P38912 | SWISS-MODEL Repository

P38912 (IF1A_YEAST) Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)

Eukaryotic translation initiation factor 1A UniProtKB InterPro STRING Interactive Modelling

153 aa; Sequence (Fasta) ; 9 identical sequences: Saccharomyces cerevisiae: N1P5Y1, G2WKW8, C8ZFC6, C7GR92, A6ZMX5, B3LME7; Saccharomyces pastorianus: A0A6C1DYF1; Saccharomyces paradoxus: A0A8B8UXS3; Saccharomyces mikatae IFO 1815: A0AA35NF27

It is possible new templates exist for this target since these models were created.

Available Structures

22 Experimental Structures

Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C2)	6fyy PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A6ZMK5; A6ZZ25; F2Z602; P06103; P09064; P0CX86; P20459; P27069; P32481; P32497; P33285; P38249; P38431; P69061; Q6CIM1; Q6CJK0; Q6CKL3; Q6CKV4; Q6CLU4; Q6CM04; Q6CM18; Q6CMG3; Q6CN12; Q6CNI7; Q6CNL2; Q6CPG3; Q6CRA3; Q6CRK7; Q6CS01; Q6CTD6; Q6CU44; Q6CUH5; Q6CVZ5; Q6CW21; Q6CW78; Q6CWD0; Q6CWJ2; Q6CWT9; Q6CWU3; Q6CX80; Q6CXM0; Q6CXT6; Q875N2;	2-122	100	117×MG; 5×ZN; 1×MET; 1×GCP;
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Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C1)	6fyx PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A6ZZ25; F2Z602; P06103; P09064; P0CX86; P20459; P27069; P32481; P32497; P33285; P38249; P38431; P40217; P69061; Q6CIM1; Q6CJK0; Q6CKL3; Q6CKV4; Q6CLU4; Q6CM04; Q6CM18; Q6CMG3; Q6CN12; Q6CNI7; Q6CNL2; Q6CPG3; Q6CRA3; Q6CRK7; Q6CS01; Q6CTD6; Q6CU44; Q6CUH5; Q6CVZ5; Q6CW21; Q6CW78; Q6CWD0; Q6CWJ2; Q6CWT9; Q6CWU3; Q6CX80; Q6CXM0; Q6CXT6; Q875N2;	2-122	100	117×MG; 5×ZN; 1×MET; 1×GCP;
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Structure of a partial yeast 48S preinitiation complex in closed conformation	6gsn PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A6ZZ25; P06103; P09064; P0CX86; P20459; P27069; P32481; P32497; P32911; P33285; P38249; P40217; P69061; Q6CIM1; Q6CJK0; Q6CKL3; Q6CKV4; Q6CLU4; Q6CM04; Q6CM18; Q6CMG3; Q6CN12; Q6CNI7; Q6CNL2; Q6CPG3; Q6CRA3; Q6CRK7; Q6CS01; Q6CTD6; Q6CU44; Q6CUH5; Q6CVZ5; Q6CW21; Q6CW78; Q6CWD0; Q6CWJ2; Q6CWT9; Q6CWU3; Q6CX80; Q6CXM0; Q6CXT6; Q875M3; Q875N2;	5-115	100	81×MG; 4×ZN; 1×GCP; 1×MET;
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Structure of a partial yeast 48S preinitiation complex in closed conformation	3jap PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A6ZZ25; F2Z602; P06103; P09064; P0CX86; P20459; P27069; P32481; P32497; P32911; P33285; P38249; P40217; P69061; Q6CIM1; Q6CJK0; Q6CKL3; Q6CKV4; Q6CLU4; Q6CM04; Q6CM18; Q6CMG3; Q6CN12; Q6CNI7; Q6CNL2; Q6CPG3; Q6CRA3; Q6CRK7; Q6CS01; Q6CTD6; Q6CU44; Q6CUH5; Q6CVZ5; Q6CW21; Q6CW78; Q6CWD0; Q6CWJ2; Q6CWT9; Q6CWU3; Q6CX80; Q6CXM0; Q6CXT6; Q875N2;	5-115	100	81×MG; 4×ZN; 1×MET; 1×GCP;
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CryoEM structure of a partial yeast 48S preinitiation complex	3j81 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer F2Z602; P09064; P0CX86; P20459; P27069; P32481; P32911; P33285; P69061; Q6CIM1; Q6CJK0; Q6CKL3; Q6CKV4; Q6CLU4; Q6CM04; Q6CM18; Q6CMG3; Q6CN12; Q6CNI7; Q6CNL2; Q6CPG3; Q6CRA3; Q6CRK7; Q6CS01; Q6CTD6; Q6CU44; Q6CUH5; Q6CVZ5; Q6CW21; Q6CW78; Q6CWD0; Q6CWJ2; Q6CWT9; Q6CWU3; Q6CX80; Q6CXM0; Q6CXT6; Q875N2;	5-115	100	81×MG; 3×ZN; 1×MET;
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Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model py48S-AUC-2)	8s8d PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer F2Z602; P09064; P20459; P27069; P32481; P33285; P69061; Q6CIM1; Q6CJK0; Q6CKL3; Q6CKV4; Q6CLU4; Q6CM04; Q6CM18; Q6CMG3; Q6CN12; Q6CNI7; Q6CNL2; Q6CPG3; Q6CRA3; Q6CRK7; Q6CS01; Q6CTD6; Q6CU44; Q6CUH5; Q6CVZ5; Q6CW21; Q6CW78; Q6CWD0; Q6CWJ2; Q6CWT9; Q6CWU3; Q6CX80; Q6CXM0; Q6CXT6; Q875N2;	8-117	100	116×MG; 3×ZN; 1×GCP; 1×MET;
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Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model py48S-AUC-3.1)	8s8e PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer F2Z602; P09064; P20459; P27069; P32481; P32497; P33285; P38249; P69061; Q6CIM1; Q6CJK0; Q6CKL3; Q6CKV4; Q6CLU4; Q6CM04; Q6CM18; Q6CMG3; Q6CN12; Q6CNI7; Q6CNL2; Q6CPG3; Q6CRA3; Q6CRK7; Q6CS01; Q6CTD6; Q6CU44; Q6CUH5; Q6CVZ5; Q6CW21; Q6CW78; Q6CWD0; Q6CWJ2; Q6CWT9; Q6CWU3; Q6CX80; Q6CXM0; Q6CXT6; Q875N2;	11-117	100.0	116×MG; 3×ZN; 1×GCP; 1×MET;
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Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model py48S-AUC-2.1)	8s8g PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer F2Z602; P09064; P20459; P27069; P32481; P33285; P69061; Q6CIM1; Q6CJK0; Q6CKL3; Q6CKV4; Q6CLU4; Q6CM04; Q6CM18; Q6CMG3; Q6CN12; Q6CNI7; Q6CNL2; Q6CPG3; Q6CRA3; Q6CRK7; Q6CS01; Q6CTD6; Q6CU44; Q6CUH5; Q6CVZ5; Q6CW21; Q6CW78; Q6CWD0; Q6CWJ2; Q6CWT9; Q6CWU3; Q6CX80; Q6CXM0; Q6CXT6; Q875N2;	11-117	100.0	116×MG; 3×ZN; 1×GCP; 1×MET;
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Cryo-EM structure of native Otu2-bound ubiquitinated 48S initiation complex (partial)	8cas PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O13516; P02407; P05750; P05756; P05759; P06103; P06367; P07280; P09064; P0C0V8; P0C0W1; P0CH08; P0CX29; P0CX31; P0CX33; P0CX36; P0CX38; P0CX39; P0CX47; P0CX51; P0CX55; P0CX86; P20459; P25443; P26783; P26786; P32481; P32497; P32905; P33442; P35997; P38011; P38249; P38431; P38701; P38747; P39938; P40217; P41057; P48589; Q01855; Q03195; Q04067; Q08745; Q3E792; Q3E7X9;	19-122	100.0	4×ZN; 1×ADP; 5×MG; 1×ATP; 2×SF4; 1×MET; 1×GCP;
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Structure of a yeast ABCE1-bound 48S initiation complex	6zu9 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O13516; P02407; P05750; P05756; P05759; P06103; P06367; P07280; P0C0V8; P0C0W1; P0C0X0; P0CX29; P0CX31; P0CX33; P0CX35; P0CX37; P0CX39; P0CX47; P0CX51; P0CX55; P25443; P26783; P26786; P32497; P32905; P33442; P35997; P38011; P38249; P38431; P38701; P39938; P40217; P41057; P48589; Q01855; Q03195; Q04067; Q08745; Q3E792;	19-122	100.0	4×MG; 3×ZN; 1×ADP; 1×ATP; 2×SF4;
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Structure of a yeast ABCE1-bound 43S pre-initiation complex	6zce PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O13516; P02407; P05750; P05756; P05759; P06103; P06367; P07280; P0C0V8; P0C0W1; P0C0X0; P0CX29; P0CX31; P0CX33; P0CX35; P0CX37; P0CX39; P0CX47; P0CX51; P0CX55; P25443; P26783; P26786; P32497; P32905; P32911; P33442; P35997; P38011; P38249; P38701; P39938; P40217; P41057; P48589; Q01855; Q03195; Q04067; Q05775; Q08745; Q3E792;	19-115	100	4×ZN; 1×ADP; 2×MG; 1×ATP; 2×SF4;
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Cryo-EM structure of native Otu2-bound ubiquitinated 43S pre-initiation complex	8cah PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O13516; P02407; P05750; P05756; P05759; P06103; P06367; P07280; P0C0V8; P0C0W1; P0CH08; P0CX29; P0CX31; P0CX33; P0CX36; P0CX38; P0CX39; P0CX47; P0CX51; P0CX55; P0CX86; P25443; P26783; P26786; P32497; P32905; P32911; P33442; P35997; P38011; P38249; P38701; P38747; P39938; P40217; P41057; P48589; Q01855; Q03195; Q04067; Q05775; Q08745; Q3E792; Q3E7X9;	19-115	100	80×MG; 2×ZN; 2×SF4; 1×ADP;
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Structure of a yeast 48S-AUC preinitiation complex in swivelled conformation (model py48S-AUC-swiv-…	8s8k PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer F2Z602; P09064; P20459; P27069; P32481; P32497; P32911; P33285; P69061; Q6CIM1; Q6CJK0; Q6CKL3; Q6CKV4; Q6CLU4; Q6CM04; Q6CM18; Q6CMG3; Q6CN12; Q6CNI7; Q6CNL2; Q6CPG3; Q6CRA3; Q6CRK7; Q6CS01; Q6CTD6; Q6CU44; Q6CUH5; Q6CVZ5; Q6CW21; Q6CW78; Q6CWD0; Q6CWJ2; Q6CWT9; Q6CWU3; Q6CX80; Q6CXM0; Q6CXT6; Q875N2;	23-118	100	96×MG; 4×ZN; 1×GCP; 1×MET;
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CryoEM structure of 40S-eIF1A-eIF1 complex from yeast	3jam PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer F2Z602; P0CX86; P27069; P32911; P33285; P69061; Q6CIM1; Q6CJK0; Q6CKL3; Q6CKV4; Q6CLU4; Q6CM04; Q6CM18; Q6CMG3; Q6CN12; Q6CNI7; Q6CNL2; Q6CPG3; Q6CRA3; Q6CRK7; Q6CS01; Q6CTD6; Q6CU44; Q6CUH5; Q6CVZ5; Q6CW21; Q6CW78; Q6CWD0; Q6CWJ2; Q6CWT9; Q6CWU3; Q6CX80; Q6CXM0; Q6CXT6; Q875N2;	22-117	100	80×MG; 3×ZN;
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CryoEM structure of 40S-eIF1-eIF1A preinitiation complex	3j80 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer F2Z602; P0CX86; P27069; P32911; P33285; P69061; Q6CIM1; Q6CJK0; Q6CKL3; Q6CKV4; Q6CLU4; Q6CM04; Q6CM18; Q6CMG3; Q6CN12; Q6CNI7; Q6CNL2; Q6CPG3; Q6CRA3; Q6CRK7; Q6CS01; Q6CTD6; Q6CU44; Q6CUH5; Q6CVZ5; Q6CW21; Q6CW78; Q6CWD0; Q6CWJ2; Q6CWT9; Q6CWU3; Q6CX80; Q6CXM0; Q6CXT6; Q875N2;	22-117	100	67×MG; 3×ZN;
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Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model py48S-AUC-3.2)	8s8f PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer F2Z602; P09064; P20459; P27069; P32481; P32911; P33285; P69061; Q6CIM1; Q6CJK0; Q6CKL3; Q6CKV4; Q6CLU4; Q6CM04; Q6CM18; Q6CMG3; Q6CN12; Q6CNI7; Q6CNL2; Q6CPG3; Q6CRA3; Q6CRK7; Q6CS01; Q6CTD6; Q6CU44; Q6CUH5; Q6CVZ5; Q6CW21; Q6CW78; Q6CWD0; Q6CWJ2; Q6CWT9; Q6CWU3; Q6CX80; Q6CXM0; Q6CXT6; Q875N2;	23-117	100	116×MG; 4×ZN; 1×GCP; 1×MET;
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Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model py48S-AUC-2.2)	8s8h PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer F2Z602; P09064; P20459; P27069; P32481; P33285; P69061; Q6CIM1; Q6CJK0; Q6CKL3; Q6CKV4; Q6CLU4; Q6CM04; Q6CM18; Q6CMG3; Q6CN12; Q6CNI7; Q6CNL2; Q6CPG3; Q6CRA3; Q6CRK7; Q6CS01; Q6CTD6; Q6CU44; Q6CUH5; Q6CVZ5; Q6CW21; Q6CW78; Q6CWD0; Q6CWJ2; Q6CWT9; Q6CWU3; Q6CX80; Q6CXM0; Q6CXT6; Q875N2;	23-117	100	116×MG; 3×ZN; 1×GCP; 1×MET;
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Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model py48S-AUC-eIF1)	8s8i PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer F2Z602; P09064; P20459; P27069; P32481; P32911; P33285; P69061; Q6CIM1; Q6CJK0; Q6CKL3; Q6CKV4; Q6CLU4; Q6CM04; Q6CM18; Q6CMG3; Q6CN12; Q6CNI7; Q6CNL2; Q6CPG3; Q6CRA3; Q6CRK7; Q6CS01; Q6CTD6; Q6CU44; Q6CUH5; Q6CVZ5; Q6CW21; Q6CW78; Q6CWD0; Q6CWJ2; Q6CWT9; Q6CWU3; Q6CX80; Q6CXM0; Q6CXT6; Q875N2;	23-117	100	117×MG; 4×ZN; 1×GCP; 1×MET;
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Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model py48S-AUC-eIF5)	8s8j PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer F2Z602; P09064; P20459; P27069; P32481; P33285; P38431; P69061; Q6CIM1; Q6CJK0; Q6CKL3; Q6CKV4; Q6CLU4; Q6CM04; Q6CM18; Q6CMG3; Q6CN12; Q6CNI7; Q6CNL2; Q6CPG3; Q6CRA3; Q6CRK7; Q6CS01; Q6CTD6; Q6CU44; Q6CUH5; Q6CVZ5; Q6CW21; Q6CW78; Q6CWD0; Q6CWJ2; Q6CWT9; Q6CWU3; Q6CX80; Q6CXM0; Q6CXT6; Q875N2;	23-117	100	115×MG; 4×ZN; 1×MET; 1×GCP;
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Structure of a yeast 48S-AUC preinitiation complex in closed conformation	8rw1 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer F2Z602; P09064; P20459; P27069; P32481; P33285; P69061; Q6CIM1; Q6CJK0; Q6CKL3; Q6CKV4; Q6CLU4; Q6CM04; Q6CM18; Q6CMG3; Q6CN12; Q6CNI7; Q6CNL2; Q6CPG3; Q6CRA3; Q6CRK7; Q6CS01; Q6CTD6; Q6CU44; Q6CUH5; Q6CVZ5; Q6CW21; Q6CW78; Q6CWD0; Q6CWJ2; Q6CWT9; Q6CWU3; Q6CX80; Q6CXM0; Q6CXT6; Q875N2;	23-117	100	115×MG; 3×ZN; 1×GCP; 1×MET;
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Structure of a partial yeast 48S preinitiation complex in open conformation.	6gsm PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer F2Z602; P06103; P09064; P0CX86; P20459; P27069; P32481; P32497; P32911; P33285; P38249; P40217; P69061; Q04067; Q6CIM1; Q6CJK0; Q6CKL3; Q6CKV4; Q6CLU4; Q6CM04; Q6CM18; Q6CMG3; Q6CN12; Q6CNI7; Q6CNL2; Q6CPG3; Q6CRA3; Q6CRK7; Q6CS01; Q6CTD6; Q6CU44; Q6CUH5; Q6CVZ5; Q6CW21; Q6CW78; Q6CWD0; Q6CWJ2; Q6CWT9; Q6CWU3; Q6CX80; Q6CXM0; Q6CXT6; Q875N2;	21-115	100	1×7NO; 82×MG; 4×ZN; 1×GCP;
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crystal structure analysis of eukaryotic translation initiation factor 5B and 1A complex	3wbk PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P39730;	143-153	100
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1 SWISS-MODEL model

	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	6fyy.1.b	monomer	0.66	2-122		100.00
	Download ModelCIF format PDB format Model report Compare Structure Assessment

	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

P38912 (IF1A_YEAST) Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)

Eukaryotic translation initiation factor 1A UniProtKBInterProSTRINGInteractive Modelling

Available Structures

22 Experimental Structures

1 SWISS-MODEL model

Alignments

Background

Resolution

Eukaryotic translation initiation factor 1A UniProtKB InterPro STRING Interactive Modelling