O94874 | SWISS-MODEL Repository

O94874 (UFL1_HUMAN) Homo sapiens (Human)

E3 UFM1-protein ligase 1 UniProtKB InterPro STRING Interactive Modelling

794 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3)

Available Structures

8 Experimental Structures

Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (native)	8ohd PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P18077; P18124; P18621; P26373; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P61960; P62424; P62750; P62829; P62888; P62891; P62899; P62906; P62910; P62913; P62917; P62987; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q96HY6; Q96JB5; Q96L21; Q9Y3U8;	29-785	100.0	220×MG; 5×ZN;
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60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (in-vitro reconstitution)	8oj5 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P18077; P18124; P18621; P26373; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P61254; P61313; P61353; P61513; P61927; P61960; P62424; P62750; P62829; P62888; P62891; P62899; P62906; P62910; P62913; P62917; P62987; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q96HY6; Q96JB5; Q96L21; Q9Y3U8;	29-785	100.0	220×MG; 5×ZN;
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60S ribosomal subunit bound to the E3-UFM1 complex - state 2 (native)	8oj0 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P18077; P18124; P18621; P26373; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P60059; P60468; P61254; P61313; P61353; P61513; P61619; P61927; P61960; P62424; P62750; P62829; P62888; P62891; P62899; P62906; P62910; P62913; P62917; P62987; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q96HY6; Q96JB5; Q96L21; Q9Y3U8;	29-785	100.0	220×MG; 5×ZN;
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60S ribosomal subunit in complex with E3-UFM1 ligase and RQC machinery components NEMF and LTN1 (Co…	9gy4 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O60524; O94822; P05388; P18077; P18124; P18621; P26373; P30050; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P61254; P61313; P61353; P61513; P61927; P61960; P62424; P62750; P62829; P62888; P62891; P62899; P62906; P62910; P62913; P62917; P62987; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q96HY6; Q96JB5; Q96L21; Q9Y3U8;	29-785	100.0	219×MG; 5×ZN;
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60S ribosomal subunit bound to the E3-UFM1 complex - state 1 (native)	8oj8 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P18077; P18124; P18621; P26373; P32969; P35268; P36578; P38377; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P60059; P60468; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62906; P62910; P62913; P62917; P62987; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q96L21; Q9Y3U8;	247-785	100.0	220×MG; 5×ZN;
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UFL1/DDRGK1 bound to UFC1	8c0d PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer Q96HY6; Q9Y3C8;	1-162	100.0
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UFL1 E3 ligase bound 60S ribosome	8qfd PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P18077; P18124; P18621; P26373; P27635; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P62987; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q9Y3U8;	436-448	100	161×MG; 5×ZN;
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Chimeric protein of human UFM1 E3 ligase, UFL1, and DDRGK1	8b9x PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	27-182	100	1×CL;
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9 SWISS-MODEL models

Template	Oligo-state	QMEANDisCo	Range	Trg-Tpl Seq id (%)
8ohd.1.D	monomer	0.81	29-785	100.00
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9gy4.1.G	monomer	0.77	29-785	100.00
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2ply.2.B	monomer	0.56	116-279	13.92
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1lva.1.A	monomer	0.56	26-229	14.80
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1lva.1.A	monomer	0.56	74-279	12.31
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8b9x.1.A	monomer	0.54	62-305	13.39
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8iuh.1.S	monomer	0.54	59-231	12.79
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8iuh.1.S	monomer	0.54	27-136	16.36
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2ply.1.B	monomer	0.52	45-229	14.80
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

10 SWISS-MODEL models built on isoform sequence

Isoform	Template	Oligo-state	QMEANDisCo	Range	Trg-Tpl Seq id (%)
Isoform 2	8ohd.1.D	monomer	0.81	1-720	100.00
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Isoform 2	9gy4.1.G	monomer	0.78	1-720	100.00
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Isoform 2	2ply.2.B	monomer	0.57	51-214	13.40
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Isoform 2	1lva.1.A	monomer	0.57	8-214	12.24
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Isoform 2	2ply.2.B	monomer	0.55	11-163	15.86
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Isoform 2	8b9x.1.A	monomer	0.55	57-303	17.62
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Isoform 2	8b9x.1.A	monomer	0.55	9-240	13.60
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Isoform 3	8ohd.1.D	monomer	0.82	29-509	99.61
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Isoform 3	8iuh.1.S	monomer	0.54	27-136	16.36
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Isoform 3	8iuh.1.S	monomer	0.53	59-231	12.79
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O94874 (UFL1_HUMAN) Homo sapiens (Human)

E3 UFM1-protein ligase 1 UniProtKBInterProSTRINGInteractive Modelling

Available Structures

8 Experimental Structures

9 SWISS-MODEL models

10 SWISS-MODEL models built on isoform sequence

Alignments

Background

Resolution

E3 UFM1-protein ligase 1 UniProtKB InterPro STRING Interactive Modelling