P46898 (RL6_BACSU) Bacillus subtilis (strain 168)

Large ribosomal subunit protein uL6 UniProtKBInterProSTRINGInteractive Modelling

179 aa; Sequence (Fasta) ; 7 identical sequences: Bacillus subtilis subsp. subtilis NCIB 3610 = ATCC 6051 = DSM 10: A0AAX1EKG0; Bacillus sp. TSA-4: A0AA96UWM0; Bacillus sp. ANT_WA51: A0A8E0SBN9; Bacillus tequilensis: A0A6H0WDA8; Bacillus subtilis: A0A6M4JC43, A0A063X781; Bacillus subtilis subsp. subtilis: A0A199WBK2

Available Structures

30 Experimental Structures

DescriptionPDB IDOligo-stateRangeSeq id (%)Ligands
Bacillus subtilis ribosome quality control complex state B. Ribosomal 50S subunit with P-tRNA, RqcH…
7as8
 Heteromer
O31742; O34687; O34693; P05647; P05657; P0CI78; P12873; P12875; P12877; P14577; P19946; P19947; P20277; P20278; P26908; P37557; P37807; P42060; P42919; P42920; P42921; P42923; P42924; P46899; P55873; P55874; P56849; P70974; Q06796; 		2-176
100
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Structure Assessment
Structure of the bacterial RQC complex (Translocating State)
7aqd
 Heteromer
O31742; O34687; O34693; P05647; P05657; P0CI78; P12873; P12875; P12877; P14577; P19946; P19947; P20277; P20278; P26908; P37807; P42060; P42919; P42920; P42921; P42924; P46899; P55873; P55874; P56849; P70974; Q06796; 		2-176
100
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Structure Assessment
RqcH DR variant bound to 50S-peptidyl-tRNA-RqcP RQC complex (rigid body refinement)
7ope
 Heteromer
O31742; O34687; O34693; P05647; P05657; P0CI78; P12873; P12875; P12877; P14577; P19946; P19947; P20277; P20278; P26908; P37557; P37807; P42060; P42919; P42920; P42921; P42923; P42924; P46899; P55873; P55874; P56849; P70974; Q06796; 		2-176
100
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Structure Assessment
45SRbgA particle in complex with RbgA and YphC. Class A
9bsl
 Heteromer
O31742; O31743; O34687; P05647; P0CI78; P12873; P12875; P19946; P19947; P20277; P26908; P42060; P42919; P42920; P42921; P42924; P50743; P55873; P70974; Q06797; 		2-176
1003×GNP;
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Structure Assessment
Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA
6tnn
 Heteromer
O31418; O31742; O34687; P05647; P05657; P0CI78; P12873; P12875; P12877; P14577; P19946; P19947; P20277; P20278; P26908; P37807; P42060; P42919; P42920; P42921; P42923; P42924; P46899; P55873; P55874; P56849; P70974; 		2-176
100221×MG; 3×ZN;
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Structure Assessment
Bacillus subtilis MutS2-collided disome complex (stalled 70S)
8qpp
 Heteromer
O31742; O34687; P04969; P05647; P05657; P0CI78; P12873; P12874; P12875; P12877; P12878; P12879; P14577; P19946; P19947; P20277; P20278; P20282; P21464; P21465; P21466; P21467; P21468; P21469; P21470; P21471; P21472; P21473; P21474; P21475; P21476; P21477; P26908; P37437; P37807; P42060; P42919; P42920; P42921; P42924; P46899; P55873; P55874; P56849; P70974; P94545; Q03223; 		2-176
100
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Structure Assessment
RNase M5 bound to 50S ribosome with precursor 5S rRNA
6tpq
 Heteromer
A0A087LGV4; O31742; O34687; P05647; P05657; P0CI78; P12873; P12875; P12877; P14577; P19946; P19947; P20277; P20278; P26908; P37807; P42060; P42919; P42920; P42921; P42923; P42924; P46899; P55873; P55874; P56849; P70974; 		2-176
100219×MG; 3×ZN;
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Structure Assessment
Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome
6htq
 Heteromer
O31742; O34687; O54408; P04969; P05647; P05657; P0CI78; P12873; P12874; P12875; P12877; P12878; P12879; P14577; P19946; P19947; P20277; P20278; P20282; P21464; P21465; P21466; P21467; P21468; P21469; P21470; P21471; P21472; P21473; P21474; P21475; P21476; P21477; P26908; P37807; P42060; P42919; P42920; P42921; P42924; P46899; P55873; P55874; P56849; P70974; Q03223; 		2-176
100
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Structure Assessment
45SRbgA particle in complex with RbgA and YphC. Class B
9bss
 Heteromer
O31742; O31743; O34687; P05647; P05657; P0CI78; P12873; P12875; P19946; P19947; P20277; P26908; P42060; P42919; P42920; P42921; P42924; P50743; P55873; P70974; Q06797; 		2-176
1003×GNP;
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Structure Assessment
Structure of the Bacillus subtilis hibernating 100S ribosome reveals the basis for 70S dimerization.
5njt
 Heteromer
O31742; O34687; P04969; P05647; P05657; P0CI78; P12873; P12874; P12875; P12877; P12878; P12879; P14577; P19946; P19947; P20277; P20278; P20282; P21464; P21465; P21466; P21467; P21468; P21469; P21470; P21471; P21472; P21473; P21474; P21475; P21476; P21477; P26908; P28368; P37807; P42060; P42919; P42920; P42921; P42923; P42924; P46899; P55873; P55874; P56849; P70974; Q03223; 		2-176
100
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Structure Assessment
Structure of the B. subtilis disome - stalled 70S ribosome
7qgu
 Heteromer
O31742; O34687; P04969; P05647; P05657; P0CI78; P12873; P12874; P12875; P12877; P12878; P12879; P14577; P19946; P19947; P20277; P20278; P20282; P21464; P21465; P21466; P21467; P21468; P21469; P21470; P21471; P21472; P21473; P21474; P21475; P21476; P21477; P26908; P37437; P37807; P42060; P42919; P42920; P42921; P42923; P42924; P46899; P55873; P55874; P56849; P70974; Q03223; Q06796; Q7WY64; 		2-176
100
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Structure Assessment
ARE-ABCF VmlR2 bound to a 70S ribosome
8buu
 Heteromer
O31742; O34687; P04969; P05647; P05657; P0CI78; P12873; P12874; P12875; P12877; P12878; P12879; P14577; P19946; P19947; P20277; P20278; P20282; P21464; P21465; P21466; P21467; P21468; P21469; P21470; P21471; P21472; P21473; P21474; P21475; P21476; P21477; P26908; P37807; P42060; P42919; P42920; P42921; P42924; P46899; P55873; P55874; P56849; P70974; 		2-176
10016×K; 85×MG; 4×ZN; 2×ATP;
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Structure Assessment
Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex
3j9w
 Heteromer
O31742; O34687; P04969; P05647; P05657; P0CI78; P12873; P12874; P12875; P12877; P12878; P12879; P14577; P19946; P19947; P20277; P20278; P20282; P21464; P21465; P21466; P21467; P21468; P21469; P21470; P21471; P21472; P21473; P21474; P21475; P21476; P21477; P26908; P37807; P42060; P42919; P42920; P42921; P42923; P42924; P46899; P55873; P55874; P56849; P70974; Q03223; Q06796; Q7WY64; 		2-176
100
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Structure Assessment
Structure of the B. subtilis disome - collided 70S ribosome
7qh4
 Heteromer
O31742; O34687; P04969; P05647; P05657; P0CI78; P12873; P12874; P12875; P12877; P12878; P12879; P14577; P19946; P19947; P20277; P20278; P20282; P21464; P21465; P21466; P21467; P21468; P21469; P21470; P21471; P21472; P21473; P21474; P21475; P21476; P21477; P26908; P37807; P42060; P42919; P42920; P42921; P42923; P42924; P46899; P55873; P55874; P56849; P70974; Q06796; 		2-176
100
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Structure Assessment
Cryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in comple…
6ha1
 Heteromer
O31742; O34687; P04969; P05647; P05657; P0CI78; P12873; P12874; P12875; P12877; P12878; P12879; P14577; P19946; P19947; P20277; P20278; P20282; P21464; P21465; P21466; P21467; P21468; P21469; P21470; P21471; P21472; P21473; P21474; P21475; P21476; P21477; P26908; P37807; P42060; P42919; P42920; P42921; P42924; P46899; P55873; P55874; P56849; P70974; Q03223; 		2-176
1001×TEL;
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Structure Assessment
Bacillus subtilis collided disome (Leading 70S)
7qv1
 Heteromer
O31742; O34687; P04969; P05647; P05657; P0CI78; P12873; P12874; P12875; P12877; P12878; P12879; P14577; P19946; P19947; P20277; P20278; P20282; P21465; P21466; P21467; P21468; P21469; P21470; P21471; P21472; P21473; P21474; P21475; P21476; P21477; P21478; P26908; P37437; P37807; P42060; P42919; P42920; P42921; P42924; P46899; P55873; P55874; P56849; P70974; Q03223; 		2-176
100
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Structure Assessment
Bacillus subtilis collided disome (Collided 70S)
7qv2
 Heteromer
O31742; O34687; P04969; P05647; P05657; P0CI78; P12873; P12874; P12875; P12877; P12878; P12879; P14577; P19946; P19947; P20277; P20278; P20282; P21464; P21465; P21466; P21467; P21468; P21469; P21470; P21471; P21472; P21473; P21474; P21475; P21476; P21477; P26908; P37807; P42060; P42919; P42920; P42921; P42924; P46899; P55873; P55874; P56849; P70974; Q03223; 		2-176
100
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Structure Assessment
Bacillus subtilis MutS2-collided disome complex (collided 70S)
8r55
 Heteromer
O31742; O34687; P04969; P05647; P05657; P0CI78; P12873; P12874; P12875; P12877; P12878; P12879; P14577; P19946; P19947; P20277; P20278; P20282; P21464; P21465; P21466; P21467; P21468; P21469; P21470; P21471; P21472; P21473; P21474; P21475; P21476; P21477; P26908; P37807; P42060; P42919; P42920; P42921; P42924; P46899; P55873; P55874; P56849; P70974; P94545; Q03223; 		2-176
100
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Structure Assessment
Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)
7qv3
 Heteromer
O31742; O34687; P04969; P05647; P05657; P0CI78; P12873; P12874; P12875; P12877; P12878; P12879; P14577; P19946; P19947; P20277; P20278; P20282; P21465; P21466; P21467; P21468; P21469; P21470; P21471; P21472; P21473; P21474; P21475; P21476; P21477; P21478; P26908; P37437; P37807; P42060; P42919; P42920; P42921; P42924; P46899; P55873; P55874; P56849; P70974; P94545; Q03223; 		2-176
100
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Structure Assessment
Cryo-EM structure of the ABCF protein VmlR bound to the Bacillus subtilis ribosome
6ha8
 Heteromer
O31742; O34687; P04969; P05647; P05657; P0CI78; P12873; P12874; P12875; P12877; P12878; P12879; P14577; P19946; P19947; P20277; P20278; P20282; P21464; P21465; P21466; P21467; P21468; P21469; P21470; P21471; P21472; P21473; P21474; P21475; P21476; P21477; P26908; P37807; P39115; P42060; P42919; P42920; P42921; P42924; P46899; P55873; P55874; P56849; P70974; Q03223; Q06797; 		2-176
1001×TEL; 2×ATP;
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Structure Assessment
Bacillus subtilis ribosome-associated quality control complex state A. Ribosomal 50S subunit with p…
7as9
 Heteromer
O31742; O34687; O34693; P05647; P05657; P0CI78; P12873; P12875; P12877; P14577; P19946; P19947; P20277; P20278; P26908; P37807; P42060; P42919; P42920; P42921; P42923; P42924; P46899; P55873; P55874; P56849; P70974; Q06796; 		2-176
100
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Structure Assessment
Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-…
7o5b
 Heteromer
O31742; O34687; P04969; P05647; P05657; P0CI78; P12873; P12874; P12875; P12877; P12878; P12879; P14577; P19946; P19947; P20277; P20278; P20282; P21464; P21465; P21466; P21467; P21468; P21469; P21470; P21471; P21472; P21473; P21474; P21475; P21476; P21477; P26908; P37105; P37807; P42060; P42919; P42920; P42921; P42923; P42924; P46899; P55873; P55874; P56849; P70974; Q03223; Q06796; 		2-176
1001×G4P;
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Structure Assessment
Structure of the bacterial RQC complex (Decoding State)
7aqc
 Heteromer
O31742; O34687; O34693; P05647; P05657; P0CI78; P12873; P12875; P12877; P14577; P19946; P19947; P20277; P20278; P26908; P37557; P37807; P42060; P42919; P42920; P42921; P42924; P46899; P55873; P55874; P56849; P70974; Q06796; 		2-176
100
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Structure Assessment
YlmH bound to PtRNA-50S
8s1p
 Heteromer
O31742; O34687; P05647; P05657; P0CI78; P12873; P12875; P12877; P14577; P19946; P19947; P20277; P20278; P26908; P37807; P42060; P42919; P42920; P42921; P42924; P46899; P55873; P55874; P56849; P70974; P71020; Q03223; 		2-176
1004×ZN; 47×K; 1×CLM; 158×MG;
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Structure Assessment
B. subtilis ApdA-stalled ribosomal complex
8qcq
 Heteromer
O31742; O34687; P04969; P05647; P05657; P0CI78; P12873; P12874; P12875; P12877; P12878; P12879; P14577; P19946; P19947; P20277; P20278; P20282; P21465; P21467; P21468; P21469; P21470; P21471; P21472; P21473; P21475; P21476; P21477; P26908; P37807; P42060; P42919; P42920; P42921; P42924; P46899; P55873; P55874; P56849; P70974; Q03223; 		2-176
1005×ZN; 199×MG; 43×K; 1×PRO;
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Structure Assessment
YlmH bound to stalled 50S subunits with RqcH and PtRNA
8s1u
 Heteromer
O31742; O34687; O34693; P05647; P05657; P0CI78; P12873; P12875; P12877; P14577; P19946; P19947; P20277; P20278; P26908; P37807; P42060; P42919; P42920; P42921; P42924; P46899; P55873; P55874; P56849; P70974; P71020; Q03223; 		2-176
10015×K;
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Structure Assessment
Atomic model of the immature 50S subunit from Bacillus subtilis (state I-a)
3j3v
 Heteromer
O31742; O34687; P05647; P0CI78; P12873; P12875; P12877; P19946; P19947; P20277; P26908; P42060; P42919; P42920; P42921; P42924; P46899; P55873; P70974; Q06796; Q06797; 		9-171
100
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Structure Assessment
Atomic model of the immature 50S subunit from Bacillus subtilis (state II-a)
3j3w
 Heteromer
O31742; O34687; P05647; P0CI78; P12873; P12875; P19946; P20277; P26908; P42060; P42919; P42920; P42921; P42924; P55873; P70974; Q06796; Q06797; 		9-171
100
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Structure Assessment
RbgA+45SRbgA complex
6ppk
 Heteromer
O31742; O31743; O34687; P05647; P05657; P0CI78; P12873; P12875; P12877; P19946; P19947; P20277; P26908; P42060; P42919; P42920; P42921; P42924; P46899; P55873; P70974; 		60-168
1001×GNP;
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Structure Assessment
YphC-treated 45SYphC particle. Class 5
9bs0
 Heteromer
O31742; O34687; P05647; P05657; P0CI78; P12873; P12875; P19946; P19947; P20277; P26908; P42060; P42919; P42920; P42921; P42924; P46899; P50743; P55873; P56849; P70974; Q06797; 		4-83
100.02×GNP;
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Structure Assessment

1 SWISS-MODEL model

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
8qcq.1.Mmonomer0.832-176
100.00
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Model report
Structure Assessment