O41353 | SWISS-MODEL Repository

O41353 (RDRP_THOGV) Thogoto virus (isolate SiAr 126) (Tho)

RNA-directed RNA polymerase catalytic subunit UniProtKB InterPro Interactive Modelling

It is possible new templates exist for this target since these models were created.

Available Structures

13 Experimental Structures

Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
Thogoto virus polymerase in Mode A conformation and bound to 35-mer loop promoter RNA	8p0g PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P27194; Q9YNA4;	1-710	99.85	1×MG;
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Cryo-EM structure of Thogoto virus polymerase in a transcription elongation-reception conformation	8z9h PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P27194; Q9YNA4;	1-710	99.7	2×V9G;
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Cryo-EM structure of Thogoto virus polymerase in transcription pre-initiation conformation 2	8z8j PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P27194; Q9YNA4;	1-710	99.69
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Cryo-EM structure of Thogoto virus polymerase in transcription pre-initiation conformation 3	8z8n PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P27194; Q9YNA4;	1-710	99.69
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Cryo-EM structure of Thogoto virus polymerase in a replication reception conformation	8z9q PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P27194; Q9YNA4;	1-710	99.69
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Cryo-EM structure of Thogoto virus polymerase in a replication elongation-reception conformation	8z9r PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P27194; Q9YNA4;	1-710	99.7
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Cryo-EM structure of Thogoto virus polymerase in a transcription initiation conformation	8z8x PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P27194; Q9YNA4;	1-710	99.72	1×G2P;
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Cryo-EM structure of Thogoto virus polymerase in transcription initiation conformation 2	8z90 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P27194; Q9YNA4;	1-710	99.72	1×G2P;
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Cryo-EM structure of Thogoto virus polymerase in a transcription elongation conformation	8z97 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P27194; Q9YNA4;	1-710	99.7	1×V9G;
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Cryo-EM structure of Thogoto virus polymerase in a transcription reception conformation	8z98 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P27194; Q9YNA4;	1-710	99.69	1×V9G;
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Thogoto virus polymerase in Mode B conformation with defined endonuclease domain and bound to 32-me…	8p0u PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P27194; Q9YNA4;	1-636	99.83	1×MG;
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Cryo-EM structure of Thogoto virus polymerase in transcription pre-initiation conformation 1	8z85 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P27194; Q9YNA4;	1-636	99.66
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Thogoto virus polymerase in Mode B conformation and bound to 32-mer loop promoter RNA	8p0b PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P27194; Q9YNA4;	1-636	99.83
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3 SWISS-MODEL models

Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
8z8x.1.B	monomer	0.85	1-710		99.72
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6tu5.1.B	monomer	0.58	8-706	1×MG;	26.73
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8rnc.1.G	monomer	0.58	9-708		26.65
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

O41353 (RDRP_THOGV) Thogoto virus (isolate SiAr 126) (Tho)

RNA-directed RNA polymerase catalytic subunit UniProtKBInterProInteractive Modelling

Available Structures

13 Experimental Structures

3 SWISS-MODEL models

Alignments

Background

Resolution

RNA-directed RNA polymerase catalytic subunit UniProtKB InterPro Interactive Modelling