P19387 | SWISS-MODEL Repository

P19387 (RPB3_HUMAN) Homo sapiens (Human)

DNA-directed RNA polymerase II subunit RPB3 UniProtKB InterPro STRING Interactive Modelling

275 aa; Sequence (Fasta) ; 24 identical sequences

It is possible new templates exist for this target since these models were created.

Available Structures

16 Experimental Structures

Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
Human holo-PIC in the initial transcribing state	5iy8 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15514; P13984; P18074; P19388; P19447; P20226; P23193; P24928; P29083; P29084; P30876; P35269; P36954; P52434; P52435; P52655; P52657; P53803; P61218; P62487; P62875; Q00403; Q13888; Q13889; Q6ZYL4; Q92759;	1-275	100	2×MG; 11×ZN;
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Human holo-PIC in the initial transcribing state (no IIS)	5iy9 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15514; P13984; P18074; P19388; P19447; P20226; P24928; P29083; P29084; P30876; P35269; P36954; P52434; P52435; P52655; P52657; P53803; P61218; P62487; P62875; Q00403; Q13888; Q13889; Q6ZYL4; Q92759;	1-275	100	2×MG; 10×ZN;
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Human core-PIC in the open state	5iyb PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15514; P13984; P19388; P20226; P23193; P24928; P29083; P29084; P30876; P35269; P36954; P52434; P52435; P52655; P52657; P53803; P61218; P62487; P62875; Q00403;	1-275	100	2×MG; 11×ZN;
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Human holo-PIC in the closed state	5iy6 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15514; P13984; P18074; P19388; P19447; P20226; P23193; P24928; P29083; P29084; P30876; P35269; P36954; P52434; P52435; P52655; P52657; P53803; P61218; P62487; P62875; Q00403; Q13888; Q13889; Q6ZYL4; Q92759;	1-275	100	2×MG; 11×ZN;
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Human holo-PIC in the open state	5iy7 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15514; P13984; P18074; P19388; P19447; P20226; P23193; P24928; P29083; P29084; P30876; P35269; P36954; P52434; P52435; P52655; P52657; P53803; P61218; P62487; P62875; Q00403; Q13888; Q13889; Q6ZYL4; Q92759;	1-275	100	2×MG; 11×ZN;
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Human core-PIC in the initial transcribing state	5iyc PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15514; P13984; P19388; P20226; P23193; P24928; P29083; P29084; P30876; P35269; P36954; P52434; P52435; P52655; P52657; P53803; P61218; P62487; P62875; Q00403;	1-275	100	2×MG; 11×ZN;
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Human core-PIC in the initial transcribing state (no IIS)	5iyd PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15514; P13984; P19388; P20226; P24928; P29083; P29084; P30876; P35269; P36954; P52434; P52435; P52655; P52657; P53803; P61218; P62487; P62875; Q00403;	1-275	100	2×MG; 11×ZN;
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Structure of the p53/RNA polymerase II assembly	6xre PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15514; P04637; P19388; P24928; P30876; P36954; P52434; P52435; P53803; P61218; P62487; P62875;	1-275	100	1×MG; 8×ZN;
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Human holo-PIC in the closed state	6o9l PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15514; P13984; P18074; P19388; P19447; P20226; P23193; P24928; P29083; P29084; P30876; P32780; P35269; P36954; P50613; P51946; P51948; P52434; P52435; P52655; P52657; P53803; P61218; P62487; P62875; Q00403; Q13888; Q13889; Q6ZYL4; Q92759;	1-275	100	2×MG; 17×ZN; 1×SF4;
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Human core-PIC in the closed state	5iya PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15514; P13984; P19388; P20226; P23193; P24928; P29083; P29084; P30876; P35269; P36954; P52434; P52435; P52655; P52657; P53803; P61218; P62487; P62875; Q00403;	1-275	100	2×MG; 11×ZN;
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Structure of the human Mediator-bound transcription pre-initiation complex	7lbm PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0JLT2; O15514; O43513; O60244; O75448; O75586; P13984; P18074; P19388; P19447; P20226; P24928; P29083; P29084; P30876; P32780; P35269; P36954; P50613; P51946; P51948; P52434; P52435; P52655; P52657; P53803; P61218; P62487; P62875; Q00403; Q13503; Q13888; Q13889; Q15528; Q6P2C8; Q6ZYL4; Q71SY5; Q92759; Q96G25; Q96HR3; Q96RN5; Q9BTT4; Q9BUE0; Q9H204; Q9H944; Q9NPJ6; Q9NVC6; Q9NWA0; Q9NX70; Q9P086; Q9ULK4; Q9Y2X0; Q9Y3C7;	1-271	100.0	2×MG; 16×ZN; 1×SF4;
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RNA Pol II(G)	6drd PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15514; P0CAP2; P19388; P24928; P30876; P36954; P52434; P52435; P53803; P61218; P62487; P62875;	2-271	100.0	5×ZN;
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Cryo-EM structure of Human RNA polymerase II Elongation Complex bound to the RECQL5 helicase in the…	9ei3 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15514; O94762; P19388; P24928; P30876; P36954; P52434; P52435; P53803; P61218; P62487; P62875;	2-271	100.0	8×ZN; 1×MG; 1×ANP;
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Cryo-EM structure of Human RNA polymerase II Elongation Complex bound to the RECQL5 helicase in the…	9ei4 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15514; O94762; P19388; P24928; P30876; P36954; P52434; P52435; P53803; P61218; P62487; P62875;	2-271	100.0	8×ZN; 1×MG; 1×ADP;
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Cryo-EM structure of Human RNA polymerase II Elongation Complex in an Intermediate Translocation St…	9ehz PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15514; P19388; P24928; P30876; P36954; P52434; P52435; P53803; P61218; P62487; P62875;	2-271	100.0	8×ZN; 1×MG;
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Cryo-EM structure of Human RNA polymerase II Elongation Complex bound to the RECQL5 helicase in the…	9ei1 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15514; O94762; P19388; P24928; P30876; P36954; P52434; P52435; P53803; P61218; P62487; P62875;	2-271	100.0	8×ZN; 1×MG;
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2 SWISS-MODEL models

Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
9ei3.1.C	monomer	0.83	2-271	1×ZN;	100.00
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6tye.1.E	monomer	0.51	1-262		19.91
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

P19387 (RPB3_HUMAN) Homo sapiens (Human)

DNA-directed RNA polymerase II subunit RPB3 UniProtKBInterProSTRINGInteractive Modelling

Available Structures

16 Experimental Structures

2 SWISS-MODEL models

Alignments

Background

Resolution

DNA-directed RNA polymerase II subunit RPB3 UniProtKB InterPro STRING Interactive Modelling