Q15276 | SWISS-MODEL Repository

Q15276 (RABE1_HUMAN) Homo sapiens (Human)

Rab GTPase-binding effector protein 1 UniProtKB InterPro STRING Interactive Modelling

862 aa; Sequence (Fasta) ; (Isoform 2)

Available Structures

6 Experimental Structures

	Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
	Crystal structure of human GGA1 GAT domain complexed with the GAT-binding domain of Rabaptin5	1x79 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer Q9UJY5;	552-641	100	2×SO4; 2×DTT;
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	Crystal structure of the Rab5, Rabex-5delta and Rabaptin-5C21 complex	4q9u PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P20339; Q9UJ41;	552-635	100
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	Crystal structure of Rabex-5CC and Rabaptin-5C21 complex	4n3y PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer Q9UJ41;	552-634	100
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	Crystal structure of Rabex-5delta and Rabaptin-5C21 complex	4n3z PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer Q9UJ41;	553-635	100	3×PO4;
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	Crystal Structure of Rab5 complex with Rabaptin5 C-terminal Domain	1tu3 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P20339;	802-852	100	2×MG; 2×GNP;
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	CRYSTAL STRUCTURE OF GGA3 GAE DOMAIN IN COMPLEX WITH RABAPTIN-5 PEPTIDE	1p4u PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer Q9NZ52;	438-445	100
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8 SWISS-MODEL models

	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	8ptk.1.W	monomer	0.68	677-812		20.57
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	6z6o.1.D	monomer	0.68	14-161		13.79
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	8pqw.1.G	monomer	0.64	680-812		20.57
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	6kn7.1.P	monomer	0.58	14-210		13.37
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	6kn7.1.Q	monomer	0.57	14-210		13.37
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	6z6o.1.D	monomer	0.54	585-727		16.18
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	7ju4.1.A	monomer	0.54	679-832		14.49
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	6l5j.1.A	homo-2-mer	0.50	109-265		24.16
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

9 SWISS-MODEL models built on isoform sequence

	Isoform	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	Isoform 2	6z6o.1.D	monomer	0.69	14-161		13.79
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	Isoform 2	6l5j.1.B	monomer	0.58	109-265		24.16
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	Isoform 2	6kn7.1.P	monomer	0.58	13-210		13.30
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	Isoform 2	9d2f.1.M	monomer	0.57	177-322		16.54
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	Isoform 2	6kn7.1.Q	monomer	0.56	13-210		13.30
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	Isoform 2	6z6o.1.D	monomer	0.55	585-728		16.06
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	Isoform 2	9d2f.1.L	monomer	0.52	177-322		16.54
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	Isoform 2	9ff9.1.B	monomer	0.52	518-658		11.76
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	Isoform 2	8j07.2.A	monomer	0.51	25-211		14.69
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Alignments