SMTL ID : 4gsr.1

Structural basis for the inhibition of Mycobacterium tuberculosis L,D-transpeptidase by meropenem, a drug effective against extensively drug-resistant strains

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.79 Å

Oligo State

monomer

Ligands

1 x EMT: 2-(ETHYLMERCURI-THIO)-BENZOIC ACID(Non-covalent)

EMT.1: 4 residues within 4Å: Chain A: H.85, F.86, E.123, I.125 7 PLIP interactions: 4 interactions with chain A, 1 Ligand-Ligand interactions, 2 Ligand-Water interactions Hydrophobic interactions: A:F.86, A:I.125 Hydrogen bonds: A:F.86 Salt bridges: A:H.85 Metal complexes: EMT.1, H2O.3, H2O.8

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 3 residues within 4Å: Chain A: N.48, N.75, N.76 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.48, A:N.76 GOL.3: 7 residues within 4Å: Chain A: L.74, N.75, E.78, Y.201, I.259, D.260, G.261 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:L.74, A:N.75, A:E.78, A:D.260 Water bridges: A:E.78, A:R.80

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, H.S. et al., Structural basis for the inhibition of Mycobacterium tuberculosis L,D-transpeptidase by meropenem, a drug effective against extensively drug-resistant strains. Acta Crystallogr.,Sect.D (2013)

Release Date

2013-02-27

Peptides

Probable conserved lipoprotein LPPS: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Probable conserved lipoprotein LPPS

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