SMTL ID : 6qdv.1

Human post-catalytic P complex spliceosome

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-2-1-2-2-2-2-2-1-2-1-1-4-1-1-mer
Ligands
7 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)
1 x K: POTASSIUM ION(Non-functional Binders)
1 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)
1 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Non-covalent)
7 x ZN: ZINC ION(Non-covalent)
1 x I6P: INOSITOL 1,2,3,4,5,6-HEXAKISPHOSPHATE(Covalent)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Fica, S.M. et al., A human postcatalytic spliceosome structure reveals essential roles of metazoan factors for exon ligation. Science (2019)
Release Date
2019-02-20
Peptides
Eukaryotic initiation factor 4A-III: D
RNA-binding protein 8A: E
Protein mago nashi homolog 2: F
Pre-mRNA-processing-splicing factor 8: G
U5 small nuclear ribonucleoprotein 200 kDa helicase: H
116 kDa U5 small nuclear ribonucleoprotein component: I
PRKR-interacting protein 1: J
Cactin: L
Protein FAM32A: M
Pre-mRNA-splicing factor CWC22 homolog: N
Pleiotropic regulator 1: P
SNW domain-containing protein 1: Q
Protein BUD31 homolog: R
Pre-mRNA-splicing factor RBM22: S
U5 small nuclear ribonucleoprotein 40 kDa protein: T
Cell division cycle 5-like protein: U
Spliceosome-associated protein CWC15 homolog: V
Serine/arginine repetitive matrix protein 2: W
Crooked neck-like protein 1: X
Pre-mRNA-splicing factor SYF1: Y
Intron-binding protein aquarius: Z
ATP-dependent RNA helicase DHX8: 0
U2 small nuclear ribonucleoprotein A': 1
U2 small nuclear ribonucleoprotein B'': 2
NF-kappa-B-activating protein: 3
Small nuclear ribonucleoprotein-associated proteins B and B': 4d
Pre-mRNA-splicing factor SLU7: 5
Small nuclear ribonucleoprotein Sm D3: 6g
Small nuclear ribonucleoprotein E: 7i
Small nuclear ribonucleoprotein F: 8j
Small nuclear ribonucleoprotein G: 9k
Small nuclear ribonucleoprotein Sm D1: ae
Peptidyl-prolyl cis-trans isomerase-like 1: b
Small nuclear ribonucleoprotein Sm D2: cf
Pre-mRNA-processing factor 17: h
Pre-mRNA-splicing factor SPF27: l
Pre-mRNA-processing factor 19: mnop
Pre-mRNA-splicing factor SYF2: q
Replication stress response regulator SDE2: r
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
D
7
E
8
F
9
G
A
H
B
I
C
J
D
L
F
M
G
N
H
P
J
Q
K
R
L
S
M
T
N
U
O
V
P
W
R
X
S
Y
T
Z
U
0
V
1
W
2
Y
3
Z
4
b
d
k
5
c
6
d
g
n
7
e
i
p
8
f
j
q
9
g
k
r
a
h
e
l
b
i
c
j
f
m
h
o
l
s
m
t
n
u
o
v
p
w
q
y
r
z

Eukaryotic initiation factor 4A-III

RNA-binding protein 8A

Protein mago nashi homolog 2

Pre-mRNA-processing-splicing factor 8

U5 small nuclear ribonucleoprotein 200 kDa helicase

116 kDa U5 small nuclear ribonucleoprotein component

PRKR-interacting protein 1

Cactin

Protein FAM32A

Pre-mRNA-splicing factor CWC22 homolog

Pleiotropic regulator 1

SNW domain-containing protein 1

Protein BUD31 homolog

Pre-mRNA-splicing factor RBM22

U5 small nuclear ribonucleoprotein 40 kDa protein

Cell division cycle 5-like protein

Spliceosome-associated protein CWC15 homolog

Serine/arginine repetitive matrix protein 2

Crooked neck-like protein 1

Pre-mRNA-splicing factor SYF1

Intron-binding protein aquarius

ATP-dependent RNA helicase DHX8

U2 small nuclear ribonucleoprotein A'

U2 small nuclear ribonucleoprotein B''

NF-kappa-B-activating protein

Small nuclear ribonucleoprotein-associated proteins B and B'

Pre-mRNA-splicing factor SLU7

Small nuclear ribonucleoprotein Sm D3

Small nuclear ribonucleoprotein E

Small nuclear ribonucleoprotein F

Toggle Identical (8j)

Small nuclear ribonucleoprotein G

Toggle Identical (9k)

Small nuclear ribonucleoprotein Sm D1

Toggle Identical (ae)

Peptidyl-prolyl cis-trans isomerase-like 1

Small nuclear ribonucleoprotein Sm D2

Toggle Identical (cf)

Pre-mRNA-processing factor 17

Pre-mRNA-splicing factor SPF27

Pre-mRNA-processing factor 19

Toggle Identical (mo) Toggle Identical (np)

Pre-mRNA-splicing factor SYF2

Replication stress response regulator SDE2

Related Entries With Identical Sequence

1b34.1 | 2hyi.1 | 2hyi.2 | 4f7u.1 | 4f7u.2 | 4pjo.1 | 4pjo.2 | 4pjo.3 | 4pjo.4 | 4v98.1 | 4v98.2 | 4v98.3 | 4v98.4 | 4v98.5 | 4v98.6 | 4v98.7 | 4v98.8 | 4v98.9 | 4v98.10 | 4v98.11 | 4v98.12 | 4v98.13 | 4v98.14 | 4v98.15 | 4v98.16 | 4v98.17 | 4v98.18 | 4v98.19 | 4v98.20 | 4wzj.1  more...