O15164 (TIF1A_HUMAN) Homo sapiens (Human)

Transcription intermediary factor 1-alpha UniProtInterproStringInteractive Modelling

1050 aa; Sequence (Fasta) ; (Isoform 2; ) Identical sequences: Pan troglodytes: H2QVG2

Sequence Features

 827Interaction with histone H3 that is not methylated at 'Lys-4' (H3K4me0).
 320I -> T (in an ovarian serous carcinoma sample; somatic mutation). VAR_042382
 403T -> N (in a lung squamous cell carcinoma sample; somatic mutation). VAR_042383
 762S -> N. VAR_042384
 796N -> S (in dbSNP:rs35356723). VAR_052148 dbSNP
 1009R -> S (in dbSNP:rs34585297). VAR_042385 dbSNP
 56-82RING-type.
 158-211B box-type 1.
 218-259B box-type 2.
 826-873PHD-type.
 476-477Breakpoint for translocation to form TRIM24-RET oncogene.
 220-257B-box-type zinc finger
IPR000315PF00643
 829-871Zinc finger, PHD-finger
IPR019787PF00628
 908-989Bromodomain
IPR001487PF00439

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRangeDownload
Crystal structure of TRIM24 PHD-Bromo complexed with H4(14-19)K16ac peptide Heteromer
P62805;
ZN;3o36824-1006
Crystal structure of TRIM24 PHD-Bromo complexed with H3(23-31)K27ac peptide Heteromer
P68431;
ZN;3o35824-1006
Crystal structure of TRIM24 PHD-Bromo complexed with H3(13-32)K23ac peptide Heteromer
P68431;
ZN;BTN;3o34824-1006
Crystal structure of TRIM24 PHD-Bromo complexed with H3(1-10)K4 peptide Heteromer
P68431;
ZN;3o37824-1006
Crystal sturcture of human bromodomain proteinhomo-2-mer 2yyn891-1012
Crystal structure of TRIM24 PHD-bromodomain complexed with N-{6-[3-(benzyloxy)phenoxy]-1,3-dimeth...monomer GOL;ZN;4ybm824-1006
Crystal structure of TRIM24 PHD-bromodomain complexed with 2,4-dimethoxy-N-(1-methyl-2-oxo-1,2,3,...monomer GOL;ZN;4A7;CL;4yad824-1006
Crystal structure of TRIM24 PHD-bromodomain complexed with N-(6-{3-[4-(dimethylamino)butoxy]-5-pr...monomer GOL;ZN;4C1;4yc9824-1006
Crystal structure of TRIM24 PHD-bromodomain complexed with N-{1,3-dimethyl-2-oxo-6-[3-(oxolan-3-y...monomer ZN;DMS;4BV;4ybt824-1006
Crystal structure of TRIM24 PHD-bromodomain complexed with N-{1,3-dimethyl-6-[3-(2-methylpropoxy)...monomer ZN;DMS;4BK;4ybs824-1006
'Crystal structure of TRIM24 PHD-bromodomain complexed with 1-methyl-5-(2-methyl-1 3-thiazol-4-yl...monomer 4CN;ZN;SO4;4yab824-1006
Crystal structure of TRIM24 PHD-Bromo in the free statemonomer ZN;3o33824-1006
Crystal structure of TRIM24 PHD-bromodomain complexed with N-(1,3-dimethyl-2-oxo-2,3-dihydro-1H-1...monomer ZN;4A8;4yat824-1006
Crystal structure of TRIM24 PHD-bromodomain complexed with N-[6-(4-methoxyphenoxy)-1,3-dimethyl-2...monomer 4AE;ZN;GOL;4yax824-1006
Crystal structure of TRIM24 with 3,4-dimethoxy-N-(6-(4-methoxyphenoxy)-1,3-dimethyl-2-oxo-2,3-dih...monomer ZN;DMS;SO4;4zql825-1006

Homology models

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownload
monomer -2.925ghe.1.A259-392
17.60
monomer -3.094tn3.1.B218-395
19.32
monomer -4.935eiu.1.A221-388
21.37

Homology models built on isoform sequence

Isoform #Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownload
2monomerZN;4C1;-1.244yc9.1.A790-972
100.00
2monomer-1.444yh3.1.A866-973
35.85
2monomer-2.985ghe.1.A259-392
17.60
2monomer-3.094tn3.1.B218-395
19.32