G2WDE3 (G2WDE3_YEASK) Saccharomyces cerevisiae (strain Kyokai no 7 / NBRC 101557) (Baker'syeast)

K7_Rpn11p UniProtKBInterProInteractive Modelling

306 aa; Sequence (Fasta) ; 9 identical sequences: Saccharomyces cerevisiae: N1P4N6, C8Z7T7, C7GYB0, P43588, B5VI30, A0ABF7PIX9, A7A242, B3LUL2; Saccharomyces pastorianus: A0A6C1DT11

Available Structures

37 Experimental Structures

DescriptionPDB IDOligo-stateRangeSeq id (%)Ligands
26S proteasome in presence of ATP (s1)
5mpd
 Heteromer
O13563; O94742; P32496; P32565; P38764; P38886; P40016; P43588; Q04062; Q06103; Q08723; Q12250; Q12377; 		18-306
100
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Structure Assessment
26S proteasome in presence of ATP (s2)
5mpe
 Heteromer
O13563; O94742; P32496; P32565; P38764; P38886; P40016; P43588; Q04062; Q06103; Q08723; Q12250; Q12377; 		18-306
100
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Structure Assessment
26S proteasome, s1 state
6fvt
 Heteromer
O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33297; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377; 		18-306
1005×ATP; 6×MG; 1×ADP;
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Structure Assessment
26S proteasome, s2 state
6fvu
 Heteromer
O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33297; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377; 		18-306
1005×ATP; 6×MG; 1×ADP;
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Structure Assessment
26S proteasome, s3 state
6fvv
 Heteromer
O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33297; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377; 		18-306
1002×ADP; 6×MG; 4×ATP;
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Structure Assessment
26S proteasome, s4 state
6fvw
 Heteromer
O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33297; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377; 		18-306
1004×ATP; 6×MG; 2×ADP;
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Structure Assessment
26S proteasome, s5 state
6fvx
 Heteromer
O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33297; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377; 		18-306
1005×ATP; 6×MG; 1×ADP;
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Structure Assessment
26S proteasome, s6 state
6fvy
 Heteromer
O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33297; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377; 		18-306
1004×ATP; 6×MG; 2×ADP;
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Structure Assessment
26S proteasome Rpt1-RK -Ubp6-UbVS complex in the si state
7qo5
 Heteromer
O13563; O94742; P0CG47; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33297; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P43593; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377; 		18-306
1005×ATP; 6×MG; 1×ADP;
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Structure Assessment
Structure of the 26S proteasome-Ubp6 complex in the si state (Core Particle and Lid)
7qo3
 Heteromer
O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P38624; P38764; P38886; P40016; P40302; P40303; P43588; Q04062; Q06103; Q08723; Q12250; Q12377; 		18-306
100
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Structure Assessment
26S proteasome in presence of AMP-PNP (s3)
5mpb
 Heteromer
O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33297; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377; 		18-306
1005×ANP; 6×MG; 1×ADP;
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Structure Assessment
26S proteasome in presence of BeFx (s4)
5mpc
 Heteromer
O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33297; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P43593; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377; 		18-306
1004×ATP; 6×MG; 2×ADP;
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Structure Assessment
Yeast 26S proteasome non-substrate-engaged (S1 state)
9cgc
 Heteromer
O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33297; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377; 		19-306
1005×MG; 5×ATP; 1×ZN; 1×ADP;
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Structure Assessment
The resting state of yeast proteasome
5wvi
 Heteromer
O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33297; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377; 		23-306
100
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Structure Assessment
Yeast proteasome-ADP-AlFx
5wvk
 Heteromer
O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33297; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377; 		23-306
100
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Structure Assessment
yeast proteasome in substrate-processing state (C3-b)
6j2n
 Heteromer
O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33297; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377; 		23-306
100
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Structure Assessment
Yeast 26S proteasome bound to ubiquitinated substrate (4D motor state)
6ef3
 Heteromer
P07818; P0CH08; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P33297; P33298; P33299; P38624; P40302; P40303; P40327; P43588; P53549; Q01939; 		22-305
100.04×ATP; 2×ADP;
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Structure Assessment
yeast proteasome in Ub-engaged state (C2)
6j30
 Heteromer
O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33297; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377; 		23-306
100
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Structure Assessment
Yeast proteasome in translocation competent state (C3-a)
6j2c
 Heteromer
O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33297; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377; 		23-306
100
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Structure Assessment
Structure of the yeast 26S proteasome lid sub-complex
3jck
 Heteromer
O94742; P32496; P40016; P43588; Q04062; Q06103; Q08723; Q12250; Q12377; 		24-306
100.01×ZN;
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Structure Assessment
Structure of yeast 26S proteasome in M1 state derived from Titan dataset
3jco
 Heteromer
O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33297; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377; 		23-298
100.0
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Structure Assessment
Structure of yeast 26S proteasome in M2 state derived from Titan dataset
3jcp
 Heteromer
O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33297; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377; 		23-298
100.0
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Structure Assessment
Yeast proteasome in Ub-accepted state (C1-b)
6j2q
 Heteromer
O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33297; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377; 		23-298
100.0
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Structure Assessment
Yeast proteasome in resting state (C1-a)
6j2x
 Heteromer
O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33297; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377; 		23-298
100.0
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Structure Assessment
Deep classification of a large cryo-EM dataset defines the conformational landscape of the 26S prot…
4cr2
 Heteromer
O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33297; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377; 		23-298
100.0
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Structure Assessment
Deep classification of a large cryo-EM dataset defines the conformational landscape of the 26S prot…
4cr4
 Heteromer
O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33297; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377; 		23-298
100.0
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Structure Assessment
Deep classification of a large cryo-EM dataset defines the conformational landscape of the 26S prot…
4cr3
 Heteromer
O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33297; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377; 		23-298
100.0
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Structure Assessment
Structure of the 26S proteasome-Ubp6 complex
5a5b
 Heteromer
O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33297; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P43593; P53549; P62987; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377; 		23-298
100.0
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Structure Assessment
Rpn8/Rpn11 dimer complex
5w83
 Heteromer
P43588; Q08723; 		24-222
100.01×ZN;
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Structure Assessment
Crystal structure of rpn11 in a heterodimer complex with rpn8, representing the active portion of t…
4owp
 Heteromer
P43588; Q08723; 		24-221
100.01×ZN;
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Structure Assessment
Zinc-free Rpn11 in complex with Rpn8
4o8y
 Heteromer
P43588; Q08723; 		24-220
100.021×EDO;
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Structure Assessment
Zinc-bound Rpn11 in complex with Rpn8
4o8x
 Heteromer
P43588; Q08723; 		24-220
100.031×EDO; 1×ZN;
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Structure Assessment
Crystal Structure of the Rpn8-Rpn11 MPN domain heterodimer, crystal form Ib
4ocm
 Heteromer
P43588; Q08723; 		23-217
100.01×ZN;
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Structure Assessment
Crystal Structure of the Rpn8-Rpn11 MPN domain heterodimer, crystal form II
4ocn
 Heteromer
P43588; Q08723; 		23-217
100.0
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Structure Assessment
Crystal Structure of the Rpn8-Rpn11 MPN domain heterodimer, crystal form Ia
4ocl
 Heteromer
P43588; Q08723; 		23-217
100.01×ZN;
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Structure Assessment
Protein-protein complex between 26S proteasome regulatory subunit RPN8, RPN11, and Ubiquitin S31
5u4p
 Heteromer
P05759; P43588; Q08723; 		24-217
100.01×ZN;
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Structure Assessment
Formation of an intricate helical bundle dictates the assembly of the 26S proteasome lid
3j47
 Heteromer
P32496; P40016; P43588; Q04062; Q06103; Q08723; Q12250; Q12377; 		230-298
100.0
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Structure Assessment

2 SWISS-MODEL models

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
7qo5.1.3monomer0.6618-306
100.00
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Model report
Structure Assessment
4cr3.1.2monomer0.5823-298
100.00
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Model report
Structure Assessment