified Single-stranded DNA | monomer | 100 | ||||
| Crystal Structure of Human TDP-43 RRM1 Domain with D169G Mutation in Complex with an Unmodified Sin… | monomer | 98.72 | ||||
| Crystal Structure of Human TDP-43 RRM1 Domain in Complex with a Single-stranded DNA | monomer | 100 | ||||
| Solution Structure of the N-terminal Domain of TDP-43 | monomer | 97.4 | ||||
| Solution structure of the n-terminal domain of tdp-43 | monomer | 100 | ||||
| Solution structure of RRM domain in TAR DNA-binding protein-43 | monomer | 98.67 | ||||
| Solution Structure of the G335D Mutant of TDP-43 Amyloidogenic Core Region | monomer | 98.0 | ||||
| Solution Structure of the Q343R Mutant of TDP-43 Amyloidogenic Core Region | monomer | 98.0 | ||||
| Solution Structure of TDP-43 Amyloidogenic Core Region | monomer | 100 | ||||
| NMR Structure of TDP-43 prion-like hydrophobic helix in DPC | monomer | 100 | ||||
| Structure of the low complexity domain of TDP-43 (fragment 309-350) with methionine sulfoxide modif… | monomer | 100 | ||||
2 SWISS-MODEL models
| Template | Oligo-state | QMEAN | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 4bs2.1.A | monomer | 0.73 | 100.00 | |||
| 4pkd.1.B | monomer | 0.56 | 20.37 | |||