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Q06287 (NEP1_YEAST) Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)

Ribosomal RNA small subunit methyltransferase NEP1 UniProtKBInterProSTRINGInteractive Modelling

252 aa; Sequence (Fasta) ; 8 identical sequences: Saccharomyces cerevisiae: N1P6S0, G2WJ18, C8ZDF7, C7GIX3, B5VNA4, A0A6A5PTB7, A7A176, B3RH77

Available Structures

15 Experimental Structures

DescriptionPDB IDOligo-stateRangeLigands
Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state A (Poly-Ala) Heteromer
O13516; P05756; P06367; P0C0W1; P0CX29; P0CX51; P0CX55; P15646; P25368; P25586; P25635; P26783; P26786; P32899; P33442; P33750; P34247; P35997; P36144; P38333; P38882; P39990; P40055; P40362; P40470; P40546; P42945; P47083; P53254; P53276; P53941; Q02354; Q02931; Q04177; Q04305; Q04500; Q05498; Q05946; Q06078; Q06506; Q06512; Q06679; Q08096; Q08492; Q08965; Q12035; Q12136; Q12220; Q12460; Q12499; Q3E7X9; Q99207; Q99216;
16-251
ZN;MG;GTP;
Assess
Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state Dis-A (Poly-Ala) Heteromer
O13516; P05756; P06367; P07280; P0C0W1; P0CX29; P0CX31; P0CX35; P0CX37; P0CX39; P0CX47; P0CX51; P0CX55; P15646; P25368; P25635; P26783; P26786; P32899; P33442; P34247; P35194; P35997; P38333; P38882; P39990; P40362; P41819; P42945; P47083; P53254; P53276; P53941; Q02931; Q04177; Q04217; Q04305; Q04500; Q05498; Q05946; Q06078; Q06506; Q06512; Q06679; Q08096; Q08492; Q08965; Q12035; Q12136; Q12220; Q12460; Q12499; Q3E7X9; Q99207; Q99216;
16-251
ZN;
Assess
Cryo-EM structure of 90S small subunit preribosomes in transition states (State C1) Heteromer
O13516; P0CX29; P0CX31; P0CX35; P0CX37; P0CX39; P0CX47; P0CX51; P15646; P25635; P26783; P32899; P33750; P34247; P35194; P38333; P38882; P39990; P40055; P40079; P40362; P42945; P47083; P48234; P53276; P53914; P53941; Q02354; Q02931; Q04177; Q04305; Q04500; Q05498; Q05946; Q06078; Q06506; Q06512; Q06631; Q06679; Q08096; Q08492; Q08965; Q12035; Q12136; Q12220; Q12460; Q12499; Q3E7X9; Q99207;
16-251
ZN;GTP;MG;
Assess
Cryo-EM structure of 90S preribosome with inactive Utp24 (state A2) Heteromer
O13516; P05756; P06367; P0CX29; P0CX51; P0CX55; P15646; P25368; P25586; P25635; P26783; P32899; P33750; P34247; P36144; P38333; P38882; P39990; P40055; P40362; P40470; P42945; P47083; P48589; P53254; P53276; P53941; Q02354; Q02931; Q04177; Q04305; Q04500; Q05022; Q05498; Q05946; Q06078; Q06506; Q06512; Q06679; Q08096; Q08492; Q08965; Q12035; Q12136; Q12220; Q12460; Q12499; Q3E7X9; Q99207;
16-251
ZN;GTP;MG;
Assess
Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state Dis-C Heteromer
O13516; P05756; P06367; P07280; P0C0W1; P0CX29; P0CX31; P0CX35; P0CX37; P0CX39; P0CX47; P0CX51; P0CX55; P26783; P26786; P33442; P35997; P38333; P41819; P47083; P53941; Q04217; Q04500; Q05498; Q08096; Q08965; Q12136; Q3E792; Q3E7X9; Q99207; Q99216;
25-251
ZN;GTP; 39×MG;
Assess
Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state Dis-B (Poly-Ala) Heteromer
O13516; P05756; P06367; P07280; P0C0W1; P0CX29; P0CX31; P0CX35; P0CX37; P0CX39; P0CX47; P0CX51; P0CX55; P25368; P25635; P26783; P26786; P32899; P33442; P35997; P38333; P41819; P47083; P53254; P53941; Q04217; Q05946; Q06078; Q06512; Q08096; Q08965; Q12136; Q12220; Q3E792; Q3E7X9; Q99207; Q99216;
25-251
ZN;
Assess
Cryo-EM structure of 90S small subunit preribosomes in transition states (State E) Heteromer
O13516; P05756; P06367; P0CX29; P0CX31; P0CX35; P0CX37; P0CX39; P0CX47; P0CX51; P15646; P25368; P25635; P26783; P26786; P32899; P33442; P33750; P34247; P35194; P35997; P38882; P39990; P40055; P40362; P42945; P47083; P53254; P53941; Q02354; Q02931; Q04177; Q04305; Q04500; Q05022; Q05498; Q05946; Q06078; Q06506; Q06679; Q08096; Q08965; Q12035; Q12136; Q12220; Q12460; Q12499; Q3E7X9; Q3E7Y3; Q99207;
27-251
ZN;GTP;MG;
Assess
Cryo-EM structure of the 90S pre-ribosome Heteromer
A0A0E3MJI1; A4VD76; G0S273; G0S3V7; G0S5L1; G0S7X0; G0SDL4; G0SE30; G0SE90; I7MAL3; I7MD19; O13516; P05756; P06367; P0C0W1; P0C233; P0CX51; P26783; P55858; P58032; Q06078; Q06506; Q08096; Q08965; Q22AV0; Q22B78; Q23DE3; Q3E7X9;
28-252
Assess
Cryo-EM structure of the 90S small subunit pre-ribosome (Mtr4-depleted, Enp1-TAP) Heteromer
O13516; P05756; P06367; P0C0W1; P0CX29; P0CX31; P0CX33; P0CX35; P0CX39; P0CX47; P0CX51; P15646; P25368; P25586; P25635; P26783; P26786; P32899; P33442; P35997; P36144; P39990; P40362; P42945; P47083; P53254; P53941; Q05498; Q05946; Q06078; Q06506; Q08096; Q08965; Q12220; Q12460; Q12499; Q3E7X9; Q99216;
28-252
Assess
Architecture of the yeast small subunit processome Heteromer
O13516; P0C0W1; P0CX29; P0CX31; P0CX35; P0CX37; P0CX39; P0CX47; P0CX51; P26783; P26786; P39990; Q06078; Q06506; Q08096; Q08965; Q3E7X9;
28-252
Assess
Crystal structure of Saccharomyces Cerevisiae Nep1/Emg1 bound to S-adenosylhomocysteinehomo-2-mer28-252
SAH;GOL;
Assess
Crystal structure of Saccharomyces cerevisiae Nep1/Emg1 bound to S-adenosylhomocysteine and 1 molec…homo-2-mer28-252
GOL;SAH;MG;CL;
Assess
Crystal structure of Saccharomyces Cerevisiae Nep1/Emg1 bound to S-adenosylhomocysteine and 2 molec…homo-2-mer28-252
SAH;MG;
Assess
The yeast ribosome synthesis factor Emg1 alpha beta knot fold methyltransferasemonomer23-251
SO4;
Assess
The yeast ribosome synthesis factor Emg1 alpha beta knot fold methyltransferasemonomer25-251
SO4;SAM;
Assess

1 SWISS-MODEL model

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
6zqe.1.amonomer0.7816-251
100.00
Assess