O95926 | SWISS-MODEL Repository

O95926 (SYF2_HUMAN) Homo sapiens (Human)

Pre-mRNA-splicing factor SYF2 UniProtKB InterPro STRING Interactive Modelling

It is possible new templates exist for this target since these models were created.

However, an attempt to improve models for this target was made on 2024-11-15. The outcome - only low quality models could be built.

Available Structures

15 Experimental Structures

Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
Integrative Structure of the human intron lariat Spliceosome (ILS'')	8ro2 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43143; O43660; O60306; O60508; O75934; P14678; P41223; P62304; P62306; P62308; P62314; P62316; P62318; Q13573; Q15029; Q2TBE0; Q69YN2; Q6IQ49; Q6P2Q9; Q8WUD4; Q96DF8; Q96DI7; Q99459; Q9BZJ0; Q9HCS7; Q9NW64; Q9P013; Q9UBB9; Q9ULR0; Q9UMS4; Q9Y3C6; Q9Y5B6;	20-195	100.0	1×GTP; 3×ZN; 1×IHP;
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Human post-catalytic P complex spliceosome	6qdv PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43660; O60306; O60508; O75643; O75934; O95391; P08579; P09661; P14678; P38919; P41223; P62304; P62306; P62308; P62314; P62316; P62318; Q13573; Q14562; Q15029; Q6IQ49; Q6P2Q9; Q8N5F7; Q8WUQ7; Q96A72; Q96DI7; Q99459; Q9BZJ0; Q9H875; Q9HCG8; Q9HCS7; Q9NW64; Q9P013; Q9UMS4; Q9UQ35; Q9Y3C6; Q9Y421; Q9Y5S9;	100-243	100	7×MG; 1×K; 1×ATP; 1×GTP; 7×ZN; 1×IHP;
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The cryo-EM structure of human pre-C*-II complex	7w5a PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15234; O43660; O60306; O60508; O75934; O95391; P08579; P09661; P14678; P38919; P41223; P61326; P62304; P62306; P62308; P62314; P62316; P62318; Q13573; Q14562; Q15029; Q6P2Q9; Q8WUQ7; Q96DI7; Q99459; Q9BZJ0; Q9GZU8; Q9H875; Q9HCG8; Q9HCS7; Q9NW64; Q9P013; Q9UMS4; Q9UNP9; Q9UQ35; Q9Y3C6; Q9Y421; Q9Y5S9;	114-243	100	1×IHP; 1×GTP; 9×MG; 7×ZN; 1×ATP;
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The cryo-EM structure of human C* complex	7w5b PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15234; O43660; O60306; O60508; O75643; O75934; O95391; P08579; P09661; P14678; P38919; P41223; P61326; P62304; P62306; P62308; P62314; P62316; P62318; Q13573; Q14562; Q15029; Q6P2Q9; Q8N5F7; Q8WUQ7; Q96DI7; Q99459; Q9BZJ0; Q9H875; Q9HCG8; Q9HCS7; Q9NW64; Q9P013; Q9UMS4; Q9UNP9; Q9UQ35; Q9Y3C6; Q9Y421; Q9Y5S9;	114-243	100	1×IHP; 1×GTP; 9×MG; 7×ZN; 1×ATP;
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Cryo-EM structure of a human intron lariat spliceosome after Prp43 loaded (ILS2 complex) at 2.9 ang…	6id1 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43143; O43660; O60306; O60508; O75934; P08579; P09661; P14678; P41223; P62304; P62306; P62308; P62314; P62316; P62318; Q13573; Q15029; Q2TBE0; Q6P2Q9; Q96DI7; Q99459; Q9BZJ0; Q9HCS7; Q9NW64; Q9P013; Q9UMS4; Q9UNP9; Q9Y3C6;	114-243	100	1×IHP; 1×GTP; 7×MG; 7×ZN;
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Cryo-EM structure of a human intron lariat spliceosome prior to Prp43 loaded (ILS1 complex) at 2.9 …	6id0 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43660; O60306; O60508; O75934; P08579; P09661; P14678; P41223; P62304; P62306; P62308; P62314; P62316; P62318; Q13573; Q15029; Q2TBE0; Q6P2Q9; Q96DI7; Q99459; Q9BZJ0; Q9HCS7; Q9NW64; Q9P013; Q9UMS4; Q9UNP9; Q9Y3C6;	114-243	100	1×IHP; 1×GTP; 7×MG; 7×ZN;
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Cryo-EM structure of a human post-catalytic spliceosome (P complex) at 3.0 angstrom	6icz PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15234; O43660; O60306; O60508; O75643; O75934; O95391; P08579; P09661; P14678; P38919; P41223; P62304; P62306; P62308; P62314; P62316; P62318; Q13573; Q14562; Q15029; Q6P2Q9; Q96A72; Q96DI7; Q99459; Q9BZJ0; Q9H875; Q9HCG8; Q9HCS7; Q9NW64; Q9P013; Q9UMS4; Q9UNP9; Q9UQ35; Q9Y3C6; Q9Y5S9;	114-243	100	1×IHP; 1×GTP; 9×MG; 7×ZN; 1×ATP;
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The cryo-EM structure of human pre-C*-I complex	7w59 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15234; O43660; O60306; O60508; O75934; P08579; P09661; P14678; P38919; P41223; P61326; P62304; P62306; P62308; P62314; P62316; P62318; Q13573; Q14562; Q15029; Q6P2Q9; Q96DI7; Q99459; Q9BZJ0; Q9GZU8; Q9HCG8; Q9HCS7; Q9NW64; Q9P013; Q9UMS4; Q9UNP9; Q9UQ35; Q9Y3C6; Q9Y5S9;	114-243	100	1×IHP; 1×GTP; 9×MG; 6×ZN; 1×ATP;
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Cryo-EM structure of the human spliceosome just prior to exon ligation at 3.6 angstrom	5xjc PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15234; O43660; O60306; O60508; O75643; O75934; O95391; P08579; P09661; P14678; P38919; P41223; P62304; P62306; P62308; P62314; P62316; P62318; Q13573; Q14562; Q15029; Q6P2Q9; Q96A72; Q96DI7; Q99459; Q9BZJ0; Q9H875; Q9HCG8; Q9HCS7; Q9NW64; Q9P013; Q9UMS4; Q9UQ35; Q9Y3C6; Q9Y5S9;	114-243	100	1×IHP; 1×GTP; 11×MG; 2×ADP; 7×ZN; 2×ATP;
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Cryo-EM structure of a human spliceosome activated for step 2 of splicing (C* complex)	5mqf PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43660; O60306; O60508; O75934; P08579; P09661; P14678; P38919; P41223; P62304; P62306; P62308; P62314; P62316; P62318; Q13573; Q14562; Q15029; Q6P2Q9; Q96DI7; Q99459; Q9BZJ0; Q9HCG8; Q9HCS7; Q9NW64; Q9P013; Q9UMS4; Q9UNP9; Q9UQ35; Q9Y3C6;	128-242	100
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The cryo-EM structure of human post-Bact complex	8i0v PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43660; O60231; O60306; O60508; O75533; O75934; P08579; P09661; P14678; P41223; P62304; P62306; P62308; P62314; P62316; P62318; Q13435; Q13573; Q15029; Q15393; Q15427; Q6P2Q9; Q7RTV0; Q8WUA2; Q96DI7; Q99459; Q9BWJ5; Q9BZJ0; Q9HCG8; Q9HCS7; Q9NW64; Q9P013; Q9UMS4; Q9UNP9; Q9UQ35; Q9Y3C6;	114-227	100	1×IHP; 1×GTP; 7×MG; 6×ZN;
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The cryo-EM structure of human Bact-IV complex	8i0u PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15541; O43660; O60231; O60306; O60508; O75533; O75934; P08579; P09661; P14678; P41223; P62304; P62306; P62308; P62314; P62316; P62318; Q12874; Q13435; Q13573; Q15029; Q15393; Q15427; Q6P2Q9; Q7RTV0; Q8WUA2; Q96DI7; Q99459; Q9BWJ5; Q9BZJ0; Q9HCG8; Q9HCS7; Q9NW64; Q9P013; Q9UMS4; Q9UNP9; Q9UQ35; Q9Y3C6;	114-227	100	1×IHP; 1×GTP; 7×MG; 7×ZN;
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The cryo-EM structure of human C complex	8i0w PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15234; O43660; O60306; O60508; O75643; O75934; P08579; P09661; P14678; P38919; P41223; P61326; P62304; P62306; P62308; P62314; P62316; P62318; Q13573; Q14331; Q15029; Q6P2Q9; Q86X95; Q92620; Q96BP3; Q96DI7; Q99459; Q9BW85; Q9BZJ0; Q9HCG8; Q9HCS7; Q9NW64; Q9NW82; Q9NXE8; Q9P013; Q9ULR0; Q9UMS4; Q9UNP9; Q9UQ35; Q9Y3C6; Q9Y5S9;	114-204	100	1×IHP; 1×GTP; 5×MG; 7×ZN;
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The Cryo-EM Structure of Human Catalytic Step I Spliceosome (C complex) at 4.1 angstrom resolution	5yzg PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15234; O43660; O60306; O60508; O75643; O75934; P08579; P09661; P14678; P38919; P41223; P62304; P62306; P62308; P62314; P62316; P62318; Q13427; Q13573; Q15029; Q6P2Q9; Q92620; Q96A72; Q96BP3; Q96DI7; Q99459; Q9BW85; Q9BZJ0; Q9HCG8; Q9HCS7; Q9NW64; Q9NXE8; Q9P013; Q9ULR0; Q9UMS4; Q9UNP9; Q9UQ35; Q9Y3C6; Q9Y5S9;	114-204	100	1×IHP; 1×GTP; 7×MG; 2×ADP; 7×ZN; 1×ATP;
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Human C Complex Spliceosome - Medium-resolution PERIPHERY	7a5p PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O60306; O60508; O75643; O75934; P08579; P09661; P14678; P38919; P61326; P62304; P62306; P62308; P62314; P62316; P62318; Q13573; Q14331; Q6P2Q9; Q92620; Q96BP3; Q99459; Q9BW85; Q9BZJ0; Q9HCG8; Q9HCS7; Q9NW64; Q9NW82; Q9ULR0; Q9UMS4; Q9UNP9; Q9UQ35; Q9Y5S9;	127-199	100
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1 SWISS-MODEL model

	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	9fmd.20.A	monomer	0.51	20-243		100.00
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

1 SWISS-MODEL model built on isoform sequence

	Isoform	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	Isoform 2	9fmd.20.A	monomer	0.57	20-201		100.00
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O95926 (SYF2_HUMAN) Homo sapiens (Human)

Pre-mRNA-splicing factor SYF2 UniProtKBInterProSTRINGInteractive Modelling

Available Structures

15 Experimental Structures

1 SWISS-MODEL model

1 SWISS-MODEL model built on isoform sequence

Alignments

Background

Resolution

Pre-mRNA-splicing factor SYF2 UniProtKB InterPro STRING Interactive Modelling