SMTL ID : 5tzs.1

Architecture of the yeast small subunit processome

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-2-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-2-1-1-1-2-1-1-1-1-1-1-1-3-1-1-mer

Ligands

None

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH

Citation

Chaker-Margot, M. et al., Architecture of the yeast small subunit processome. Science (2017)

Release Date

2016-12-21

Peptides

40S ribosomal protein S6-A: D
40S ribosomal protein S4-A: E
40S ribosomal protein S5: F
40S ribosomal protein S7-A: G
40S ribosomal protein S8-A: H
40S ribosomal protein S9-A: I
40S ribosomal protein S16-A: L
40S ribosomal protein S11-A: M
40S ribosomal protein S22-A: N
40S ribosomal protein S24-A: O
40S ribosomal protein S28-A: P
Utp4: Q
UtpA_CTD1: R
UtpA_CTD2: ST
Beta-propeller 2: U
Utp17: V
Utp1: W
Utp6: X
Utp12: Y
Utp13: Z
Utp18: 0
U3 small nucleolar RNA-associated protein 21,Utp21: 1
Beta-propeller 5: 2
Enp2: 3
UtpA_CTD4: 4
Kre33: 5
Kre33: 6
Imp3: 7
Nop56: 8
Nop58: 9
Nop1: a
Nop1: b
13 kDa ribonucleoprotein-associated protein: cd
Ribosomal RNA-processing protein 9: e
RNA 3'-terminal phosphate cyclase-like protein: f
Bms1,Ribosome biogenesis protein BMS1,Bms1,Ribosome biogenesis protein BMS1: g
Ribosomal RNA small subunit methyltransferase NEP1: hi
Utp24: j
Imp4: k
Utp30: l
Unassigned KH domain: m
Utp20: n
Repeat protein 2: o
40S ribosomal protein S23-A: p
Beta-propeller 1: qrs
Repeat protein 1: t
Unassigned protein helices: u

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

D
3

E
5

F
6

G
7

H
8

I
9

L
C

M
D

N
E

O
F

P
G

Q
H

R
I

S
J

T
K

U
M

V
N

W
O

X
P

Y
Q

Z
R

0
S

1
T

2
U

3
V

4
W

5
X

6
Y

7
Z

8
a

9
b

a
c

b
d

c
e

d
f

e
g

f
h

g
i

h
j

i
k

j
l

k
m

l
n

m
o

n
p

o
q

p
r

q
s

r
t

s
u

t
v

u
y

40S ribosomal protein S6-A

40S ribosomal protein S4-A

40S ribosomal protein S5

40S ribosomal protein S7-A

40S ribosomal protein S8-A

40S ribosomal protein S9-A

40S ribosomal protein S16-A

40S ribosomal protein S11-A

40S ribosomal protein S22-A

40S ribosomal protein S24-A

40S ribosomal protein S28-A

Utp4

UtpA_CTD1

UtpA_CTD2

Beta-propeller 2

Utp17

Utp1

Utp6

Utp12

Utp13

Utp18

U3 small nucleolar RNA-associated protein 21,Utp21

Beta-propeller 5

Enp2

UtpA_CTD4

Kre33

Kre33

Imp3

Nop56

Nop58

Nop1

Nop1

13 kDa ribonucleoprotein-associated protein

Ribosomal RNA-processing protein 9

RNA 3'-terminal phosphate cyclase-like protein

Bms1,Ribosome biogenesis protein BMS1,Bms1,Ribosome biogenesis protein BMS1

Ribosomal RNA small subunit methyltransferase NEP1

Utp24

Imp4

Utp30

Unassigned KH domain

Utp20

Repeat protein 2

40S ribosomal protein S23-A

Beta-propeller 1

Repeat protein 1

Unassigned protein helices

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