P53617 (NRD1_YEAST) Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Protein NRD1 UniProtKBInterProSTRINGInteractive Modelling
575 aa; Sequence (Fasta) ;
6 identical sequences: Saccharomyces cerevisiae: N1NZY7, G2WLL5, C8ZFY6, A0A7I9G4M2, B3LP95; Saccharomyces pastorianus: A0A6C1DZE7
It is possible new templates exist for this target since these models were created.
Available Structures
15 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Ligands | ||
|---|---|---|---|---|---|---|
| Structure of Nrd1 CID bound to phosphorylated RNAP II CTD |
Heteromer P04050; | |||||
| Assess | ||||||
| Structure of Nrd1p CID - Trf4p NIM complex |
Heteromer P53632; | |||||
| Assess | ||||||
| Structure of Nrd1 CID - Sen1 NIM complex |
Heteromer Q00416; | |||||
| Assess | ||||||
| Crystal structure of yeast Nrd1 CID in complex with Sen1 NIM2 |
Heteromer Q00416; | 1×CL; | ||||
| Assess | ||||||
| Crystal structure of yeast Nrd1 CID in complex with Sen1 NIM3 |
Heteromer Q00416; | 1×CL; | ||||
| Assess | ||||||
| Crystal structure of yeast Nrd1 CID in complex with Sen1 NIM1 |
Heteromer Q00416; | |||||
| Assess | ||||||
| NMR structure of a two-domain RNA-binding fragment of Nrd1 | monomer | |||||
| Assess | ||||||
| Solution structure of the RNA binding domain of Nrd1 | monomer | |||||
| Assess | ||||||
| Structure of Nrd1 RNA binding domain | monomer | 1×EDO; | ||||
| Assess | ||||||
| Structure of Nrd1 RNA binding domain in complex with RNA (GUAA) | monomer | 2×EDO; 1×TRS; | ||||
| Assess | ||||||
| Structure of Nrd1 RNA binding domain in complex with RNA (CGUAAA) | monomer | |||||
| Assess | ||||||
| Structure of Nrd1 RNA binding domain | monomer | 7×EDO; 8×SCN; | ||||
| Assess | ||||||
| Structure of Nrd1 RNA binding domain in complex with RNA (UUAGUAAUCC) | monomer | 1×TRS; | ||||
| Assess | ||||||
| Structure of the RNA polymerase II CTD-interacting domain of Nrd1 | monomer | 1×SO4; 4×GOL; | ||||
| Assess | ||||||
| Solution structure of the chimeric Nrd1-Nab3 heterodimerization domains | monomer | |||||
| Assess | ||||||
3 SWISS-MODEL models
| Template | Oligo-state | QMEANDisCo | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 6o3x.2.A | monomer | 0.79 | 100.00 | |||
| Assess | ||||||
| 5o1t.1.A | monomer | 0.68 | 100.00 | |||
| Assess | ||||||
| 7prd.1.A | monomer | 0.60 | 100.00 | |||
| Assess | ||||||