I6Y9J2 (LDT2_MYCTU) Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
L,D-transpeptidase 2 UniProtKBInterProSTRINGInteractive Modelling
408 aa; Sequence (Fasta) ;
10 identical sequences: Mycobacterium tuberculosis: O53223; Mycobacterium canetti: A0A8I0ENH2; Mycobacterium tuberculosis: A5U5L6; Mycobacterium bovis: A0A0H3MFR0; Mycobacterium sp. XDR-14: A0AAW8I136; Mycobacterium bovis: A0A1R3Y1G0; Mycobacterium tuberculosis variant pinnipedii: A0AAX1PTQ9; Mycobacterium tuberculosis: A0A045HCF7; Mycobacterium orygis 112400015: A0A829C9E9; Mycobacterium orygis: A0AAU0Q263
It is possible new templates exist for this target since these models were created.
Available Structures
55 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Seq id (%) | Ligands | |
|---|---|---|---|---|---|---|
| Crystal structure of the transpeptidase LdtMt2 from Mycobacterium tuberculosis in complex with diep… | homo-2-mer | 100 | 1×QXU; 4×NO3; 1×GOL; 1×EDO; 2×DMS; | |||
| Crystal Structure of LdtMt2 (56-408) with a panipenem adduct at the active site cysteine-354 | monomer | 100 | 1×E0Y; 1×PEG; 5×GOL; 4×SO4; | |||
| X-RAY CRYSTAL STRUCTURE OF A ENZYMATICALLY DEGRADED BIAPENEM-ADDUCT OF L,D-TRANSPEPTIDASE 2 FROM MY… | monomer | 100 | 1×58U; 5×SO4; 4×PEG; 2×PGE; 3×GOL; 1×EDO; | |||
| Crystal structure of the transpeptidase LdtMt2 from Mycobacterium tuberculosis in complex with alph… | monomer | 100 | 1×KS9; 1×GOL; 2×DMS; 1×EDO; 1×NA; 1×CL; | |||
| Crystal structure of the transpeptidase LdtMt2 from Mycobacterium tuberculosis in complex with male… | monomer | 100 | 1×KUL; 2×EDO; 3×DMS; 1×GOL; 2×NA; 4×CL; | |||
| X-RAY CRYSTAL STRUCTURE OF a TEBIPENEM ADDUCT OF L,D TRANSPEPTIDASE 2 FROM MYCOBACTERIUM TUBERCULOS… | monomer | 100 | 1×58U; 5×SO4; 3×PEG; 4×PGE; 2×GOL; 1×EDO; | |||
| Crystal structure of the transpeptidase LdtMt2 from Mycobacterium tuberculosis in complex with male… | monomer | 100 | 1×DMS; 3×EDO; 1×KSU; | |||
| Crystal structure of LdtMt2 from Mycobacterium tuberculosis | monomer | 100 | 1×NO3; 1×TRS; 11×EDO; 2×NA; | |||
| Crystal structure of the Mycobacterium tuberculosis L,D-transpeptidase-2 (LdtMt2) with peptidoglyca… | monomer | 100 | 1×GOL; 1×GLU; 1×BGC; | |||
| Crystal structure of LdtMt2 from Mycobacterium tuberculosis bound to Ebselen | monomer | 100 | 2×NH4; 1×GOL; 1×9JT; | |||
| Structure and specificity of L-D-Transpeptidase from Mycobacterium tuberculosis and antibiotic resi… | monomer | 100.0 | 1×MLD; | |||
| Crystal structure of the Mycobacterium tuberculosis L,D-transpeptidase-2 (LdtMt2) with new carbapen… | monomer | 100 | 1×59I; 2×GOL; 1×GLU; 1×56X; | |||
| Crystal structure of Mycobacterium tuberculosis L,D-transpeptidase 2 with carbapenem drug T208 | monomer | 100 | 1×T8G; | |||
| Crystal structure of the transpeptidase LdtMt2 from Mycobacterium tuberculosis in complex with acry… | monomer | 100 | 1×DMS; 1×GOL; 1×EDO; 1×KTI; 1×NA; 2×CL; | |||
| Crystal structure of the transpeptidase LdtMt2 from Mycobacterium tuberculosis in complex with natu… | monomer | 100 | 1×EDO; 1×DAL; 1×CL; | |||
| Crystal structure of Mycobacterium tuberculosis L,D-transpeptidase 2 with carbapenem drug T210 | monomer | 100 | 1×NA; 1×6B8; 1×GOL; | |||
| Crystal structure of Mycobacterium tuberculosis L,D-transpeptidase 2 with carbapenem drug T206 in c… | monomer | 100 | 1×6B7; | |||
| Crystal structure of ldtMt2 in complex with Faropenem adduct | monomer | 100 | 1×SO4; 1×BME; 1×DGF; | |||
| Crystal structure of Mycobacterium tuberculosis L,D-transpeptidase 2 with carbapenem drug T206 in c… | monomer | 100 | 1×6B7; | |||
| Crystal structure of the transpeptidase LdtMt2 from Mycobacterium tuberculosis in complex with ebsu… | monomer | 100 | 1×KT6; 1×EDO; | |||
| Crystal structure of ldtMt2 at 1.79 Angstrom resolution | monomer | 100 | ||||
| Crystal structure of Mycobacterium tuberculosis L,D-transpeptidase 2 with carbapenem drug T224 | monomer | 100 | 2×GOL; 1×6QR; | |||
| Crystal structure of the transpeptidase LdtMt2 from Mycobacterium tuberculosis in complex with fuma… | monomer | 100 | 1×KUS; 1×GOL; 2×DMS; 2×NA; | |||
| Crystal structure of the transpeptidase LdtMt2 C354S mutant from Mycobacterium tuberculosis in comp… | monomer | 99.71 | 1×MUB; 1×EPE; 1×CL; | |||
| Crystal structure of Mycobacterium tuberculosis L,D-transpeptidase 2 with Doripenem adduct | monomer | 100 | 1×DRW; 1×SO4; 1×POA; | |||
| X-RAY CRYSTAL STRUCTURE OF L,D TRANSPEPTIDASE 2 FROM MYCOBACTERIUM TUBERCULOSIS | monomer | 99.71 | 6×SO4; 3×GOL; | |||
| Structure and specificity of L-D-Transpeptidase from Mycobacterium tuberculosis and antibiotic resi… | monomer | 100 | 1×MLD; 1×3V5; | |||
| Crystal structure of the transpeptidase LdtMt2 from Mycobacterium tuberculosis in complex with cyan… | monomer | 100 | 1×NO3; 2×DMS; 1×NA; | |||
| Structure and specificity of L-D-Transpeptidase from Mycobacterium tuberculosis and antibiotic resi… | monomer | 100 | 1×MLD; 1×DWZ; | |||
| Crystal structure of Mycobacterium tuberculosis L,D-transpeptidase LdtMt2 N55 truncation mutant (re… | monomer | 100 | ||||
| Structure and specificity of L-D-Transpeptidase from Mycobacterium tuberculosis and antibiotic resi… | monomer | 100.0 | 1×CA; | |||
| Crystal Structure of Mutant (C354A) M. tuberculosis LD-transpeptidase type 2 | monomer | 99.62 | ||||
| Crystal Structure of M. tuberculosis LD-transpeptidase type 2 with Modified Catalytic Cysteine (C35… | monomer | 100.0 | 1×PEG; | |||
| Crystal Structure of M. tuberculosis LD-transpeptidase type 2 with Modified Catalytic Cysteine (C35… | monomer | 100.0 | 1×PEG; | |||
| Crystal Structure of M. tuberculosis LD-transpeptidase type 2 with 2-Mercaptoethanol | monomer | 100.0 | 2×BME; 2×PEG; | |||
| Crystal structure of Mycobacterium tuberculosis L,D-transpeptidase LdtMt2-N140 adduct with meropenem | monomer | 100 | 1×GOL; 1×MXR; | |||
| Structural basis for the inhibition of Mycobacterium tuberculosis L,D-transpeptidase by meropenem, … | monomer | 100 | 1×DWZ; | |||
| A third intermediate state of L,D-transpeptidase LdtMt2-ertapenem adduct | monomer | 100 | 1×2RG; 3×GOL; | |||
| Crystal sturucture of L,D-transpeptidase LdtMt2 from Mycobacterium tuberculosis in complex with Imi… | monomer | 100 | 1×IM2; 5×GOL; | |||
| Crystal sturucture of L,D-transpeptidase LdtMt2 from Mycobacterium tuberculosis in complex with ert… | monomer | 100 | 1×2RG; 5×GOL; 2×PEG; 1×SO4; | |||
| Structural basis for the inhibition of Mycobacterium tuberculosis L,D-transpeptidase by meropenem, … | monomer | 100 | 1×EMT; 2×GOL; | |||
| Crystal structure of Mycobacterium tuberculosis L,D-transpeptidase LdtMt2 N140 truncation mutant (r… | monomer | 100 | ||||
| Crystal structure of LdtMt2, a L,D-transpeptidase from Mycobacterium tuberculosis: domain B and C | monomer | 100 | 8×ACT; 1×NA; | |||
| LppS with covalent adduct derived from 1b | monomer | 100 | 1×BT6; 1×TAM; | |||
| Crystal structure of the Mycobacterium tuberculosis L,D-transpeptidase-2 (LdtMt2) BC-module with fa… | monomer | 100 | ||||
| LppS with covalent adduct derived from 1E | monomer | 100 | 1×XL3; 2×ACT; | |||
| LppS with covalent adduct derived from 1c | monomer | 100 | 1×SDQ; 2×ACT; | |||
| LdtMT2 with covalent adduct derived from N-Thio-beta-lactam 1a | monomer | 100.0 | 2×DMS; | |||
| the structure of L,D-transpeptidase LdtMt2 complex with citrate | monomer | 100 | 1×CIT; | |||
| Structural basis for the inhibition of Mycobacterium tuberculosis L,D-transpeptidase by meropenem, … | monomer | 100.0 | 1×CA; 1×GOL; | |||
| LppS with covalent adduct derived from 1g | monomer | 100 | 1×QU5; | |||
| Crystal structure of the Mycobacterium tuberculosis L,D-transpeptidase-2 (LdtMt2) BC-module with th… | monomer | 100 | 1×MNB; | |||
| Crystal Structure of M. tuberculosis LD-transpeptidase type 2 complexed with a peptidoglycan fragme… | monomer | 100 | 4×0JC; 1×DGL; 1×6CL; | |||
| Crystallographic structure of L,D-transpeptidase 2 from Mycobacterium tuberculosis | monomer | 100 | 4×0JC; 1×DGL; | |||
| Crystal structure of LdtMt2, a L,D-transpeptidase from Mycobacterium tuberculosis: domain A and B | monomer | 100 | 2×SO4; | |||
1 SWISS-MODEL model
| Template | Oligo-state | QMEAN | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 5k69.1.A | monomer | 0.92 | 1×6QR; | 100.00 | ||