O00408 (PDE2A_HUMAN) Homo sapiens (Human)

cGMP-dependent 3',5'-cyclic phosphodiesterase UniProtKBInterProSTRINGInteractive Modelling

941 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4; Isoform 5; Isoform 6); 3 identical sequences: Pan troglodytes: H2R546, A0A6D2W1U4; Pan paniscus: A0A2R9BH84

Available Structures

42 Experimental Structures

DescriptionPDB IDOligo-stateRangeSeq id (%)Ligands
Crystal structure of of PDE2-inhibitor complexhomo-4-mer579-916
100ZN;MG;1L6;
X-ray structure of PDE2Ahomo-2-mer223-900
100.0ZN;MG;
Crystal structure of human phosphodiesterase 2A in complex with 6-methyl-N-(1-(4-(trifluoromethoxy)…homo-2-mer579-918
100MG;ZN;87R;
[1,2,4]Triazolo[1,5-a]pyrimidine Phosphodiesterase 2 Inhibitorshomo-2-mer579-917
100ZN;MG;QOQ;
Discovery of Clinical Candidate N-{(1S)-1-[3-Fluoro-4-(trifluoromethoxy)phenyl]-2-methoxyethyl}-7-m…homo-2-mer579-916
100ZN;MG;9GA;
Crystal structure of PDE2 catalytic domain in complex with BAY60-7550homo-2-mer579-916
100ZN;MG;19F;
Crystal structure of PDE2 catalytic domain in space group P1homo-2-mer579-916
100ZN;MG;
PDE2 in complex with compound 5homo-2-mer581-916
100ZN;MG;FKJ; 11×EDO;
PDE2 in complex with compound 7homo-2-mer581-916
100ZN;MG;EDO;FKV;
PDE2 in complex with compound 7homo-2-mer581-916
100ZN;MG;FKG;EDO;
Discovery of Clinical Candidate N-{(1S)-1-[3-Fluoro-4-(trifluoromethoxy)phenyl]-2-methoxyethyl}-7-m…homo-2-mer583-916
100ZN;MG;9GJ;
PDE2 in complex with molecule 5monomer580-919
100MG;ZN;C6Z;GOL;SO4;NA;
The Crystal Structure of the Phosphodiesterase 2A Catalytic Domainmonomer576-915
99.41ZN;MG;PO4;
Crystal Structure of human PDE2a in complex with (5S)-1-[(3-bromo-4-fluorophenyl)carbonyl]-3,3-difl…monomer579-918
1007OJ;ZN;MG;
PDE2a catalytic domain in complex with a brain penetrant inhibitormonomer579-918
100788;ZN;MG;
Crystal structure of human phosphodiesterase 2A with 1-(2-chlorophenyl)-N,4-dimethyl-[1,2,4]triazol…monomer579-917
100EOG;ZN;MG;
CRYSTAL STRUCTURE OF HUMAN PHOSPHODIESTERASE 2A IN COMPLEX WITH 1-[(3,4-difluorophenyl)carbonyl]-3,…monomer579-917
1007P4;ZN;MG;
CRYSTAL STRUCTURE OF HUMAN PHOSPHODIESTERASE 2A IN COMPLEX WITH 1-[(3-bromo-4-fluorophenyl)carbonyl…monomer579-917
1007OJ;ZN;MG;
Crystal structure of human phosphodiesterase 2A with 1-(2-chloro-5-methoxy-phenyl)-N-isobutyl-4-met…monomer579-917
100EP7;ZN;MG;
Crystal structure of human phosphodiesterase 2A with N-(1-adamantyl)-1-(2-chlorophenyl)-4-methyl-[1…monomer579-917
100EOJ;ZN;MG;
Crystal structure of human phosphodiesterase 2A with 1-(2-chloro-5-isobutoxy-phenyl)-N,4-dimethyl-[…monomer579-917
100EOS;ZN;MG;
Crystal structure of human phosphodiesterase 2A with 1-(5-tert-butoxy-2-chloro-phenyl)-N-isobutyl-4…monomer579-917
100EPV;ZN;MG;
PDE2a catalytic domain in complex with a brain penetrant inhibitormonomer579-917
100ZN;Q2T;MG;
CRYSTAL STRUCTURE OF HUMAN PHOSPHODIESTERASE 2A IN COMPLEX WITH 1-[(3-chloro-4-fluorophenyl)carbony…monomer579-917
1007OY;ZN;MG;
PDE2 catalytic domain complexed with inhibitorsmonomer579-917
1007Y4;ZN;MG;
CRYSTAL STRUCTURE OF HUMAN PHOSPHODIESTERASE 2A IN COMPLEX WITH 3,3-difluoro-1-[(4-fluoro-3-iodophe…monomer579-916
1007OV;ZN;MG;
hPDE2A catalytic domain complexed with IBMXmonomer579-916
100ZN;MG;IBM;
CRYSTAL STRUCTURE OF HUMAN PHOSPHODIESTERASE 2A IN COMPLEX WITH 3,3-difluoro-1-[(4-fluorophenyl)car…monomer579-916
1007OP;ZN;MG;
Crystal structure of human phosphodiesterase 2A with N-(1-adamantyl)-1-(2-chloro-5-isobutoxy-phenyl…monomer579-916
100EOY;ZN;MG;
CRYSTAL STRUCTURE OF HUMAN PHOSPHODIESTERASE 2A WITH 3-{5-methyl-[1,2,4]triazolo[1,5-a]pyrimidin-7-…monomer579-916
1007OG;ZN;MG;
CRYSTAL STRUCTURE OF HUMAN PHOSPHODIESTERASE 2A IN COMPLEX with [1,2,4]triazolo[1,5-a]pyrimidin-7-y…monomer579-916
1007OM;ZN;MG;
PDE2 catalytic domain complexed with inhibitorsmonomer579-916
10019F;ZN;MG;
PDE2 catalytic domain complexed with inhibitorsmonomer579-916
1007XV;ZN;MG;
PDE2 catalytic domain complexed with inhibitorsmonomer579-916
1007XS;ZN;MG;
PDE2 catalytic domain complexed with inhibitorsmonomer579-916
100ZN;MG;7Y1;
PDE2 complexed with 2-[6-fluoro-8-methylsulfonyl-9-[(1R)-1-[4-(trifluoromethyl)phenyl]ethyl]-1,2,3,…monomer579-916
100DY1;ZN;MG;
Crystal structure of PDE2 in complex with complex 9monomer582-916
100ZN;MG;CZY;EDO;
Crystal Structure of PDE2 in complex with compound 16monomer582-916
100ZN;MG;CZV;EDO;
PDE2 in complex with compound 1monomer582-916
100ZN;MG;D07;
[1,2,4]Triazolo[1,5-a]pyrimidine Phosphodiesterase 2 Inhibitorsmonomer591-916
100.0ZN;MG;QMZ;
Selective Inhibitors of PDE2, PDE9, and PDE10: Modulators of Activity of the Central Nervous Systemmonomer581-905
100EH9;ZN;MG;
Catalytic domain of hPDE2Amonomer588-901
100.0ZN;

3 SWISS-MODEL models

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
3ibj.1.Ahomo-2-mer0.80223-900
ZN;MG;100.00
1mc0.1.Amonomer0.76223-562
PCG;94.99
3ibj.1.Ahomo-2-mer0.5649-398
19.18

15 SWISS-MODEL models built on isoform sequence

IsoformTemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
Isoform 23ibj.1.Ahomo-2-mer0.80202-879
ZN;MG;100.00
Isoform 21mc0.1.Amonomer0.76202-541
PCG;94.99
Isoform 21mc0.1.Amonomer0.5626-368
18.97
Isoform 23ibj.1.Ahomo-2-mer0.5619-377
18.96
Isoform 33ibj.1.Ahomo-2-mer0.80216-893
ZN;MG;100.00
Isoform 31mc0.1.Amonomer0.77216-555
PCG;94.99
Isoform 33ibj.1.Ahomo-2-mer0.5742-391
18.55
Isoform 43ibj.1.Ahomo-2-mer0.80214-891
ZN;MG;100.00
Isoform 41mc0.1.Amonomer0.78214-553
PCG;94.99
Isoform 43ibj.1.Ahomo-2-mer0.5639-389
19.12
Isoform 53ibj.1.Ahomo-2-mer0.7739-644
ZN;MG;90.71
Isoform 61mc0.1.Amonomer0.78202-541
PCG;94.99
Isoform 63ibj.1.Ahomo-2-mer0.75202-759
96.90
Isoform 63ibj.1.Ahomo-2-mer0.5719-378
19.51
Isoform 61mc0.1.Amonomer0.5526-368
19.61