Q96CB9 | SWISS-MODEL Repository

Q96CB9 (NSUN4_HUMAN) Homo sapiens (Human)

5-cytosine rRNA methyltransferase NSUN4 UniProtKB InterPro STRING Interactive Modelling

384 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4)

Available Structures

13 Experimental Structures

Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
Structure of the human mitoribosomal large subunit in complex with NSUN4.MTERF4.GTPBP7 and MALSU1.L…	7pd3 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer L0R8F8; O14561; O75394; P09001; P49406; Q13084; Q13405; Q14197; Q16540; Q4U2R6; Q5T653; Q6P161; Q6P1L8; Q7Z2W9; Q7Z6M4; Q7Z7F7; Q7Z7H8; Q86TS9; Q8IXM3; Q8N5N7; Q8N983; Q8TAE8; Q8TCC3; Q96A35; Q96DV4; Q96EH3; Q96EL3; Q96GC5; Q9BQ48; Q9BQC6; Q9BRJ2; Q9BT17; Q9BYC8; Q9BYC9; Q9BYD1; Q9BYD2; Q9BYD3; Q9BZE1; Q9H0U6; Q9H2W6; Q9H9J2; Q9HD33; Q9NP92; Q9NQ50; Q9NRX2; Q9NVS2; Q9NWU5; Q9NX20; Q9NYK5; Q9NZE8; Q9P015; Q9P0J6; Q9P0M9; Q9Y3B7; Q9Y6G3;	19-384	100	2×ZN; 54×A; 44×U; 47×C; 1×OMG; 31×G; 1×PSU; 91×MG; 1×PNS; 1×SAM; 2×GCP;
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State C of the human mitoribosomal large subunit assembly intermediate	7odt PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer L0R8F8; O14561; O75394; P09001; P49406; Q13084; Q13405; Q14197; Q16540; Q4U2R6; Q5T653; Q6P161; Q6P1L8; Q7Z2W9; Q7Z6M4; Q7Z7F7; Q7Z7H8; Q86TS9; Q8IXM3; Q8N5N7; Q8N983; Q8TAE8; Q8TCC3; Q96A35; Q96DV4; Q96EH3; Q96EL3; Q96GC5; Q9BQ48; Q9BQC6; Q9BRJ2; Q9BYC8; Q9BYC9; Q9BYD1; Q9BYD2; Q9BYD3; Q9BZE1; Q9H0U6; Q9H2W6; Q9H4K7; Q9H9J2; Q9HD33; Q9NP92; Q9NQ50; Q9NRX2; Q9NVS2; Q9NWU5; Q9NX20; Q9NYK5; Q9NZE8; Q9P015; Q9P0J6; Q9P0M9; Q9Y3B7; Q9Y6G3;	26-383	100.0	1×GDP; 95×MG; 1×PM8; 1×SAM; 2×ZN; 10×K; 1×FES;
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Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTE…	7of7 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer L0R8F8; O14561; O75394; P09001; P49406; Q13084; Q13405; Q14197; Q16540; Q4U2R6; Q5T653; Q6P1L8; Q7Z2W9; Q7Z6M4; Q7Z7F7; Q7Z7H8; Q86TS9; Q8IXM3; Q8N5N7; Q8N983; Q8TAE8; Q8TCC3; Q96A35; Q96DV4; Q96EH3; Q96EL3; Q96GC5; Q9BQ48; Q9BQC6; Q9BRJ2; Q9BYC8; Q9BYC9; Q9BYD1; Q9BYD2; Q9BYD3; Q9BZE1; Q9H0U6; Q9H2W6; Q9H4K7; Q9H9J2; Q9HD33; Q9NP92; Q9NQ50; Q9NRX2; Q9NVS2; Q9NWU5; Q9NX20; Q9NYK5; Q9NZE8; Q9P015; Q9P0J6; Q9P0M9; Q9Y3B7; Q9Y6G3;	27-384	100.0	3×ZN; 74×MG;
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Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTE…	7of5 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer L0R8F8; O14561; O75394; P09001; P49406; Q13084; Q13405; Q14197; Q16540; Q4U2R6; Q5T653; Q6P1L8; Q7Z2W9; Q7Z6M4; Q7Z7F7; Q7Z7H8; Q86TS9; Q8IXM3; Q8N5N7; Q8N983; Q8TAE8; Q8TCC3; Q96A35; Q96DV4; Q96EH3; Q96EL3; Q96GC5; Q9BQ48; Q9BQC6; Q9BRJ2; Q9BYC8; Q9BYC9; Q9BYD1; Q9BYD2; Q9BYD3; Q9BZE1; Q9H0U6; Q9H2W6; Q9H4K7; Q9H9J2; Q9HD33; Q9NP92; Q9NQ50; Q9NRX2; Q9NVS2; Q9NWU5; Q9NX20; Q9NYK5; Q9NZE8; Q9P015; Q9P0J6; Q9P0M9; Q9Y3B7; Q9Y6G3;	27-384	100.0	3×ZN; 70×MG; 2×GTP;
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Human mitoribosomal large subunit assembly intermediate 2 with GTPBP7	8qsj PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer L0R8F8; O14561; O75394; P09001; P49406; Q13084; Q13405; Q14197; Q16540; Q4U2R6; Q5T653; Q6P161; Q6P1L8; Q7Z2W9; Q7Z6M4; Q7Z7F7; Q7Z7H8; Q86TS9; Q8IXM3; Q8N5N7; Q8N983; Q8TAE8; Q8TCC3; Q96A35; Q96DV4; Q96EH3; Q96EL3; Q96GC5; Q9BQ48; Q9BQC6; Q9BRJ2; Q9BT17; Q9BYC8; Q9BYC9; Q9BYD1; Q9BYD2; Q9BYD3; Q9BZE1; Q9H0U6; Q9H2W6; Q9H9J2; Q9HD33; Q9NP92; Q9NQ50; Q9NRX2; Q9NVS2; Q9NWU5; Q9NX20; Q9NYK5; Q9NZE8; Q9P015; Q9P0J6; Q9P0M9; Q9Y3B7; Q9Y6G3;	34-383	100.0	2×ZN; 38×MG; 1×FES; 1×PM8; 1×SAM; 1×GNP;
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human mitoribosomal large subunit assembly intermediate 1 with GTPBP10-GTPBP7	8pk0 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A4D1E9; L0R8F8; O14561; O75394; P09001; P49406; Q13084; Q13405; Q14197; Q16540; Q4U2R6; Q5T653; Q6P161; Q6P1L8; Q7Z2W9; Q7Z6M4; Q7Z7F7; Q7Z7H8; Q86TS9; Q8IXM3; Q8N5N7; Q8N983; Q8TAE8; Q8TCC3; Q96A35; Q96DV4; Q96EH3; Q96EL3; Q96GC5; Q9BQ48; Q9BQC6; Q9BRJ2; Q9BT17; Q9BYC8; Q9BYC9; Q9BYD1; Q9BYD2; Q9BYD3; Q9BZE1; Q9H0U6; Q9H2W6; Q9H9J2; Q9HD33; Q9NP92; Q9NQ50; Q9NRX2; Q9NVS2; Q9NWU5; Q9NX20; Q9NYK5; Q9NZE8; Q9P015; Q9P0M9; Q9Y3B7; Q9Y6G3;	34-383	100.0	1×ZN; 1×PM8; 1×SAM; 2×GNP; 96×MG; 10×K;
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State A of the human mitoribosomal large subunit assembly intermediate	7odr PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer L0R8F8; O14561; O75394; P09001; P49406; Q13084; Q13405; Q14197; Q16540; Q4U2R6; Q5T653; Q6P161; Q6P1L8; Q7Z2W9; Q7Z6M4; Q7Z7F7; Q7Z7H8; Q86TS9; Q8IXM3; Q8N5N7; Q8N983; Q8TAE8; Q8TCC3; Q96A35; Q96DV4; Q96EH3; Q96EL3; Q96GC5; Q9BQ48; Q9BQC6; Q9BRJ2; Q9BYC8; Q9BYC9; Q9BYD1; Q9BYD2; Q9BYD3; Q9BZE1; Q9H0U6; Q9H2W6; Q9H9J2; Q9HD33; Q9NP92; Q9NQ50; Q9NRX2; Q9NVS2; Q9NWU5; Q9NX20; Q9NYK5; Q9NZE8; Q9P015; Q9P0J6; Q9P0M9; Q9Y3B7; Q9Y6G3;	36-383	100.0	1×PM8; 1×SAM; 2×ZN; 97×MG; 2×K; 1×FES;
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State B of the human mitoribosomal large subunit assembly intermediate	7ods PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer L0R8F8; O14561; O75394; P09001; P49406; Q13084; Q13405; Q14197; Q16540; Q4U2R6; Q5T653; Q6P161; Q6P1L8; Q7Z2W9; Q7Z6M4; Q7Z7F7; Q7Z7H8; Q86TS9; Q8IXM3; Q8N5N7; Q8N983; Q8TAE8; Q8TCC3; Q96A35; Q96DV4; Q96EH3; Q96EL3; Q96GC5; Q9BQ48; Q9BQC6; Q9BRJ2; Q9BYC8; Q9BYC9; Q9BYD1; Q9BYD2; Q9BYD3; Q9BZE1; Q9H0U6; Q9H2W6; Q9H9J2; Q9HD33; Q9NP92; Q9NQ50; Q9NRX2; Q9NVS2; Q9NWU5; Q9NX20; Q9NYK5; Q9NZE8; Q9P015; Q9P0J6; Q9P0M9; Q9UI43; Q9Y3B7; Q9Y6G3;	36-383	100.0	1×PM8; 1×SAM; 2×ZN; 88×MG; 8×K; 1×N; 1×FES;
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Crystal structure of the human MTERF4:NSUN4:SAM ternary complex	4fzv PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer Q7Z6M4;	38-384	100.0	1×SAM; 1×FMT; 1×EDO;
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Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTE…	7of3 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer L0R8F8; O14561; O75394; P09001; P49406; Q13084; Q13405; Q14197; Q16540; Q4U2R6; Q5T653; Q6P1L8; Q7Z2W9; Q7Z6M4; Q7Z7F7; Q7Z7H8; Q86TS9; Q8IXM3; Q8N5N7; Q8N983; Q8TAE8; Q8TCC3; Q96A35; Q96DV4; Q96EH3; Q96EL3; Q96GC5; Q9BQ48; Q9BQC6; Q9BRJ2; Q9BYC8; Q9BYC9; Q9BYD1; Q9BYD2; Q9BYD3; Q9BZE1; Q9H0U6; Q9H2W6; Q9H9J2; Q9HD33; Q9NP92; Q9NQ50; Q9NRX2; Q9NVS2; Q9NWU5; Q9NX20; Q9NYK5; Q9NZE8; Q9P015; Q9P0J6; Q9P0M9; Q9Y3B7; Q9Y6G3;	38-384	100.0	3×ZN; 58×MG; 2×GTP;
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Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTE…	7of0 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer L0R8F8; O14561; O75394; P09001; P49406; Q13084; Q13405; Q14197; Q16540; Q4U2R6; Q5T653; Q6P1L8; Q7Z2W9; Q7Z6M4; Q7Z7F7; Q7Z7H8; Q86TS9; Q8IXM3; Q8N5N7; Q8N983; Q8TAE8; Q8TCC3; Q96A35; Q96DV4; Q96EH3; Q96EL3; Q96GC5; Q9BQ48; Q9BQC6; Q9BRJ2; Q9BYC8; Q9BYC9; Q9BYD1; Q9BYD2; Q9BYD3; Q9BZE1; Q9H0U6; Q9H2W6; Q9H9J2; Q9HD33; Q9NP92; Q9NQ50; Q9NRX2; Q9NVS2; Q9NWU5; Q9NX20; Q9NYK5; Q9NZE8; Q9P015; Q9P0J6; Q9P0M9; Q9Y3B7; Q9Y6G3;	38-384	100.0	3×ZN; 61×MG;
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Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 4	7oic PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer L0R8F8; O14561; O75394; P09001; P49406; Q13084; Q13405; Q14197; Q16540; Q4U2R6; Q5T653; Q6P161; Q6P1L8; Q7Z2W9; Q7Z6M4; Q7Z7F7; Q7Z7H8; Q86TS9; Q8IXM3; Q8N5N7; Q8N983; Q8TAE8; Q8TCC3; Q96A35; Q96DV4; Q96EH3; Q96EL3; Q96GC5; Q9BQ48; Q9BQC6; Q9BRJ2; Q9BYC8; Q9BYC9; Q9BYD1; Q9BYD2; Q9BYD3; Q9BZE1; Q9H0U6; Q9H2W6; Q9H9J2; Q9HD33; Q9NP92; Q9NQ50; Q9NRX2; Q9NVS2; Q9NWU5; Q9NX20; Q9NYK5; Q9NZE8; Q9P015; Q9P0J6; Q9P0M9; Q9Y3B7; Q9Y6G3;	38-384	100.0	76×MG; 1×C; 1×A; 3×ZN; 1×PNS; 1×SAM;
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Human MTERF4-NSUN4 protein complex	4fp9 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer Q7Z6M4;	39-384	100.0	4×SAM; 8×SO4;
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1 SWISS-MODEL model

	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	7odt.1.E	monomer	0.85	26-383	1×SAM;	100.00
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

3 SWISS-MODEL models built on isoform sequence

Isoform	Template	Oligo-state	QMEANDisCo	Range	Trg-Tpl Seq id (%)
Isoform 2	7pd3.1.w	monomer	0.58	19-146	100.00
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Isoform 3	4fp9.1.A	monomer	0.84	21-186	99.40
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Isoform 4	7o9m.53.A	monomer	0.84	1-335	100.00
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Q96CB9 (NSUN4_HUMAN) Homo sapiens (Human)

5-cytosine rRNA methyltransferase NSUN4 UniProtKBInterProSTRINGInteractive Modelling

Available Structures

13 Experimental Structures

1 SWISS-MODEL model

3 SWISS-MODEL models built on isoform sequence

Alignments

Background

Resolution

5-cytosine rRNA methyltransferase NSUN4 UniProtKB InterPro STRING Interactive Modelling