N1P2W5 | SWISS-MODEL Repository

N1P2W5 (N1P2W5_YEASC) Saccharomyces cerevisiae (strain CENPK113-7D) (Baker's yeast)

Snu114p UniProtKB InterPro Interactive Modelling

1008 aa; Sequence (Fasta) ; 2 identical sequences: Saccharomyces cerevisiae: G2WHL9, P36048

It is possible new templates exist for this target since these models were created.

Available Structures

24 Experimental Structures

Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
Cryo-EM structure of the yeast B*-a2 complex at an average resolution of 3.2 angstrom	6j6g PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P21374; P25337; P28004; P32523; P33334; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q03375; Q03654; Q03772; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417;	67-1008	100.0	1×IHP; 1×GTP; 6×MG; 6×ZN;
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Cryo-EM structure of the yeast B*-a1 complex at an average resolution of 3.6 angstrom	6j6h PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P21374; P25337; P28004; P32523; P33334; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q03375; Q03654; Q03772; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417;	67-1008	100.0	1×IHP; 1×GTP; 6×MG; 6×ZN;
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Cryo-EM structure of the yeast B*-b1 complex at an average resolution of 3.86 angstrom	6j6n PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P21374; P25337; P28004; P32523; P33334; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q03375; Q03654; Q03772; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417;	67-1008	100.0	1×IHP; 1×GTP; 6×MG; 6×ZN;
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Cryo-EM structure of the intron-lariat spliceosome ready for disassembly from S.cerevisiae at 3.5 a…	5y88 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P25337; P28004; P28320; P32523; P33334; P36048; P36118; P38241; P40018; P40204; P40567; P40968; P43321; P52868; P53131; P53277; P54999; Q02260; Q03654; Q03772; Q04048; Q06091; Q06217; Q06411; Q08963; Q12046; Q12309; Q12330; Q12417;	67-1008	100.0	1×IHP; 1×GTP; 6×MG; 6×ZN;
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Cryo-EM structure of the yeast B*-b2 complex at an average resolution of 3.7 angstrom	6j6q PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P21374; P25337; P28004; P28320; P32523; P33334; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q03375; Q03654; Q03772; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417;	67-1008	100.0	1×IHP; 1×GTP; 6×MG; 7×ZN;
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Structure of the yeast post-catalytic P complex spliceosome at 2.3 Angstrom resolution	9dtr PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P21374; P24384; P25337; P28004; P32523; P33334; P33411; P36048; P38241; P38302; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P53913; P54999; Q02260; Q02775; Q03375; Q03654; Q03772; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417;	69-1008	100.0	2×MG; 4×K; 2×IHP; 1×GTP; 7×ZN;
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S. cerevisiae spliceosomal post-catalytic P complex	6bk8 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P24384; P25337; P28004; P32523; P33334; P33411; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q02775; Q03375; Q03654; Q03772; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417;	69-1008	100.0	5×MG; 1×IHP; 1×GTP; 7×ZN;
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Post-catalytic P complex spliceosome with 3' splice site docked	6exn PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P24384; P25337; P28004; P28320; P32523; P33334; P33411; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q02775; Q03375; Q03654; Q03772; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417;	69-1005	100.0	1×MG; 1×IHP; 1×GTP; 7×ZN;
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Structure of the core of the yeast spliceosome immediately after branching	5lj3 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P21374; P25337; P28004; P28320; P33334; P36048; P38241; P40018; P40204; P40567; P43321; P53854; P54999; Q02260; Q03375; Q03654; Q03772; Q04048; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417;	71-998	100.0	2×MG; 7×ZN; 1×GTP;
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Overall structure of the yeast spliceosome immediately after branching.	5lj5 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P15938; P21374; P25337; P28004; P28320; P32523; P32639; P33334; P36048; P38241; P40018; P40204; P40567; P43321; P53854; P54999; Q02260; Q03375; Q03654; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417;	71-998	100.0	2×MG; 7×ZN; 1×GTP;
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Structure of a spliceosome remodeled for exon ligation	5mq0 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P24384; P25337; P28004; P32523; P33334; P33411; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q02775; Q03375; Q03654; Q03772; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417;	73-997	100.0	3×MG; 2×K; 1×IHP; 1×GTP; 6×ZN;
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Structure of a spliceosome remodeled for exon ligation	5mps PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P25337; P28004; P33334; P33411; P36048; P38241; P40018; P40204; P40968; P43321; P53277; P53333; P54999; Q02260; Q02775; Q03375; Q03654; Q03772; Q04048; Q06217; Q12046; Q12309; Q12330; Q12417;	73-997	100.0	3×MG; 2×K; 1×IHP; 1×GTP; 6×ZN;
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Cryo-EM structure of the Catalytic Step I spliceosome (C complex) at 3.4 angstrom resolution	5gmk PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P21374; P25337; P28004; P28320; P32523; P33334; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P53854; P54999; Q02260; Q03375; Q03654; Q03772; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417;	67-975	100.0	1×GTP; 6×MG; 7×ZN;
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Cryo-EM structure of the activated spliceosome (Bact complex) at 3.5 angstrom resolution	5gm6 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P0C074; P20095; P25337; P28004; P32523; P32639; P33334; P36048; P38241; P40018; P40204; P40565; P40968; P43321; P46947; P49955; P53277; P53333; P53769; P54999; Q02260; Q02554; Q02770; Q03375; Q03654; Q03772; Q04048; Q04693; Q06091; Q06217; Q06835; Q07350; Q07930; Q12046; Q12309; Q12330; Q12417; Q99181;	67-975	100.0	1×GTP; 5×MG; 13×ZN; 1×ADP;
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Cryo-EM Structure of the Post-catalytic Spliceosome from Saccharomyces cerevisiae at 3.6 angstrom	5ylz PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P24384; P25337; P28004; P32523; P33334; P33411; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q02775; Q03375; Q03654; Q03772; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417;	67-975	100.0	1×IHP; 1×GTP; 6×MG; 6×ZN;
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Cryo-EM structure of the Catalytic Step II spliceosome (C* complex) at 4.0 angstrom resolution	5wsg PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P15938; P25337; P28004; P32523; P33334; P33411; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q03375; Q03654; Q03772; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417;	67-975	100.0	1×GTP; 6×MG; 6×ZN;
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Structure of a pre-catalytic spliceosome	5nrl PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A6ZYX7; P0C074; P19735; P19736; P20053; P32524; P32639; P33334; P36048; P38203; P38282; P39990; P40018; P40070; P40089; P40204; P40567; P43321; P47093; P49704; P49955; P53905; P54999; P57743; Q00723; Q02260; Q02554; Q03338; Q04693; Q06217; Q06819; Q06835; Q07350; Q08963; Q12330; Q12368; Q12420; Q99181;	105-1005	100.0	1×GTP; 7×ZN;
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Crystal structure of a yeast Snu114-Prp8 complex	6teo PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P33334; P36048;	106-1004	100.0	1×SO4; 1×GTP; 1×MG;
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Foot region of the yeast spliceosomal U4/U6.U5 tri-snRNP	5gam PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P33334; P36048; P40018; P40204; P43321; P54999; Q02260; Q06217; Q12330;	102-998	99.65	1×GTP;
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The overall structure of the yeast spliceosomal U4/U6.U5 tri-snRNP at 3.7 Angstrom	5gan PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P19735; P20053; P32639; P33334; P36048; P38203; P39990; P40018; P40070; P40089; P40204; P43321; P47093; P49704; P53905; P54999; P57743; Q02260; Q03338; Q06217; Q06406; Q06819; Q12330; Q12420;	102-998	99.65	1×GTP;
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yeast activated spliceosome	5lqw PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P0C074; P20095; P25337; P28004; P32639; P33334; P36048; P38241; P40018; P40204; P40565; P43321; P46947; P49955; P53333; P54999; Q02260; Q03654; Q04048; Q04693; Q06217; Q06835; Q07930; Q12046; Q12309; Q12330; Q12417;	111-998	100.0
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Cryo-EM structure of the spliceosomal U4/U6.U5 tri-snRNP	3jcm PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P19735; P20053; P32639; P33334; P36048; P38203; P39990; P40018; P40070; P40089; P40204; P43321; P47093; P49704; P53905; P54999; P57743; Q02260; Q03338; Q06217; Q06406; Q06819; Q12330;	102-975	100.0	1×GTP; 1×M7M;
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Cryo-EM structure of the yeast pre-B complex at an average resolution of 3.4~4.6 angstrom (tri-snRN…	5zwm PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P0C074; P19735; P19736; P20053; P32524; P32639; P33334; P36048; P38203; P39990; P40018; P40070; P40089; P40204; P40565; P40567; P43321; P46947; P47093; P49704; P49955; P53905; P54999; P57743; Q02260; Q02554; Q03338; Q04693; Q06217; Q06406; Q06819; Q06835; Q07350; Q07930; Q08963; Q12330; Q12420; Q99181;	102-975	100.0	1×GTP; 1×MG; 6×ZN;
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Cryo-EM structure of the yeast B complex at average resolution of 3.9 angstrom	5zwo PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P0C074; P19735; P19736; P20053; P32524; P32639; P33334; P36048; P38203; P38282; P39990; P40018; P40070; P40089; P40204; P40565; P40567; P43321; P46947; P47093; P49704; P49955; P53905; P54999; P57743; Q00723; Q02260; Q02554; Q03338; Q04693; Q06217; Q06406; Q06819; Q06835; Q07350; Q07930; Q08963; Q12330; Q12368; Q12420; Q99181;	102-975	100.0	1×GTP; 1×MG;
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8 SWISS-MODEL models

Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
7b9v.1.F	monomer	0.84	63-1005	1×MG; 1×GTP;	100.00
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6j6g.1.B	monomer	0.82	67-1008	1×MG;	100.00
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1u2r.1.A	monomer	0.62	118-995		27.57
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3b78.1.A	monomer	0.62	118-995		27.57
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5jus.78.A	monomer	0.60	118-995		27.57
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1u2r.1.A	monomer	0.58	118-976		31.27
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3b78.1.A	monomer	0.58	118-976		31.27
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6gqv.77.A	monomer	0.51	118-976		31.27
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

N1P2W5 (N1P2W5_YEASC) Saccharomyces cerevisiae (strain CENPK113-7D) (Baker's yeast)

Snu114p UniProtKBInterProInteractive Modelling

Available Structures

24 Experimental Structures

8 SWISS-MODEL models

Alignments

Background

Resolution

Snu114p UniProtKB InterPro Interactive Modelling