P36594 (RPB1_SCHPO) Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
DNA-directed RNA polymerase II subunit rpb1 UniProtKBInterProSTRINGInteractive Modelling
1752 aa; Sequence (Fasta)
No models could be built to increase the coverage beyond existing experimental structures for this target sequence.
Sequence Features
| 69 | Zinc 1 | ||
| 72 | Zinc 1 | ||
| 79 | Zinc 1 | ||
| 82 | Zinc 1 | ||
| 109 | Zinc 2 | ||
| 112 | Zinc 2 | ||
| 150 | Zinc 2 | ||
| 175 | Zinc 2 | ||
| 487 | Magnesium 1; catalytic | ||
| 487 | Magnesium 2; shared with RPB2 | ||
| 489 | Magnesium 1; catalytic | ||
| 489 | Magnesium 2; shared with RPB2 | ||
| 491 | Magnesium 1; catalytic | ||
| 14-346 | RNA polymerase Rpb1, domain 1 IPR007080PF04997 | ||
| 348-513 | RNA polymerase, alpha subunit IPR000722PF00623 | ||
| 516-675 | RNA polymerase Rpb1, domain 3 IPR007066PF04983 | ||
| 701-806 | RNA polymerase Rpb1, domain 4 IPR007083PF05000 | ||
| 813-1402 | RNA polymerase Rpb1, domain 5 IPR007081PF04998 | ||
| 879-1059 | RNA polymerase Rpb1, domain 6 IPR007075PF04992 | ||
| 1144-1280 | RNA polymerase Rpb1, domain 7 IPR007073PF04990 | ||
| 1579-1592 | RNA polymerase II, heptapeptide repeat, eukaryotic IPR000684PF05001 | ||
| 1593-1606 | RNA polymerase II, heptapeptide repeat, eukaryotic IPR000684PF05001 | ||
| 1607-1620 | RNA polymerase II, heptapeptide repeat, eukaryotic IPR000684PF05001 | ||
| 1621-1634 | RNA polymerase II, heptapeptide repeat, eukaryotic IPR000684PF05001 | ||
| 1628-1641 | RNA polymerase II, heptapeptide repeat, eukaryotic IPR000684PF05001 | ||
| 1635-1648 | RNA polymerase II, heptapeptide repeat, eukaryotic IPR000684PF05001 | ||
| 1642-1655 | RNA polymerase II, heptapeptide repeat, eukaryotic IPR000684PF05001 | ||
| 1649-1662 | RNA polymerase II, heptapeptide repeat, eukaryotic IPR000684PF05001 | ||
| 1656-1669 | RNA polymerase II, heptapeptide repeat, eukaryotic IPR000684PF05001 | ||
| 1663-1676 | RNA polymerase II, heptapeptide repeat, eukaryotic IPR000684PF05001 | ||
| 1670-1683 | RNA polymerase II, heptapeptide repeat, eukaryotic IPR000684PF05001 | ||
| 1677-1690 | RNA polymerase II, heptapeptide repeat, eukaryotic IPR000684PF05001 | ||
| 1684-1697 | RNA polymerase II, heptapeptide repeat, eukaryotic IPR000684PF05001 | ||
| 1691-1704 | RNA polymerase II, heptapeptide repeat, eukaryotic IPR000684PF05001 | ||
| 1698-1711 | RNA polymerase II, heptapeptide repeat, eukaryotic IPR000684PF05001 | ||
| 1705-1718 | RNA polymerase II, heptapeptide repeat, eukaryotic IPR000684PF05001 | ||
| 1712-1725 | RNA polymerase II, heptapeptide repeat, eukaryotic IPR000684PF05001 | ||
| 1726-1739 | RNA polymerase II, heptapeptide repeat, eukaryotic IPR000684PF05001 | ||
| 1740-1752 | RNA polymerase II, heptapeptide repeat, eukaryotic IPR000684PF05001 |
Sequence Alignments
Experimental structures
| Description | Oligo-state | Ligands | Structure | Range | Download | Assess |
|---|---|---|---|---|---|---|
| RNA Polymerase II from Schizosaccharomyces pombe |
Heteromer O13877; O14459; O74635; O74825; P36595; P37382; P48011; P87123; Q02061; Q09191; Q92399; | 8×ZN; 1×MG; | 3h0g | |||
| Cryo-EM structure of the Mediator-RNAPII complex |
Heteromer O13877; O13964; O14010; O14198; O14459; O60104; O74635; O74825; O94376; O94646; P36595; P37382; P48011; P87123; P87306; Q02061; Q09191; Q10317; Q10477; Q92399; Q9P6Q0; Q9P7Y4; Q9US45; Q9USH1; | 5u0s | ||||
| PCE1 guanylyltransferase bound to SER2/SER5 phosphorylated RNA pol II CTD |
Heteromer P40997; | 1×GMP; | 4pz6 |