P40089 (LSM5_YEAST) Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
U6 snRNA-associated Sm-like protein LSm5 UniProtKBInterProSTRINGInteractive Modelling
93 aa; Sequence (Fasta) ;
9 identical sequences: Saccharomyces cerevisiae: N1P5D1, G2WD33, C8Z7G7, C7GQ50, A0A6A5PXE6, A6ZRA3, B3LRQ9; Saccharomyces pastorianus: A0A6C1DRN0; Saccharomyces boulardii: A0A0L8VRI2
It is possible new templates exist for this target since these models were created.
Available Structures
14 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Ligands | ||
|---|---|---|---|---|---|---|
| Structure of yeast U6 snRNP with 2'-phosphate terminated U6 RNA |
Heteromer P38203; P40070; P47093; P49960; P53905; P57743; Q06406; | |||||
| Assess | ||||||
| Crystal structure of the yeast Lsm1-7 complex |
Heteromer P38203; P40070; P47017; P53905; P57743; Q06406; | |||||
| Assess | ||||||
| Crystal structure of the yeast Lsm1-7-Pat1 complex |
Heteromer P25644; P38203; P40070; P47017; P53905; P57743; Q06406; | 2×CO; | ||||
| Assess | ||||||
| Crystal structure of Lsm2-8 complex bound to the RNA fragment CGUUU |
Heteromer P38203; P40070; P47093; P53905; P57743; Q06406; | |||||
| Assess | ||||||
| Cryo-EM structure of the spliceosomal U4/U6.U5 tri-snRNP |
Heteromer P19735; P20053; P32639; P33334; P36048; P38203; P39990; P40018; P40070; P40204; P43321; P47093; P49704; P53905; P54999; P57743; Q02260; Q03338; Q06217; Q06406; Q06819; Q12330; | 1×GTP; 1×M7M; | ||||
| Assess | ||||||
| Cryo-EM structure of the yeast pre-B complex at an average resolution of 3.4~4.6 angstrom (tri-snRN… |
Heteromer P0C074; P19735; P19736; P20053; P32524; P32639; P33334; P36048; P38203; P39990; P40018; P40070; P40204; P40565; P40567; P43321; P46947; P47093; P49704; P49955; P53905; P54999; P57743; Q02260; Q02554; Q03338; Q04693; Q06217; Q06406; Q06819; Q06835; Q07350; Q07930; Q08963; Q12330; Q12420; Q99181; | 1×GTP; 1×MG; 6×ZN; | ||||
| Assess | ||||||
| Cryo-EM structure of the yeast B complex at average resolution of 3.9 angstrom |
Heteromer P0C074; P19735; P19736; P20053; P32524; P32639; P33334; P36048; P38203; P38282; P39990; P40018; P40070; P40204; P40565; P40567; P43321; P46947; P47093; P49704; P49955; P53905; P54999; P57743; Q00723; Q02260; Q02554; Q03338; Q04693; Q06217; Q06406; Q06819; Q06835; Q07350; Q07930; Q08963; Q12330; Q12368; Q12420; Q99181; | 1×GTP; 1×MG; | ||||
| Assess | ||||||
| Structure of a pre-catalytic spliceosome. |
Heteromer A6ZYX7; P0C074; P19735; P19736; P20053; P32524; P32639; P33334; P36048; P38203; P38282; P39990; P40018; P40070; P40204; P40567; P43321; P47093; P49704; P49955; P53905; P54999; P57743; Q00723; Q02260; Q02554; Q03338; Q04693; Q06217; Q06819; Q06835; Q07350; Q08963; Q12330; Q12368; Q12420; Q99181; | 1×GTP; 7×ZN; | ||||
| Assess | ||||||
| The overall structure of the yeast spliceosomal U4/U6.U5 tri-snRNP at 3.7 Angstrom |
Heteromer P19735; P20053; P32639; P33334; P36048; P38203; P39990; P40018; P40070; P40204; P43321; P47093; P49704; P53905; P54999; P57743; Q02260; Q03338; Q06217; Q06406; Q06819; Q12330; Q12420; | 1×GTP; | ||||
| Assess | ||||||
| Crystal structure of Lsm2-8 complex, space group I212121 |
Heteromer P38203; P40070; P47093; P53905; P57743; Q06406; | |||||
| Assess | ||||||
| Structure of yeast U6 snRNP with 3'-phosphate terminated U6 RNA |
Heteromer A6ZYX7; P38203; P40070; P47093; P49960; P53905; P57743; | 2×K; 1×MN; 2×MG; | ||||
| Assess | ||||||
| Crystal structure of Lsm2-8 complex bound to the 3' end sequence of U6 snRNA |
Heteromer P38203; P40070; P47093; P53905; P57743; Q06406; | |||||
| Assess | ||||||
| Crystal structure of Lsm2-8 complex, space group P21 |
Heteromer P38203; P40070; P47093; P53905; P57743; Q06406; | |||||
| Assess | ||||||
| Crystal structure of Lsm1-7 complex |
Heteromer P38203; P40070; P47017; P53905; P57743; Q06406; | 2×CL; | ||||
| Assess | ||||||
1 SWISS-MODEL model
| Template | Oligo-state | QMEANDisCo | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 5vsu.1.E | monomer | 0.85 | 100.00 | |||
| Assess | ||||||