P40339 (RFC4_YEAST) Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Replication factor C subunit 4 UniProtKBInterProSTRINGInteractive Modelling
It is possible new templates exist for this target since these models were created.
However, an attempt to improve models for this target was made on 2025-05-08. The outcome - failed for technical reasons.
Available Structures
44 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Seq id (%) | Ligands | |
|---|---|---|---|---|---|---|
| Atomic model of the S. cerevisiae clamp-clamp loader complex PCNA-RFC bound to two DNA molecules, o… |
Heteromer P15873; P38251; P38629; P38630; P40348; | 100 | 4×AGS; 4×MG; 1×ADP; | |||
| Atomic model of the S. cerevisiae clamp-clamp loader complex PCNA-RFC bound to DNA with an open cla… |
Heteromer P15873; P38251; P38629; P38630; P40348; | 100 | 4×AGS; 4×MG; 1×ADP; | |||
| Atomic model of S. cerevisiae clamp-clamp loader complex PCNA-RFC bound to DNA with a closed clamp … |
Heteromer P15873; P38251; P38629; P38630; P40348; | 100 | 4×AGS; 4×MG; 1×ADP; | |||
| Structure of S. cerevisiae Rad24-RFC loading the 9-1-1 clamp onto a 5-nt gapped DNA (9-1-1 encircli… |
Heteromer P32641; P38251; P38629; P40348; P48581; Q02574; Q08949; | 100 | 4×AGS; 4×MG; 1×ADP; | |||
| Structure of S. cerevisiae Rad24-RFC loading the 9-1-1 clamp onto a 10-nt gapped DNA in step 4 (par… |
Heteromer P32641; P38251; P38629; P40348; P48581; Q02574; Q08949; | 100 | 4×AGS; 4×MG; 1×ADP; | |||
| Structure of the yeast clamp loader (Replication Factor C RFC) bound to the sliding clamp (Prolifer… |
Heteromer P15873; P38251; P38629; P38630; P40348; | 100 | 4×AGS; 4×MG; 1×ADP; | |||
| Atomic model of S. cerevisiae clamp loader RFC bound to two DNA molecules, one at the 5'-recessed e… |
Heteromer P38251; P38629; P38630; P40348; | 100 | 4×AGS; 4×MG; 1×ADP; | |||
| Atomic model of S. cerevisiae clamp loader RFC bound to DNA |
Heteromer P38251; P38629; P38630; P40348; | 100 | 4×AGS; 4×MG; 1×ADP; | |||
| RFC:PCNA bound to DNA with a ssDNA gap of five nucleotides |
Heteromer P15873; P38251; P38629; P38630; P40348; | 100 | 3×AGS; 4×MG; 2×ADP; | |||
| Structure of S. cerevisiae Rad24-RFC loading the 9-1-1 clamp onto a 10-nt gapped DNA in step 5 (clo… |
Heteromer P32641; P38251; P38629; P40348; P48581; Q02574; Q08949; | 100 | 4×MG; 4×AGS; 1×ADP; | |||
| Structure of S. cerevisiae Rad24-RFC loading the 9-1-1 clamp onto a 10-nt gapped DNA in step 1 (ope… |
Heteromer P32641; P38251; P38629; P40348; P48581; Q02574; Q08949; | 100 | 4×MG; 4×AGS; 1×ADP; | |||
| Cryo-EM structure of S. cerevisiae Ctf18-RFC-PCNA complex in Apo state conformation I |
Heteromer P15873; P38251; P38629; P40348; P49956; | 100 | 3×AGS; 3×MG; 1×ADP; | |||
| RFC:PCNA bound to nicked DNA |
Heteromer P15873; P38251; P38629; P38630; P40348; | 100 | 4×AGS; 4×MG; 1×ADP; | |||
| RFC:PCNA bound to dsDNA with a ssDNA gap of six nucleotides |
Heteromer P15873; P38251; P38629; P38630; P40348; | 100 | 3×AGS; 4×MG; 2×ADP; | |||
| Cryo-EM structure of S. cerevisiae Ctf18-RFC-PCNA-PolE-DNA complex |
Heteromer P15873; P21951; P25559; P38251; P38629; P38877; P40348; P49956; | 100 | 1×SF4; 3×AGS; 3×MG; 1×ADP; | |||
| Structure of the yeast clamp loader (Replication Factor C RFC) bound to the open sliding clamp (Pro… |
Heteromer P15873; P38251; P38629; P38630; P40348; | 100 | 4×AGS; 4×MG; 1×ADP; | |||
| Cryo-EM structure of S. cerevisiae Ctf18-RFC-PCNA-DNA complex |
Heteromer P15873; P38251; P38629; P40348; P49956; | 100 | 3×AGS; 3×MG; 1×ADP; | |||
| Closed state of RFC:PCNA bound to a nicked dsDNA |
Heteromer P15873; P38251; P38629; P38630; P40348; | 100 | 4×AGS; 4×MG; 1×ADP; | |||
| Closed state of RFC:PCNA bound to a 3' ss/dsDNA junction |
Heteromer P15873; P38251; P38629; P38630; P40348; | 100 | 4×AGS; 4×MG; 1×GDP; | |||
| Structure of the Saccharomyces cerevisiae clamp unloader Elg1-RFC bound to PCNA |
Heteromer P15873; P38251; P38629; P40348; Q12050; | 100 | 4×AGS; 3×MG; 1×ADP; | |||
| Structure of the yeast clamp loader (Replication Factor C RFC) bound to the open sliding clamp (Pro… |
Heteromer P15873; P38251; P38629; P38630; P40348; | 100 | 4×AGS; 4×MG; 1×ADP; | |||
| Intermediate state of RFC:PCNA bound to a 3' ss/dsDNA junction |
Heteromer P15873; P38251; P38629; P38630; P40348; | 100 | 4×AGS; 4×MG; 1×GDP; | |||
| Closed state of RFC:PCNA bound to a 3' ss/dsDNA junction (DNA2) with NTD |
Heteromer P15873; P38251; P38629; P38630; P40348; | 100 | 4×AGS; 4×MG; 1×GDP; | |||
| Open state of RFC:PCNA bound to a 3' ss/dsDNA junction (DNA2) without NTD |
Heteromer P15873; P38251; P38629; P38630; P40348; | 100 | 4×AGS; 4×MG; 1×GDP; | |||
| Open state of RFC:PCNA bound to a nicked dsDNA |
Heteromer P15873; P38251; P38629; P38630; P40348; | 100 | 4×AGS; 4×MG; 1×GDP; | |||
| Consensus closed state of RFC:PCNA bound to a 3' ss/dsDNA junction (DNA2) |
Heteromer P15873; P38251; P38629; P38630; P40348; | 100 | 4×AGS; 4×MG; 1×GDP; | |||
| Open state of RFC:PCNA bound to a 3' ss/dsDNA junction (DNA2) with NTD |
Heteromer P15873; P38251; P38629; P38630; P40348; | 100 | 4×MG; 4×AGS; 1×GDP; | |||
| Structure of the yeast clamp loader (Replication Factor C RFC) bound to the open sliding clamp (Pro… |
Heteromer P15873; P38251; P38629; P38630; P40348; | 100 | 4×AGS; 4×MG; 1×ADP; | |||
| Structure of the Saccharomyces cerevisiae PCNA clamp unloader Elg1-RFC complex |
Heteromer P38251; P38629; P40348; Q12050; | 100 | 4×AGS; 3×MG; 1×ADP; | |||
| Structure of the Saccharomyces cerevisiae clamp unloader Elg1-RFC bound to a cracked PCNA |
Heteromer P15873; P38251; P38629; P40348; Q12050; | 100 | 4×AGS; 3×MG; 1×ADP; | |||
| Structure of the yeast Rad24-RFC loader bound to DNA and the closed 9-1-1 clamp |
Heteromer P32641; P38251; P38629; P40348; P48581; Q02574; Q08949; | 100 | 4×AGS; 4×MG; 1×ADP; 1×PO4; | |||
| Structure of S. cerevisiae Rad24-RFC loading the 9-1-1 clamp onto a 10-nt gapped DNA in step 2 (ope… |
Heteromer P32641; P38251; P38629; P40348; P48581; Q02574; Q08949; | 100.0 | 4×AGS; 4×MG; 1×ADP; | |||
| Structure of the yeast Rad24-RFC loader bound to DNA and the open 9-1-1 clamp |
Heteromer P32641; P38251; P38629; P40348; P48581; Q02574; Q08949; | 100 | 4×AGS; 4×MG; 1×ADP; | |||
| Structure of S. cerevisiae Rad24-RFC loading the 9-1-1 clamp onto a 10-nt gapped DNA in step 3 (ope… |
Heteromer P32641; P38251; P38629; P40348; P48581; Q02574; Q08949; | 100 | 4×AGS; 4×MG; 1×ADP; | |||
| Crystal Structure of the Eukaryotic Clamp Loader (Replication Factor C, RFC) Bound to the DNA Slidi… |
Heteromer P15873; P38251; P38629; P38630; P40348; | 99.68 | 4×MG; 4×AGS; 1×ADP; | |||
| Rad24-RFC ADP state |
Heteromer P32641; P38251; P38629; P40348; | 100 | 4×ADP; 1×ATP; 1×MG; | |||
| Structure of the yeast clamp loader (Replication Factor C RFC) bound to the sliding clamp (Prolifer… |
Heteromer P15873; P38251; P38629; P38630; P40348; | 100 | 4×AGS; 4×MG; 1×ADP; | |||
| Open state of Rad24-RFC:9-1-1 bound to a 5' ss/dsDNA junction |
Heteromer P32641; P38251; P38629; P40348; P48581; Q02574; Q08949; | 100 | 4×MG; 4×AGS; 1×GDP; | |||
| Open state of RFC:PCNA bound to a 3' ss/dsDNA junction |
Heteromer P15873; P38251; P38629; P38630; P40348; | 100 | 4×AGS; 4×MG; 1×GDP; | |||
| Cryo-EM structure of S. cerevisiae Ctf18-RFC-PCNA complex in Apo state conformation I |
Heteromer P15873; P38251; P38629; P40348; P49956; | 100 | 1×ADP; 3×AGS; 3×MG; | |||
| Open state of Rad24-RFC:9-1-1 bound to a 5' ss/dsDNA junction |
Heteromer P32641; P38251; P38629; P40348; P48581; Q02574; Q08949; | 100 | 4×AGS; 4×MG; 1×GLU; 1×THR; 1×ADP; | |||
| Closed state of Rad24-RFC:9-1-1 bound to a 5' ss/dsDNA junction |
Heteromer P32641; P38251; P38629; P40348; P48581; Q02574; Q08949; | 100 | 4×AGS; 4×MG; 1×ADP; | |||
| Structure of the yeast clamp loader (Replication Factor C RFC) bound to the sliding clamp (Prolifer… |
Heteromer P15873; P38251; P38629; P38630; P40348; | 100 | 4×AGS; 4×MG; 1×ADP; | |||
| Structure of the yeast clamp loader (Replication Factor C RFC) bound to the sliding clamp (Prolifer… |
Heteromer P15873; P38251; P38629; P38630; P40348; | 100 | 4×AGS; 4×MG; 1×ADP; | |||
3 SWISS-MODEL models
| Template | Oligo-state | QMEAN | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 8dr3.1.B | monomer | 0.89 | 100.00 | |||
| 3glh.3.B | monomer | 0.67 | 18.01 | |||
| 8unh.1.B | monomer | 0.61 | 24.75 | |||