P0A6K3 (DEF_ECOLI) Escherichia coli (strain K12)
Peptide deformylase UniProtKBProtein AtlasInterProSTRINGInteractive Modelling
169 aa; Sequence (Fasta) ;
72 identical sequences
It is possible new templates exist for this target since these models were created.
Available Structures
33 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Seq id (%) | Ligands | |
|---|---|---|---|---|---|---|
| Crystal structure of E. coli peptide deformylase and methionine aminopeptidase fitted into the cryo… |
Heteromer P0AE18; | 100 | ||||
| Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and tr… |
Heteromer P02358; P02359; P02413; P0A7J7; P0A7K6; P0A7L3; P0A7L8; P0A7M2; P0A7M6; P0A7M9; P0A7N4; P0A7N9; P0A7P5; P0A7Q1; P0A7Q6; P0A7R1; P0A7R5; P0A7R9; P0A7S3; P0A7S9; P0A7T3; P0A7T7; P0A7U3; P0A7U7; P0A7V0; P0A7V3; P0A7V8; P0A7W1; P0A7W7; P0A7X3; P0A850; P0AA10; P0ADY3; P0ADY7; P0ADZ0; P0ADZ4; P0AG44; P0AG48; P0AG51; P0AG55; P0AG59; P0AG63; P0C018; P60422; P60438; P60624; P60723; P61175; P62399; P68679; P68919; | 100 | ||||
| Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigg… |
Heteromer P02358; P02359; P02413; P0A7J7; P0A7K6; P0A7L3; P0A7L8; P0A7M2; P0A7M6; P0A7N4; P0A7N9; P0A7P5; P0A7Q1; P0A7Q6; P0A7R1; P0A7R5; P0A7R9; P0A7S3; P0A7S9; P0A7T3; P0A7T7; P0A7U3; P0A7U7; P0A7V0; P0A7V3; P0A7V8; P0A7W1; P0A7W7; P0A7X3; P0A850; P0AA10; P0ADY3; P0ADY7; P0ADZ0; P0ADZ4; P0AG44; P0AG48; P0AG51; P0AG55; P0AG59; P0AG63; P0C018; P60422; P60438; P60624; P60723; P61175; P62399; P68679; P68919; | 100 | ||||
| Structure of PDF binding helix in complex with the ribosome. |
Heteromer P02358; P02359; P02413; P0A7J7; P0A7K6; P0A7L3; P0A7L8; P0A7M6; P0A7M9; P0A7N4; P0A7N9; P0A7P5; P0A7Q1; P0A7Q6; P0A7R1; P0A7R6; P0A7R9; P0A7S3; P0A7T1; P0A7T4; P0A7T9; P0A7U3; P0A7U7; P0A7V1; P0A7V4; P0A7V8; P0A7W1; P0A7W7; P0A7X3; P0AA10; P0ADY3; P0ADY7; P0ADZ0; P0ADZ4; P0AG44; P0AG48; P0AG51; P0AG55; P0AG59; P0AG63; P0C018; P60422; P60438; P60624; P60723; P61175; P62399; P68680; P68919; | 93.75 | 170×MG; | |||
| PDF PROTEIN IS CRYSTALLIZED AS NI2+ CONTAINING FORM, COCRYSTALLIZED WITH INHIBITOR POLYETHYLENE GLY… | homo-3-mer | 100 | 3×NI; 3×2PE; 2×SO4; | |||
| PEPTIDE DEFORMYLASE AS ZN2+ CONTAINING FORM (NATIVE) IN COMPLEX WITH INHIBITOR POLYETHYLENE GLYCOL | monomer | 100 | 1×ZN; 1×2PE; | |||
| PEPTIDE DEFORMYLASE AS FE2+ CONTAINING FORM (NATIVE) IN COMPLEX WITH INHIBITOR POLYETHYLENE GLYCOL | monomer | 100 | 1×FE; 1×2PE; | |||
| PEPTIDE DEFORMYLASE AS NI2+ CONTAINING FORM IN COMPLEX WITH TRIPEPTIDE MET-ALA-SER | monomer | 100 | 1×NI; | |||
| PEPTIDE DEFORMYLASE AS ZN2+ CONTAINING FORM IN COMPLEX WITH TRIPEPTIDE MET-ALA-SER | monomer | 100 | 1×ZN; | |||
| PEPTIDE DEFORMYLASE AS NI2+ CONTAINING FORM | monomer | 100 | 1×NI; | |||
| PEPTIDE DEFORMYLASE AS ZN2+ CONTAINING FORM | monomer | 100 | 1×ZN; | |||
| E. coli peptide deformylase crystal structure fitted into the cryo-EM density map of E. coli 70S ri… | monomer | 100 | ||||
| E.coli Peptide Deformylase with bound inhibitor BB4 | monomer | 100 | 1×ZN; 1×BB4; 1×GOL; 2×DMS; | |||
| Chloro complex of the Ni-Form of E.coli deformylase | monomer | 100 | 1×NI; 1×CL; 1×EOH; | |||
| E.coli Polypeptide Deformylase complexed with SB-485343 | monomer | 100 | 1×NI; 1×SB7; | |||
| COBALT DEFORMYLASE INHIBITOR COMPLEX FROM E.COLI | monomer | 100 | 1×CO; 1×PO4; 1×MLN; | |||
| ZINC DEFORMYLASE INHIBITOR COMPLEX FROM E.COLI | monomer | 100 | 1×ZN; 1×PO4; 1×MLN; | |||
| High Resolution Crystals Structure of Cobalt- Peptide Deformylase Bound To Formate | monomer | 100 | 1×CO; 1×FMT; | |||
| High Resolution Crystal Structure of Escherichia coli Iron- Peptide Deformylase Bound To Formate | monomer | 100 | 1×FE; 6×FMT; | |||
| formate complex of the Ni-Form of E.coli deformylase | monomer | 100 | 1×NI; 1×FMT; | |||
| E.coli Peptide Deformylase with bound inhibitor | monomer | 100 | 1×VLK; 1×ZN; | |||
| THE CRYSTAL STRUCTURE OF E.COLI PEPTIDE DEFORMYLASE COMPLEXED WITH ACTINONIN | monomer | 100 | 1×NI; 1×BB2; | |||
| High Resolution Crystal Structure of Escherichia coli Zinc- Peptide Deformylase bound to formate | monomer | 100 | 1×ZN; 10×FMT; | |||
| Crystal Structure of E.coli Peptide Deformylase Complexed with Antibiotic Actinonin | monomer | 100 | 1×ZN; 1×BB2; | |||
| CRYSTAL STRUCTURE OF E.COLI POLYPEPTIDE DEFORMYLASE COMPLEXED WITH THE INHIBITOR BB-3497 | monomer | 100 | 1×NI; 1×BB1; | |||
| The structure of E.coli peptide deformylase (PDF) in complex with peptidomimetic ligand BB2827 | monomer | 100 | 1×NI; 1×2BB; | |||
| PEPTIDE DEFORMYLASE | monomer | 100 | 1×ZN; | |||
| E.coli deformylase with Co(II) and hydrosulfide | monomer | 100 | 1×CO; 1×H2S; | |||
| peptide deformylase (Co-form) with mercaptoethanol | monomer | 100 | 1×CO; 1×CL; 1×BME; | |||
| peptide deformylase (Ni-form) with hydrosulfide | monomer | 100 | 1×NI; 1×H2S; | |||
| Solution structure of peptide deformylase complexed with actinonin | monomer | 100 | 1×ZN; 1×BB2; | |||
| PEPTIDE DEFORMYLASE CATALYTIC CORE (RESIDUES 1-147), NMR, 9 STRUCTURES | monomer | 100 | 1×ZN; | |||
| PEPTIDE DEFORMYLASE CATALYTIC CORE (RESIDUES 1-147), NMR, 20 STRUCTURES | monomer | 100 | 1×NI; | |||
1 SWISS-MODEL model
| Template | Oligo-state | QMEAN | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 1bs4.2.A | monomer | 0.87 | 1×ZN; 1×2PE; | 100.00 | ||