Q12149 (RRP6_YEAST) Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Exosome complex exonuclease RRP6 UniProtKBInterProSTRINGInteractive Modelling
733 aa; Sequence (Fasta)
It is possible new templates exist for this target since these models were created.
Available Structures
15 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Seq id (%) | Ligands | |
|---|---|---|---|---|---|---|
| Structure of the nuclear RNA exosome |
Heteromer P25359; P38792; P38801; P46948; P47047; P48240; P53256; P53725; P53859; Q05636; Q08162; Q08285; Q12277; | 99.76 | ||||
| Structure of a 12-subunit nuclear exosome complex bound to single-stranded RNA substrates |
Heteromer P25359; P38792; P38801; P46948; P48240; P53256; P53859; Q05636; Q08162; Q08285; Q12277; | 99.83 | 1×MG; 1×ZN; | |||
| Structure of an Rrp6-RNA exosome complex bound to poly(A) RNA |
Heteromer P25359; P38792; P46948; P48240; P53256; P53859; Q05636; Q08285; Q12277; | 99.8 | 2×MG; 1×MPD; 1×MES; 2×PO4; | |||
| STRUCTURE OF A TWELVE COMPONENT MPP6-NUCLEAR RNA EXOSOME COMPLEX BOUND TO RNA |
Heteromer P25359; P38792; P46948; P48240; P53256; P53725; P53859; Q05636; Q08162; Q08285; Q12277; | 99.78 | 5×SO4; 2×GOL; 1×ZN; | |||
| Structure of an eleven component nuclear RNA exosome complex bound to RNA |
Heteromer P25359; P38792; P46948; P48240; P53256; P53859; Q05636; Q08162; Q08285; Q12277; | 99.78 | 10×SO4; 7×GOL; 1×ZN; | |||
| Structure of a 12-subunit nuclear exosome complex bound to structured RNA |
Heteromer P25359; P38792; P46948; P48240; P53256; P53859; Q05636; Q08162; Q08285; Q12277; | 99.71 | 1×ZN; | |||
| Structure of the Rrp6-Rrp47 interaction |
Heteromer P38801; | 100.0 | 2×SO4; | |||
| Structure of the Nop53 pre-60S particle bound to the exosome nuclear cofactors |
Heteromer P02406; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CX23; P0CX25; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25382; P26321; P26784; P33201; P36105; P36160; P38061; P38202; P38801; P40010; P40078; P47047; P49166; P49167; P53188; P53261; P53742; P87262; Q02326; Q02753; Q02892; Q03862; Q07915; Q08004; Q08746; Q12522; Q12690; | 100.0 | 4×ZN; 2×GTP; 2×MG; | |||
| Structure of the Rrp6-Rrp47-Mtr4 interaction |
Heteromer P38801; P47047; | 100.0 | 8×YT3; | |||
| Crystal structure of an 11-subunit eukaryotic exosome complex bound to RNA |
Heteromer P25359; P38792; P46948; P48240; P53256; P53859; Q05636; Q08162; Q08285; Q12277; | 100.0 | 10×BR; 5×GOL; 1×MES; 1×MG; 1×ZN; | |||
| Crystal structure of the Rrp6 catalytic domain bound to poly(U) RNA | monomer | 99.74 | ||||
| Structure of the yeast nuclear exosome component, Rrp6p, reveals an interplay between the active si… | monomer | 99.74 | ||||
| Structure of the yeast nuclear exosome component, Rrp6p, reveals an interplay between the active si… | monomer | 99.74 | 2×MN; | |||
| Structure of the yeast nuclear exosome component, Rrp6p, reveals an interplay between the active si… | monomer | 99.74 | 1×ZN; 1×MN; 1×AMP; | |||
| Structure of the yeast nuclear exosome component, Rrp6p, reveals an interplay between the active si… | monomer | 99.74 | 1×ZN; 1×MN; 1×U5P; | |||
3 SWISS-MODEL models
| Template | Oligo-state | QMEAN | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 5c0w.1.K | monomer | 0.74 | 99.71 | |||
| 5c0x.1.K | monomer | 0.62 | 99.71 | |||
| 6fsz.1.L | monomer | 0.54 | 99.86 | |||