P16113 (PYP_HALHA) Halorhodospira halophila (Ectothiorhodospira halophila)

Photoactive yellow protein UniProtKBInterProInteractive Modelling

125 aa; Sequence (Fasta)

Available Structures

100 Experimental Structures

DescriptionPDB IDOligo-stateRangeLigands
Photoactive Yellow Protein with 3,5-dichlorotyrosine substituted at position 42
6mmd
homo-2-mer1-125
2×HC4;
Assess
FAST in a domain-swapped dimer form
7av6
homo-2-mer25-125
4×FMT;
Assess
PYP Ultra-high resolution structure of a Bacterial Photoreceptor
1nwz
monomer1-125
1×HC4;
Assess
Crystal structure of photoactive yellow protein (PYP); F96(4-IF) construct with 3-Br-p-coumaric aci…
6un0
monomer1-125
1×QBV;
Assess
PHOTOACTIVE YELLOW PROTEIN, CRYOTRAPPED EARLY LIGHT CYCLE INTERMEDIATE
3pyp
monomer1-125
1×HC4;
Assess
Crystal structure of photoactive yellow protein (PYP); 3-Br-p-coumaric acid chromophore
6umz
monomer1-125
1×QBV;
Assess
Crystal structure of photoactive yellow protein (PYP); F96(4-IF) construct
6umy
monomer1-125
1×HC4;
Assess
Crystal structure of photoactive yellow protein (PYP); F96oCNF construct
7sjj
monomer1-125
1×HC4;
Assess
CRYOTRAPPED CRYSTAL STRUCTURE OF THE E46Q MUTANT OF PHOTOACTIVE YELLOW PROTEIN UNDER CONTINUOUS ILL…
1ot6
monomer1-125
1×HC4;
Assess
Crystal structure of photoactive yellow protein (PYP); C69U construct (selenocysteine incorporation)
6un2
monomer1-125
1×HC4;
Assess
CRYOTRAPPED STATE IN WILD TYPE PHOTOACTIVE YELLOW PROTEIN, INDUCED WITH CONTINUOUS ILLUMINATION AT …
1ot9
monomer1-125
1×HC4;
Assess
Crystal structure of photoactive yellow protein (PYP); F96oCNF I49T construct
8dzy
monomer1-125
1×HC4;
Assess
Crystal structure of photoactive yellow protein (PYP); F62oCNF construct
7spw
monomer1-125
1×HC4;
Assess
Crystal structure of photoactive yellow protein (PYP); F96oCNF T103V construct
8e02
monomer1-125
1×HC4;
Assess
E46Q MUTANT OF PHOTOACTIVE YELLOW PROTEIN, P63 AT 295K
1ota
monomer1-125
1×HC4;
Assess
CRYSTAL STRUCTURE OF THE PHOTOACTIVE YELLOW PROTEIN MUTANT Y42F
1f9i
monomer1-125
1×HC4;
Assess
WILD TYPE PHOTOACTIVE YELLOW PROTEIN, P63 AT 295K
1otb
monomer1-125
1×HC4;
Assess
CRYSTAL STRUCTURE OF THE PHOTOACTIVE YELLOW PROTEIN MUTANT T50V
1f98
monomer1-125
1×HC4;
Assess
Initial Events in the Photocycle of Photoactive Yellow Protein
1uwp
monomer1-125
1×HC4; 2×SO4;
Assess
The Initial Events in the Photocycle of Photoactive Yellow Protein: A Common Mechanism on Light Act…
1uwn
monomer1-125
1×HC4; 2×SO4;
Assess
Crystal structure of photoactive yellow protein (PYP); F96oCNF M100N construct
8e1l
monomer1-125
1×HC4;
Assess
X-ray Crystal Structure of Photoactive Yellow Protein, Wild type, at 295K
2zoh
monomer1-125
1×HC4;
Assess
Photoactive Yellow Protein with covalently bound 3,5-dichloro-4-hydroxycinnamic acid chromophore
6mhi
monomer1-125
1×YYZ;
Assess
PHOTOACTIVE YELLOW PROTEIN, DARK STATE (UNBLEACHED)
2phy
monomer1-125
1×HC4;
Assess
E46Q MUTANT OF PHOTOACTIVE YELLOW PROTEIN, P65 AT 295K
1oti
monomer1-125
1×HC4;
Assess
R52Q Mutant of Photoactive Yellow Protein, P65 Form
2d02
monomer1-125
1×HC4;
Assess
Photoactive Yellow Protein with 3-chlorotyrosine substituted at position 42
6mkt
monomer1-125
1×HC4;
Assess
Structure of the pB1 intermediate from time-resolved Laue crystallography
1ts0
monomer1-125
1×HC4;
Assess
Structures of PR1 intermediate of photoactive yellow protein E46Q mutant from time-resolved laue cr…
4i3j
monomer1-125
1×HC4;
Assess
Time Resolved Serial Femtosecond Crystallography Captures High Resolution Intermediates of PYP
4wl9
monomer1-125
1×HC4;
Assess
Early intermediate IE1 from time-resolved crystallography of the E46Q mutant of PYP
1t18
monomer1-125
1×HC4;
Assess
Structures of IT intermediates from time-resolved laue crystallography collected at 14ID-B, APS
4i38
monomer1-125
1×HC4;
Assess
Structure of the pB2 intermediate from time-resolved Laue crystallography
1ts6
monomer1-125
1×HC4;
Assess
Photoactive Yellow Protein PYP Dark Full
6p5g
monomer1-125
Assess
Femtosecond Structural Dynamics Drives the Trans/Cis Isomerization in Photoactive Yellow Protein: 2…
5hd5
monomer1-125
Assess
Femtosecond Structural Dynamics Drives the Trans/Cis Isomerization in Photoactive Yellow Protein: 3…
5hds
monomer1-125
Assess
Femtosecond Structural Dynamics Drives the Trans/Cis Isomerization in Photoactive Yellow Protein: 8…
5hdd
monomer1-125
Assess
Early intermediate IE2 from time-resolved crystallography of the E46Q mutant of PYP
1t19
monomer1-125
1×HC4;
Assess
Structures of ICT and PR1 intermediates from time-resolved laue crystallography collected at 14ID-B…
4i39
monomer1-125
1×HC4;
Assess
Structures of PR1 and PR2 intermediates from time-resolved laue crystallography
4hy8
monomer1-125
1×HC4;
Assess
Structure of the pR cis wobble and pR E46Q intermediates from time-resolved Laue crystallography
1ts7
monomer1-125
1×HC4;
Assess
Structure of IT Intermediate from time-resolved laue crystallography
3ve3
monomer1-125
1×HC4;
Assess
Late intermediate IL1 from time-resolved crystallography of the E46Q mutant of PYP
1t1a
monomer1-125
1×HC4;
Assess
Structures of PR1 and PR2 intermediates from time-resolved laue crystallography collected at 14ID-B…
4i3a
monomer1-125
1×HC4;
Assess
Femtosecond Structural Dynamics Drives the Trans/Cis Isomerization in Photoactive Yellow Protein: 1…
5hdc
monomer1-125
Assess
Photoactivated chromophore conformation in Photoactive Yellow Protein (E46Q mutant) from 10 microse…
1s1y
monomer1-125
1×HC4;
Assess
Photoactivated chromophore conformation in Photoactive Yellow Protein (E46Q mutant) from 10 to 500 …
1s1z
monomer1-125
1×HC4;
Assess
Structures of ICT and PR1 intermediates from time-resolved laue crystallography
3ve4
monomer1-125
1×HC4;
Assess
Late intermediate IL2 from time-resolved crystallography of the E46Q mutant of PYP
1t1b
monomer1-125
1×HC4;
Assess
Late intermediate IL3 from time-resolved crystallography of the E46Q mutant of PYP
1t1c
monomer1-125
1×HC4;
Assess
Time Resolved Serial Femtosecond Crystallography Captures High Resolution Intermediates of PYP
4wla
monomer1-125
1×HC4;
Assess
Photoactive Yellow Protein PYP 30ps
6p5d
monomer1-125
Assess
The PR2 Photocycle Intermediate of Photoactive Yellow Protein
4bbu
monomer1-125
1×HC4;
Assess
Structure of the pR cis planar intermediate from time-resolved Laue crystallography
1ts8
monomer1-125
1×HC4;
Assess
The PB0 Photocycle Intermediate of Photoactive Yellow Protein
4bbv
monomer1-125
1×HC4;
Assess
Photoactive Yellow Protein PYP 80ps
6p5e
monomer1-125
Assess
The PR0 Photocycle Intermediate of Photoactive Yellow Protein
4b9o
monomer1-125
1×HC4;
Assess
The PR1 Photocycle Intermediate of Photoactive Yellow Protein
4bbt
monomer1-125
1×HC4;
Assess
Femtosecond Structural Dynamics Drives the Trans/Cis Isomerization in Photoactive Yellow Protein: D…
5hd3
monomer1-125
Assess
Structures of IT intermediate of photoactive yellow protein E46Q mutant from time-resolved laue cry…
4i3i
monomer1-125
1×HC4;
Assess
Photoactive Yellow Protein PYP 10ps
6p4i
monomer1-125
Assess
Photoactive Yellow Protein with covalently bound 3-chloro-4-hydroxycinnamic acid chromophore
6mhn
monomer1-125
1×YAZ;
Assess
Photoactive Yellow Protein PYP Pure Dark
6p5f
monomer1-125
Assess
Structure of pB intermediate of Photoactive yellow protein (PYP) at pH 7
3ume
monomer1-125
1×HC4;
Assess
Structure of pB intermediate of Photoactive yellow protein (PYP) at pH 4.
3umd
monomer1-125
1×HC4;
Assess
PHOTOACTIVE YELLOW PROTEIN, 1 NANOSECOND INTERMEDIATE (287K)
2pyr
monomer1-125
1×HC4;
Assess
PHOTOACTIVE YELLOW PROTEIN, PHOTOSTATIONARY STATE, 50% GROUND STATE, 50% BLEACHED
2pyp
monomer1-125
1×HC4;
Assess
Reaction Intermediate in the Photocycle of PYP, intermediate occupied between 100 micro-seconds to …
1s4s
monomer1-125
1×HC4;
Assess
Structure of a reaction intermediate in the photocycle of PYP extracted by a SVD-driven analysis
1s4r
monomer1-125
1×HC4;
Assess
Chloride Sites in Photoactive Yellow Protein
9az7
monomer1-125
1×HC4; 3×CL;
Assess
Chloride Sites in Photoactive Yellow Protein (Chloride-Free Reference Structure)
9az9
monomer1-125
1×HC4;
Assess
Structural role of Y98 in PYP: effects on fluorescence, gateway and photocycle recovery
2i9v
monomer1-125
1×HC4;
Assess
Neutron and X-ray structural studies of short hydrogen bonds in Photoactive Yellow Protein (PYP)
2qws
monomer1-125
1×HC4;
Assess
Signaling state of Photoactive Yellow Protein
2kx6
monomer1-125
1×HC4;
Assess
PHOTOACTIVE YELLOW PROTEIN, DARK STATE (UNBLEACHED), SOLUTION STRUCTURE, NMR, 26 STRUCTURES
3phy
monomer1-125
1×HC4;
Assess
PYP mutant - E46Q
5gx9
monomer1-125
1×HC4;
Assess
Neutron Crystal Structure of Photoactive Yellow Protein, Wild type, at 295K
2zoi
monomer1-125
1×HC4;
Assess
Crystal structure of photoactive yellow protein (PYP); F28oCNF construct
7spx
monomer2-125
1×HC4;
Assess
Crystal structure of photoactive yellow protein (PYP); F96oCNF M100E construct
8e09
monomer2-125
1×HC4;
Assess
Crystal structure of photoactive yellow protein (PYP); F96oCNF M100Q construct
8e1k
monomer2-125
1×HC4;
Assess
Crystal structure of photoactive yellow protein (PYP); F96oCNF M100H construct
8dzu
monomer2-125
1×HC4;
Assess
Crystal structure of photoactive yellow protein (PYP); F96oCNF M100K construct
8dzx
monomer2-125
1×HC4;
Assess
Crystal structure of photoactive yellow protein (PYP); F92oCNF construct
7spv
monomer2-125
1×HC4;
Assess
Crystal structure of photoactive yellow protein (PYP); F96oCNF M100D construct
8e03
monomer2-125
1×HC4;
Assess
Wild Type Photoactive Yellow Protein, P65 Form
2d01
monomer2-125
1×HC4;
Assess
PYP ultra-high resolution of a bacterial photoreceptor
2qj7
monomer3-125
1×HC4;
Assess
PYP ultra-high resolution of a bacterial photoreceptor
2qj5
monomer3-125
1×HC4;
Assess
Crystal Structure of the Photoactive Yellow Protein Reconstituted with Caffeic Acid at 1.16 A Resol…
1kou
monomer4-125
1×DHC; 1×NBU;
Assess
Crystal structure of PYP E46Q mutant
1ugu
monomer4-125
1×HC4;
Assess
CRYSTAL STRUCTURE OF THE P65 CRYSTAL FORM OF PHOTOACTIVE YELLOW PROTEIN
1d7e
monomer4-125
1×HC4;
Assess
E46Q MUTANT OF PHOTOACTIVE YELLOW PROTEIN, P65 AT 110K
1ote
monomer4-125
1×HC4;
Assess
Crystal structure of the P65 crystal form of photoactive yellow protein G47S mutant
1gsv
monomer4-125
1×HC4;
Assess
CRYSTAL STRUCTURE OF THE P65 CRYSTAL FORM OF PHOTOACTIVE YELLOW PROTEIN G47S/G51S MUTANT
1gsx
monomer4-125
1×HC4;
Assess
CRYSTAL STRUCTURE OF THE P65 CRYSTAL FORM OF PHOTOACTIVE YELLOW PROTEIN G51S MUTANT
1gsw
monomer4-125
1×HC4;
Assess
STRONG HYDROGEN BONDS IN PHOTOACTIVE YELLOW PROTEIN AND THEIR ROLE IN ITS PHOTOCYCLE
1otd
monomer21-125
2×HC4;
Assess
Photoactive yellow protein 1-25 deletion mutant
1odv
monomer26-125
1×HC4;
Assess
NMR structure of the ground state of the photoactive yellow protein lacking the N-terminal part
1xfn
monomer26-125
1×HC4;
Assess
structure of the blue shifted intermediate state of the photoactive yellow protein lacking the N-te…
1xfq
monomer26-125
1×HC4;
Assess
Solution structure of nanoFAST/HBR-DOM2 complex
8ao0
monomer28-125
1×O1F;
Assess
solution structure of nanoFAST fluorogen-activating protein in the apo state
8ao1
monomer28-125
Assess

4 SWISS-MODEL models

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
6umz.1.Amonomer0.871-125
100.00
Assess
7av6.1.Bmonomer0.7125-125
92.80
Assess
7avb.1.Amonomer0.631-125
92.80
Assess
2kx6.1.Amonomer0.531-125
1×HC4;100.00
Assess