P03089 (VP1_POVJC) JC polyomavirus (JCPyV) (JCV)
Major capsid protein VP1 UniProtKBInterProInteractive Modelling
354 aa; Sequence (Fasta) ;
22 identical sequences
It is possible new templates exist for this target since these models were created.
Available Structures
20 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Ligands | ||
|---|---|---|---|---|---|---|
| JC polyomavirus VP1 in complex with scFv 27C11 |
Heteromer | |||||
| Assess | ||||||
| JC polyomavirus VP1 in complex with Fab 27C2 |
Heteromer | |||||
| Assess | ||||||
| JC polyomavirus VP1 in complex with Fab 98D3 |
Heteromer | |||||
| Assess | ||||||
| JC polyomavirus VP1 in complex with scFv 29B1 |
Heteromer | |||||
| Assess | ||||||
| JC Polyomavirus VP1 in complex with 3'-Sialyllactose glycomacromolecules (aliphatic linker) | homo-5-mer | 3×BGC; 7×EDO; 3×CL; 10×NA; 1×PEG; | ||||
| Assess | ||||||
| JC Polyomavirus VP1 in complex with 3'-Sialyllactose glycomacromolecules (aromatic linker) | homo-5-mer | 2×BGC; 1×GAL; 2×PEG; | ||||
| Assess | ||||||
| JC Polyomavirus VP1 in complex with 6'-Sialyllactose glycomacromolecules (aliphatic linker) | homo-5-mer | 2×BGC; 1×GAL; 8×EDO; | ||||
| Assess | ||||||
| JC Polyomavirus VP1 five-fold pore mutant N221W | homo-5-mer | 14×GOL; 7×EDO; | ||||
| Assess | ||||||
| JC Polyomavirus VP1 five-fold pore mutant N221Q | homo-5-mer | 5×GOL; 4×EDO; | ||||
| Assess | ||||||
| JC polyomavirus VP1 | homo-5-mer | 5×GOL; 5×EDO; | ||||
| Assess | ||||||
| JC polyomavirus VP1 in complex with LSTc | homo-5-mer | 2×BGC; 5×GOL; 6×EDO; | ||||
| Assess | ||||||
| JC Polyomavirus VP1 five-fold pore mutant P223M | homo-5-mer | 5×GOL; 2×EDO; | ||||
| Assess | ||||||
| JC Mad-1 polyomavirus VP1 in complex with GD1b oligosaccharide | homo-5-mer | 2×SIA; 17×GOL; 7×EDO; 2×K; 1×SIA; | ||||
| Assess | ||||||
| JC Polyomavirus VP1 in complex with 6'-Sialyllactose glycomacromolecules (aromatic linker) | homo-5-mer | 2×BGC; 1×GAL; 9×EDO; 1×GOL; 1×PEG; 1×CL; | ||||
| Assess | ||||||
| JC Mad-1 polyomavirus VP1 in complex with GD1a oligosaccharide | homo-5-mer | 9×GOL; 6×EDO; 3×K; 3×SIA; | ||||
| Assess | ||||||
| L54F Variant of JC Polyomavirus Major Capsid Protein VP1 | homo-5-mer | 10×GOL; 2×EDO; | ||||
| Assess | ||||||
| S268Y Variant of JC Polyomavirus Major Capsid Protein VP1 | homo-5-mer | 5×GOL; 3×EDO; | ||||
| Assess | ||||||
| JC Mad-1 polyomavirus VP1 in complex with GM2 oligosaccharide | homo-5-mer | 3×BGC; 7×GOL; 14×EDO; 2×K; | ||||
| Assess | ||||||
| S268F Variant of JC Polyomavirus Major Capsid Protein VP1 in Complex with LSTc | homo-5-mer | 1×NAG; 5×GOL; 1×EDO; | ||||
| Assess | ||||||
| JC Mad-1 polyomavirus VP1 in complex with GM1 oligosaccharide | homo-5-mer | 1×GAL; 2×BGC; 5×GOL; 15×EDO; 5×K; | ||||
| Assess | ||||||
1 SWISS-MODEL model
| Template | Oligo-state | QMEANDisCo | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 1sva.1.A | homo-6-mer | 0.75 | 76.49 | |||
| Assess | ||||||