C4R370 (C4R370_KOMPG) Komagataella phaffii (strain GS115 / ATCC 20864) (Yeast) (Pichia pastoris)
Transcription elongation factor SPT5 UniProtKBInterProSTRINGInteractive Modelling
908 aa; Sequence (Fasta) ;
1 identical sequence: Komagataella phaffii: F2QUC3
It is possible new templates exist for this target since these models were created.
Available Structures
20 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Ligands | ||
|---|---|---|---|---|---|---|
| RNA polymerase II elongation complex transcribing a nucleosome (EC49) |
Heteromer C4QYQ8; C4QZ45; C4QZQ7; C4R009; C4R0E6; C4R1E6; C4R1V1; C4R273; C4R2U9; C4R3K1; C4R3P8; C4R3Z5; C4R4Y0; C4R6B2; C4R7H2; C4R7L2; C4R7L8; C4R997; C4R9A1; F2QMI1; F2QNN8; F2QPE6; F2QQ42; P04908; P06899; P62805; P84243; | 10×ZN; 1×MG; | ||||
| Assess | ||||||
| RNA polymerase II elongation complex transcribing a nucleosome (EC42) |
Heteromer C4QZ45; C4QZQ7; C4R009; C4R0E6; C4R1E6; C4R1V1; C4R273; C4R2U9; C4R3K1; C4R3P8; C4R3Z5; C4R4Y0; C4R6B2; C4R7H2; C4R7L2; C4R7L8; C4R997; C4R9A1; F2QMI1; F2QPE6; F2QQ42; P04908; P06899; P62805; P84243; | 10×ZN; 1×MG; | ||||
| Assess | ||||||
| RNA polymerase II elongation complex transcribing a nucleosome (EC115) |
Heteromer C4QZ45; C4QZQ7; C4R009; C4R0E6; C4R1E6; C4R1V1; C4R273; C4R2U9; C4R3K1; C4R3P8; C4R3Z5; C4R4Y0; C4R6B2; C4R7H2; C4R7L2; C4R7L8; C4R997; C4R9A1; F2QMI1; F2QPE6; F2QQ42; P04908; P06899; P62805; P84243; | 10×ZN; 1×MG; | ||||
| Assess | ||||||
| RNA polymerase II elongation complex containing Spt4/5, Elf1, Spt6, Spn1 and Paf1C |
Heteromer C4QZ45; C4QZQ7; C4R009; C4R0E6; C4R1E6; C4R1V1; C4R273; C4R2U9; C4R3K1; C4R3Z5; C4R4Y0; C4R6B2; C4R7H2; C4R7L2; C4R7L8; C4R997; C4R9A1; F2QMI1; F2QPE6; F2QQ42; F2QX94; | 10×ZN; 1×MG; | ||||
| Assess | ||||||
| RNA polymerase II elongation complex transcribing a nucleosome (EC49B) |
Heteromer C4QZ45; C4QZQ7; C4R009; C4R0E6; C4R1E6; C4R1V1; C4R273; C4R2U9; C4R3K1; C4R3P8; C4R3Z5; C4R4Y0; C4R6B2; C4R7H2; C4R7L2; C4R7L8; C4R997; C4R9A1; F2QMI1; F2QNN8; F2QPE6; F2QPX0; F2QQ42; P04908; P06899; P62805; P84243; | 10×ZN; 1×MG; | ||||
| Assess | ||||||
| RNA Polymerase II elongation complex bound with Spt4/5 and TFIIS |
Heteromer C4QWA8; C4QY79; C4QZQ7; C4R009; C4R0E6; C4R1V1; C4R273; C4R2R6; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; | 10×ZN; 1×MG; | ||||
| Assess | ||||||
| RNA polymerase II elongation complex transcribing a nucleosome (EC58oct) |
Heteromer C4QYQ8; C4QZ45; C4QZQ7; C4R009; C4R0E6; C4R1E6; C4R1V1; C4R273; C4R2U9; C4R3K1; C4R3P8; C4R3Z5; C4R4Y0; C4R6B2; C4R7H2; C4R7L2; C4R7L8; C4R997; C4R9A1; F2QMI1; F2QNN8; F2QPE6; F2QQ42; P04908; P06899; P62805; P84243; | 10×ZN; 1×MG; | ||||
| Assess | ||||||
| RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-1) of the nucleoso… |
Heteromer C4QZ45; C4QZQ7; C4R009; C4R0E6; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243; | 10×ZN; 1×MG; | ||||
| Assess | ||||||
| RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-1) of the nucleoso… |
Heteromer C4QZ45; C4QZQ7; C4R009; C4R0E6; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243; | 10×ZN; 1×MG; | ||||
| Assess | ||||||
| RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-5) of the nucleoso… |
Heteromer C4QZ45; C4QZQ7; C4R0E6; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; F2QTN1; P04908; P06899; P62805; P84243; | 10×ZN; 1×MG; | ||||
| Assess | ||||||
| RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-1) of the nucleoso… |
Heteromer C4QZ45; C4QZQ7; C4R009; C4R0E6; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243; | 10×ZN; 1×MG; | ||||
| Assess | ||||||
| RNA polymerase II elongation complex bound with Spt4/5 and foreign DNA, stalled at SHL(-1) of the n… |
Heteromer C4QZQ7; C4R009; C4R0E6; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243; | 9×ZN; 1×MG; | ||||
| Assess | ||||||
| RNA polymerase II elongation complex bound with Spt4/5 and foreign DNA, stalled at SHL(-1) of the n… |
Heteromer C4QZQ7; C4R009; C4R0E6; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243; | 9×ZN; 1×MG; | ||||
| Assess | ||||||
| RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-3.5) of the nucleo… |
Heteromer C4QZ45; C4QZQ7; C4R009; C4R0E6; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243; | 10×ZN; 1×MG; | ||||
| Assess | ||||||
| RNA polymerase II elongation complex bound with Spt4/5 and foreign DNA, stalled at SHL(-1) of the n… |
Heteromer C4QZ45; C4QZQ7; C4R009; C4R0E6; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243; | 10×ZN; 1×MG; | ||||
| Assess | ||||||
| RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-4) of the nucleoso… |
Heteromer C4QZ45; C4QZQ7; C4R009; C4R0E6; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243; | 10×ZN; 1×MG; | ||||
| Assess | ||||||
| RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-3) of the nucleoso… |
Heteromer C4QZ45; C4QZQ7; C4R009; C4R0E6; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243; | 10×ZN; 1×MG; | ||||
| Assess | ||||||
| RNA polymerase II elongation complex transcribing a nucleosome (EC58hex) |
Heteromer C4QYQ8; C4QZ45; C4QZQ7; C4R009; C4R0E6; C4R1E6; C4R1V1; C4R273; C4R2U9; C4R3K1; C4R3P8; C4R3Z5; C4R4Y0; C4R6B2; C4R7H2; C4R7L2; C4R7L8; C4R997; C4R9A1; F2QMI1; F2QNN8; F2QPE6; F2QQ42; P04908; P06899; P62805; P84243; | 10×ZN; 1×MG; | ||||
| Assess | ||||||
| RNA polymerase II elongation complex bound with Elf1, Spt4/5 and foreign DNA, stalled at SHL(-1) of… |
Heteromer C4QZ45; C4QZQ7; C4R009; C4R0E6; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243; | 10×ZN; 1×MG; | ||||
| Assess | ||||||
| RNA Polymerase II elongation complex bound with Spt5 KOW5 and Elf1 |
Heteromer A0A1B2JER8; C4QZQ7; C4R009; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; F2QUC3; | 9×ZN; 1×MG; 1×APC; | ||||
| Assess | ||||||
2 SWISS-MODEL models
| Template | Oligo-state | QMEANDisCo | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 5oik.1.Q | monomer | 0.60 | 32.04 | |||
| Assess | ||||||
| 6ted.1.X | monomer | 0.53 | 36.14 | |||
| Assess | ||||||