Q05793 (PGBM_MOUSE) Mus musculus (Mouse)

Basement membrane-specific heparan sulfate proteoglycan core protein UniProtKBInterProInteractive Modelling

3707 aa; Sequence (Fasta)

Molecule Processing

Sequence Features

 3574Calcium
 3591Calcium; via carbonyl oxygen
 3641Calcium; via carbonyl oxygen
 3643Calcium
 3513-3514Cleavage; by BMP1
 199-212
 206-225
 219-234
 285-297
 292-310
 304-319
 325-337
 332-350
 344-359
 368-381
 375-394
 388-403
 428-479
 764-773
 766-780
 783-792
 795-811
 814-829
 816-839
 842-851
 854-869
 879-892
 894-903
 906-921
 1159-1168
 1161-1175
 1178-1187
 1190-1206
 1209-1224
 1211-1234
 1237-1246
 1249-1263
 1275-1287
 1277-1293
 1295-1304
 1307-1322
 1563-1572
 1565-1579
 1582-1591
 1594-1610
 1613-1628
 1615-1638
 1641-1650
 1653-1668
 1792-1839
 1886-1932
 1976-2021
 2073-2118
 2170-2215
 2268-2313
 2365-2413
 2456-2506
 2554-2599
 2641-2686
 2831-2876
 2917-2962
 3137-3163
 3166-3177
 3171-3187
 3204-3216
 3229-3238
 3393-3419
 3425-3436
 3430-3446
 3448-3457
 3464-3476
 3470-3481
 3483-3492
 3671-3705
 199-234Low-density lipoprotein (LDL) receptor class A repeat
IPR002172PF00057
 284-319Low-density lipoprotein (LDL) receptor class A repeat
IPR002172PF00057
 324-359Low-density lipoprotein (LDL) receptor class A repeat
IPR002172PF00057
 368-403Low-density lipoprotein (LDL) receptor class A repeat
IPR002172PF00057
 406-486Immunoglobulin I-set
IPR013098PF07679
 595-729Laminin IV
IPR000034PF00052
 764-807Laminin EGF domain
IPR002049PF00053
 814-869Laminin EGF domain
IPR002049PF00053
 990-1124Laminin IV
IPR000034PF00052
 1124-1149Laminin EGF domain
IPR002049PF00053
 1159-1206Laminin EGF domain
IPR002049PF00053
 1209-1263Laminin EGF domain
IPR002049PF00053
 1275-1322Laminin EGF domain
IPR002049PF00053
 1396-1528Laminin IV
IPR000034PF00052
 1529-1551Laminin EGF domain
IPR002049PF00053
 1563-1610Laminin EGF domain
IPR002049PF00053
 1613-1668Laminin EGF domain
IPR002049PF00053
 1865-1949Immunoglobulin I-set
IPR013098PF07679
 2151-2232Immunoglobulin I-set
IPR013098PF07679
 2253-2331Immunoglobulin I-set
IPR013098PF07679
 2344-2430Immunoglobulin I-set
IPR013098PF07679
 2442-2523Immunoglobulin I-set
IPR013098PF07679
 2533-2616Immunoglobulin I-set
IPR013098PF07679
 2723-2804Immunoglobulin I-set
IPR013098PF07679
 2819-2893Immunoglobulin I-set
IPR013098PF07679
 3013-3147Laminin G domain
IPR001791PF00054
 3166-3194EGF-like domain
IPR000742PF00008
 3276-3405Laminin G domain
IPR001791PF00054
 3425-3455EGF-like domain
IPR000742PF00008
 3551-3677Laminin G domain
IPR001791PF00054

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRangeDownloadAssess
Nidogen-1 G2/Perlecan IG3 Complex Heteromer
P10493;
ZN;EPE;1gl41769-1857

Homology models

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)DownloadAssess
monomer -4.513dmk.1.A2149-2896
22.33
monomer -4.813qcw.1.A2984-3681
24.14
monomer -4.143dmk.1.A2249-2982
22.35
monomer -4.313b43.1.A2434-2981
27.36
monomer -4.213b43.1.A2149-2703
29.58
monomer -4.955oj2.2.A2063-2606
25.81