P0C6X9 (R1AB_CVMA5) Murine coronavirus (strain A59) (MHV-A59) (Murine hepatitis virus)

Replicase polyprotein 1ab UniProtKBInterProInteractive Modelling

7176 aa; Sequence (Fasta)

Sequence Features

 1121For PL1-PRO activity.
 1272For PL1-PRO activity.
 1716For PL2-PRO activity.
 1873For PL2-PRO activity.
 3374For 3CL-PRO activity.
 3478For 3CL-PRO activity.
 5387Zinc 1.
 5390Zinc 1.
 5398Zinc 2.
 5401Zinc 1.
 5408Zinc 1.
 5411Zinc 2.
 5415Zinc 2.
 5421Zinc 2.
 5432Zinc 3.
 5437Zinc 3.
 5454Zinc 3.
 5457Zinc 3.
 1699P -> S (in strain: Isolate C12 mutant).
 2196M -> K (in strain: Isolate C12 mutant).
 5773R -> S (in strain: Isolate C12 mutant).
 2225-2245Helical.
 2286-2306Helical.
 2314-2334Helical.
 2400-2420Helical.
 2442-2462Helical.
 2625-2645Helical.
 2847-2867Helical.
 3096-3116Helical.
 3118-3138Helical.
 3150-3170Helical.
 3177-3197Helical.
 3202-3222Helical.
 3644-3664Helical.
 3674-3694Helical.
 3699-3719Helical.
 3742-3762Helical.
 3769-3789Helical.
 3796-3816Helical.
 3840-3860Helical.
 1198-1226C4-type 1.
 1794-1830C4-type 2.
 4391-4407
 4433-4446
 5663-5670ATP.
 247-248Cleavage; by PL1-PRO.
 832-833Cleavage; by PL1-PRO.
 2837-2838Cleavage; by PL2-PRO.
 3333-3334Cleavage; by 3CL-PRO.
 3635-3636Cleavage; by 3CL-PRO.
 3921-3922Cleavage; by 3CL-PRO.
 4013-4014Cleavage; by 3CL-PRO.
 4207-4208Cleavage; by 3CL-PRO.
 4317-4318Cleavage; by 3CL-PRO.
 4454-4455Cleavage; by 3CL-PRO.
 5382-5383Cleavage; by 3CL-PRO.
 5982-5983Cleavage; by 3CL-PRO.
 6503-6504Cleavage; by 3CL-PRO.
 6877-6878Cleavage; by 3CL-PRO.
 1-355Betacoronavirus NSP1
IPR022570PF11963
 952-1074Betacoronavirus NSP1
IPR022570PF11963
 1084-1332Peptidase C30/C16, Betacoronavirus
IPR002705PF01831
 1344-1449Macro domain
IPR002589PF01661
 1611-1913Papain-like viral protease
IPR014827PF08715
 1945-2061Replicase polyprotein, nucleic acid-binding domain (NAR)
IPR032592PF16251
 3237-3331Coronavirus nonstructural protein 4, C-terminal
IPR032505PF16348
 3362-3648Peptidase C30, Coronavirus endopeptidase
IPR008740PF05409
 3922-4010Non structural protein 7
IPR014828PF08716
 4011-4207NSP8 replicase
IPR014829PF08717
 4208-4317NSP9 replicase
IPR014822PF08710
 4326-4446RNA synthesis protein NSP10, coronavirus
IPR018995PF09401
 4468-4816RNA polymerase, N-terminal, coronaviral
IPR009469PF06478
 4996-5223RNA-directed RNA polymerase, C-terminal domain
IPR001205PF00680
 5814-5956DNA2/NAM7 helicase-like, AAA domain
IPR041679PF13087
 5984-6571NSP11
IPR009466PF06471
 6879-7175Coronavirus non-structural protein NSP16
IPR009461PF06460

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRangeDownloadAssess
X-ray structure of MHV PLP2 (Cys1716Ser) catalytic mutant in complex with free ubiquitin Heteromer
P0CG47; 		5×GOL; 1×FMT; 1×ZN;5wfi1609-1909
'X-ray structural of three tandemly linked domains of nsp3 from murine hepatitis virus at 2.60 An...homo-3-mer 15×GOL; 3×ZN;4ypt1533-1910
'C425S mutant of the C-terminal cytoplasmic domain of non-structural protein 4 from mouse hepatit...homo-2-mer 3vcb3245-3332
'Crystal structure of the C-terminal cytoplasmic domain of non-structural protein 4 from mouse he...homo-2-mer 3vc83245-3329
'The Crystal Structure of Main Protease from Mouse Hepatitis Virus A59 in Complex with an inhibitor'monomer 6jij3334-3631

Homology models

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownloadAssess
monomer 2×ZN;-1.056nur.1.A4571-5369
66.52
monomer -2.042gth.1.A6504-6872
100.00
monomer -2.585yn5.1.A6878-7171
62.63
monomer 2×ZN;-3.595c8t.2.B5985-6501
58.69