P55196 | SWISS-MODEL Repository

P55196 (AFAD_HUMAN) Homo sapiens (Human)

Afadin UniProtKB InterPro STRING Interactive Modelling

1824 aa; Sequence (Fasta) ; (Isoform 2; Isoform 1; Isoform 3; Isoform 6; Isoform 5)

Available Structures

6 Experimental Structures

Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
Solution structure of the AF-6 PDZ domain complexed with the C-terminal peptide from the Bcr protein	2ain PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P11274;	1003-1094	100
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MLLT4/Afadin PDZ domain in complex with the C-terminal peptide from protein E of SARS-CoV-2	7qcr PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P0DTC4;	1005-1095	100.0	1×SO4;
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Making Protein-Protein Interactions Drugable: Discovery of Low-Molecular-Weight Ligands for the AF6…	2exg PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1001-1096	100	1×STF;
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Structure of AF-6 PDZ domain	1xz9 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1001-1096	100
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Solution Structure Of The Pdz Domain Of AF-6	1t2m PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1003-1094	100
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Concomitant binding of Afadin to LGN and F-actin directs planar spindle orientation	5a6c PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1709-1745	100	1×SO4;
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7 SWISS-MODEL models

Template	Oligo-state	QMEANDisCo	Range	Trg-Tpl Seq id (%)
1wxa.1.A	monomer	0.73	246-348	97.09
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6amb.1.B	monomer	0.72	38-132	100.00
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1wln.1.A	monomer	0.61	381-502	95.33
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7qcr.1.B	monomer	0.60	1006-1095	100.00
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1xz9.1.A	monomer	0.55	1001-1096	100.00
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9dva.1.G	monomer	0.55	1510-1580	90.95
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5jcy.1.A	monomer	0.53	599-953	22.55
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

33 SWISS-MODEL models built on isoform sequence

Isoform	Template	Oligo-state	QMEANDisCo	Range	Trg-Tpl Seq id (%)
Isoform 1	1wxa.1.A	monomer	0.73	245-347	97.09
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Isoform 1	1wln.1.A	monomer	0.66	380-486	95.33
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Isoform 1	6amb.1.B	monomer	0.66	38-132	100.00
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Isoform 1	7qcr.1.B	monomer	0.60	990-1078	96.84
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Isoform 1	1xz9.1.A	monomer	0.55	988-1078	100.00
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Isoform 1	5jcy.1.A	monomer	0.53	583-937	22.55
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Isoform 2	1wxa.1.A	monomer	0.77	245-347	97.09
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Isoform 2	1wln.1.A	monomer	0.70	380-486	95.33
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Isoform 2	6amb.1.B	monomer	0.67	38-132	100.00
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Isoform 2	7qcr.1.B	monomer	0.67	990-1079	100.00
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Isoform 2	9dva.1.G	monomer	0.59	1494-1564	90.95
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Isoform 2	1xz9.1.A	monomer	0.56	988-1080	100.00
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Isoform 2	4lwz.1.B	monomer	0.54	580-941	21.57
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Isoform 3	1wxa.1.A	monomer	0.73	245-347	97.09
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Isoform 3	1wln.1.A	monomer	0.67	380-486	95.33
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Isoform 3	6amb.1.B	monomer	0.66	38-132	100.00
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Isoform 3	7qcr.1.B	monomer	0.60	990-1078	96.84
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Isoform 3	5jcy.1.A	monomer	0.53	583-937	22.55
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Isoform 3	1xz9.1.A	monomer	0.50	985-1079	96.84
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Isoform 5	1wxa.1.A	monomer	0.72	245-347	97.09
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Isoform 5	7qcr.1.B	monomer	0.63	1005-1094	100.00
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Isoform 5	1wln.1.A	monomer	0.63	380-501	95.33
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Isoform 5	6amb.1.B	monomer	0.62	38-132	100.00
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Isoform 5	9dva.1.G	monomer	0.59	1509-1579	90.95
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Isoform 5	1xz9.1.A	monomer	0.55	1000-1095	100.00
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Isoform 5	5jcy.1.A	monomer	0.53	598-951	22.62
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Isoform 6	1wxa.1.A	monomer	0.70	246-348	97.09
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Isoform 6	7qcr.1.B	monomer	0.68	1006-1095	100.00
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Isoform 6	6amb.1.B	monomer	0.64	38-132	100.00
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Isoform 6	1wln.1.A	monomer	0.64	381-502	95.33
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Isoform 6	1xz9.1.A	monomer	0.56	1004-1096	100.00
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Isoform 6	9dva.1.G	monomer	0.55	1510-1580	90.95
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Isoform 6	4lwz.1.B	monomer	0.54	596-957	21.57
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P55196 (AFAD_HUMAN) Homo sapiens (Human)

Afadin UniProtKBInterProSTRINGInteractive Modelling

Available Structures

6 Experimental Structures

7 SWISS-MODEL models

33 SWISS-MODEL models built on isoform sequence

Alignments

Background

Resolution

Afadin UniProtKB InterPro STRING Interactive Modelling