P0C6F8 (R1A_BCHK3) Bat coronavirus HKU3 (BtCoV) (SARS-like coronavirus HKU3)
Replicase polyprotein 1a UniProtKBInterProInteractive Modelling
4376 aa; Sequence (Fasta) Identical sequences: Bat coronavirus HKU3: A0A7G6UAJ8
Molecule Processing
| Non-structural protein 1 | |
| Non-structural protein 2 | |
| Non-structural protein 3 | |
| Non-structural protein 4 | |
| 3C-like proteinase | |
| Non-structural protein 6 | |
| Non-structural protein 7 | |
| Non-structural protein 8 | |
| Non-structural protein 9 | |
| Non-structural protein 10 | |
| Non-structural protein 11 |
It is possible new templates exist for this target since these models were created.
Sequence Features
| 1645 | For PL-PRO activity | ||
| 1806 | For PL-PRO activity | ||
| 3275 | For 3CL-PRO activity | ||
| 3379 | For 3CL-PRO activity | ||
| 4298 | Zinc 1 | ||
| 4301 | Zinc 1 | ||
| 4307 | Zinc 1 | ||
| 4314 | Zinc 1 | ||
| 4341 | Zinc 2 | ||
| 4344 | Zinc 2 | ||
| 4352 | Zinc 2 | ||
| 4354 | Zinc 2 | ||
| 2197-2217 | Helical | ||
| 2298-2318 | Helical | ||
| 2345-2365 | Helical | ||
| 2744-2764 | Helical | ||
| 2986-3006 | Helical | ||
| 3016-3036 | Helical | ||
| 3048-3068 | Helical | ||
| 3071-3091 | Helical | ||
| 3099-3119 | Helical | ||
| 3136-3156 | Helical | ||
| 3558-3578 | Helical | ||
| 3580-3600 | Helical | ||
| 3606-3626 | Helical | ||
| 3652-3672 | Helical | ||
| 3679-3698 | Helical | ||
| 3722-3742 | Helical | ||
| 3750-3770 | Helical | ||
| 1723-1760 | C4-type | ||
| 4298-4314 | |||
| 4341-4354 | |||
| 179-180 | Cleavage; by PL-PRO | ||
| 818-819 | Cleavage; by PL-PRO | ||
| 3234-3235 | Cleavage; by 3CL-PRO | ||
| 3540-3541 | Cleavage; by 3CL-PRO | ||
| 3830-3831 | Cleavage; by 3CL-PRO | ||
| 3913-3914 | Cleavage; by 3CL-PRO | ||
| 4111-4112 | Cleavage; by 3CL-PRO | ||
| 4224-4225 | Cleavage; by 3CL-PRO | ||
| 4363-4364 | Cleavage; by 3CL-PRO | ||
| 8-144 | Non-structural protein NSP1, betacoronavirus IPR021590PF11501 | ||
| 183-423 | Nonstructural protein 2, N-terminal domain, coronavirus IPR043615PF19211 | ||
| 652-818 | Non-structural protein 2, C-terminal domain, coronavirus IPR043613PF19212 | ||
| 881-1024 | Non-structural protein NSP3, N-terminal, betacoronavirus IPR024358PF12379 | ||
| 1031-1136 | Macro domain IPR002589PF01661 | ||
| 1321-1463 | Non-structural protein NSP3, SUD-M domain, betacoronavirus IPR024375PF11633 | ||
| 1468-1532 | DPUP/SUD, C-terminal, betacoronavirus IPR022733PF12124 | ||
| 1535-1853 | Peptidase C16, coronavirus IPR013016PF08715 | ||
| 1888-1990 | Non-structural protein NSP3, nucleic acid-binding (NAR) domain, betacoronavirus IPR032592PF16251 | ||
| 2232-2719 | Coronavirus replicase NSP3, C-terminal IPR043611PF19218 | ||
| 2759-3112 | Coronavirus replicase NSP4, N-terminal IPR043612PF19217 | ||
| 3137-3232 | Non-structural protein NSP4, C-terminal, coronavirus IPR032505PF16348 | ||
| 3263-3553 | Peptidase C30, coronavirus IPR008740PF05409 | ||
| 3569-3830 | Non-structural protein 6, coronavirus IPR043610PF19213 | ||
| 3831-3913 | Non-structural protein NSP7, coronavirus IPR014828PF08716 | ||
| 3914-4110 | Non-structural protein NSP8, coronavirus-like IPR014829PF08717 | ||
| 4112-4224 | Non-structural protein NSP9, coronavirus IPR014822PF08710 | ||
| 4233-4355 | RNA synthesis protein NSP10, coronavirus IPR018995PF09401 |
Sequence Alignments
Non-structural protein 1 1-179; PRO_0000338075
| Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) |
|---|---|---|---|---|---|
| monomer | -0.05 | 7k3n.1.A | 83.89 | ||
| Assess | |||||
Non-structural protein 3 819-2734; PRO_0000338077
| Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) |
|---|---|---|---|---|---|
| homo-4-mer | -0.06 | 7cjd.1.A | 81.45 | ||
| Assess | |||||
| monomer | -0.60 | 2acf.4.A | 86.21 | ||
| Assess | |||||
| homo-2-mer | 1.07 | 2w2g.1.A | 93.94 | ||
| Assess | |||||
| monomer | -1.11 | 2kqw.1.A | 94.30 | ||
| Assess | |||||
Non-structural protein 8 3914-4111; PRO_0000338082
| Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) |
|---|---|---|---|---|---|
| monomer | 0.12 | 6nur.1.D | 98.99 | ||
| Assess | |||||
| monomer | 0.50 | 2ahm.1.H | 98.99 | ||
| Assess | |||||
| monomer | 0.37 | 6nur.1.B | 98.99 | ||
| Assess | |||||
| monomer | -0.77 | 2ahm.1.E | 98.99 | ||
| Assess | |||||