P9WNV3 | SWISS-MODEL Repository

P9WNV3 (LIGD_MYCTU) Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)

Multifunctional non-homologous end joining DNA repair protein LigD UniProtKB InterPro STRING Interactive Modelling

759 aa; Sequence (Fasta) ; 2 identical sequences: Mycobacterium tuberculosis: A5U0X8, A0AAQ2U4G3

It is possible new templates exist for this target since these models were created.

Available Structures

7 Experimental Structures

	Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
	Polymerase Domain from Mycobacterium tuberculosis Ligase D in complex with DNA, UTP and Manganese.	3pky PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	6-292	100	2×UTP; 4×MN;
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	Polymerase Domain from Mycobacterium tuberculosis Ligase D in complex with an annealed double-stran…	4mky PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	7-290	100
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	Crystal Structure of the Ligase Domain from M. tuberculosis LigD at 2.4A	1vs0 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	453-759	100.0	2×ZN; 2×CL; 1×MG;
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	Crystal Structure of the Polymerase Domain from Mycobacterium tuberculosis Ligase D with dGTP and M…	2iry PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	2-289	100	1×MN; 1×DGT;
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	Polymerase Domain from Mycobacterium tuberculosis Ligase D in complex with DNA	2r9l PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	6-292	100	4×EDO; 1×PEG;
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	Crystal Structure of the Polymerase Domain from Mycobacterium tuberculosis Ligase D	2iru PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	3-288	100
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	Crystal Structure of the Polymerase Domain from Mycobacterium tuberculosis Ligase D with GTP and Ma…	2irx PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	7-289	100	1×MN; 1×GTP;
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5 SWISS-MODEL models

	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	2r9l.1.B	monomer	0.87	6-292		100.00
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	1vs0.2.A	monomer	0.87	453-759		100.00
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	6nhx.1.A	monomer	0.86	453-759	1×MES;	99.34
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	3p43.1.A	monomer	0.73	323-445	1×MN;	52.05
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	6q1v.1.A	monomer	0.66	452-758		27.45
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

Alignments