- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-2-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 2 x ZN: ZINC ION(Non-covalent)
- 54 x A: ADENOSINE-5'-MONOPHOSPHATE(Non-covalent)(Non-functional Binders)
- 44 x U: URIDINE-5'-MONOPHOSPHATE(Non-covalent)(Non-functional Binders)
U.4: 10 residues within 4Å:- Chain E: F.66, R.85, Y.89, R.101
- Chain K: U.1342, G.1343
- Ligands: A.5, G.92, A.93, G.94
Protein-ligand interaction information (PLIP) not availableU.8: 8 residues within 4Å:- Chain E: V.82, R.84
- Ligands: A.7, C.9, U.10, G.245, A.246, U.247
Protein-ligand interaction information (PLIP) not availableU.10: 12 residues within 4Å:- Chain E: V.82, K.83, R.84
- Ligands: U.8, C.9, A.243, U.244, G.245, C.249, A.250, A.251, C.252
Protein-ligand interaction information (PLIP) not availableU.12: 5 residues within 4Å:- Chain K: U.1324, G.1325
- Ligands: OMG.11, C.13, U.267
Protein-ligand interaction information (PLIP) not availableU.22: 3 residues within 4Å:- Chain K: A.1333
- Ligands: G.21, C.23
Protein-ligand interaction information (PLIP) not availableU.25: 8 residues within 4Å:- Chain K: A.1330, G.1331
- Chain O: T.245, D.247
- Ligands: C.24, A.26, C.27, G.28
Protein-ligand interaction information (PLIP) not availableU.29: 11 residues within 4Å:- Chain K: A.1045, A.1327, U.1328
- Chain O: A.242
- Ligands: A.26, C.27, G.28, G.30, U.32, MG.126, MG.166
Protein-ligand interaction information (PLIP) not availableU.32: 14 residues within 4Å:- Chain K: A.1044, A.1327, U.1328
- Chain O: Q.227, T.236, R.239, P.240, G.241, A.242
- Ligands: U.29, G.30, A.31, C.33, A.60
Protein-ligand interaction information (PLIP) not availableU.38: 3 residues within 4Å:- Chain K: U.1323
- Ligands: G.37, U.39
Protein-ligand interaction information (PLIP) not availableU.39: 4 residues within 4Å:- Chain K: A.1256, U.1323
- Ligands: U.38, C.40
Protein-ligand interaction information (PLIP) not availableU.45: 5 residues within 4Å:- Chain K: U.1068, U.1069
- Ligands: A.46, G.265
- Chain v: K.279
Protein-ligand interaction information (PLIP) not availableU.48: 7 residues within 4Å:- Chain K: A.324, U.1254, U.1255
- Ligands: A.47, C.49, A.264, G.265
Protein-ligand interaction information (PLIP) not availableU.55: 4 residues within 4Å:- Chain K: A.292, C.832
- Ligands: G.54, U.56
Protein-ligand interaction information (PLIP) not availableU.56: 5 residues within 4Å:- Chain K: G.1322
- Ligands: PSU.34, G.35, U.55, U.57
Protein-ligand interaction information (PLIP) not availableU.57: 5 residues within 4Å:- Chain K: U.286, A.1050, G.1051
- Ligands: U.56, C.58
Protein-ligand interaction information (PLIP) not availableU.59: 6 residues within 4Å:- Chain K: A.287, A.642, A.1006, A.1007
- Ligands: C.58, A.60
Protein-ligand interaction information (PLIP) not availableU.61: 11 residues within 4Å:- Chain A: A.79, A.80, P.81, K.82, R.85
- Chain K: A.638, A.639, A.1047
- Ligands: A.60, C.62, MG.135
7 PLIP interactions:2 interactions with chain A, 4 interactions with chain O, 1 interactions with chain s- Hydrogen bonds: A:K.82, O:R.221, O:V.251, O:V.251, O:G.254
- Salt bridges: A:R.85, s:R.133
U.63: 8 residues within 4Å:- Chain K: U.1015, G.1016, C.1017, A.1044, A.1045, G.1046
- Ligands: C.62, A.64
Protein-ligand interaction information (PLIP) not availableU.65: 11 residues within 4Å:- Chain K: A.1041, G.1042
- Chain O: R.221, P.253, G.254, T.255, M.257, P.258, G.259
- Ligands: C.187, U.188
Protein-ligand interaction information (PLIP) not availableU.67: 6 residues within 4Å:- Chain K: G.1361
- Ligands: A.66, U.68, A.228, A.229, U.230
Protein-ligand interaction information (PLIP) not availableU.68: 6 residues within 4Å:- Chain K: C.1339
- Ligands: A.18, U.67, C.69, A.228, A.229
Protein-ligand interaction information (PLIP) not availableU.83: 8 residues within 4Å:- Chain K: A.798
- Chain Z: Q.139, I.150
- Ligands: A.86, G.87, C.88, C.231, U.237
Protein-ligand interaction information (PLIP) not availableU.188: 7 residues within 4Å:- Chain O: R.221, W.222, K.260, G.262, I.264
- Ligands: U.65, U.219
Protein-ligand interaction information (PLIP) not availableU.194: 9 residues within 4Å:- Chain O: M.106, P.108, K.116, V.118
- Chain Z: K.91
- Ligands: C.193, C.195, G.232, A.236
Protein-ligand interaction information (PLIP) not availableU.197: 10 residues within 4Å:- Chain O: E.268, Y.269, G.270, L.271, N.286
- Ligands: A.82, A.189, G.190, C.196, U.198
Protein-ligand interaction information (PLIP) not availableU.198: 5 residues within 4Å:- Ligands: A.66, A.82, A.189, U.197, C.199
Protein-ligand interaction information (PLIP) not availableU.202: 4 residues within 4Å:- Chain O: K.141, K.303
- Ligands: A.201, A.203
Protein-ligand interaction information (PLIP) not availableU.216: 7 residues within 4Å:- Chain O: V.152, S.153, R.156
- Ligands: A.2, G.215, U.217, C.234
Protein-ligand interaction information (PLIP) not availableU.217: 8 residues within 4Å:- Chain O: W.49, K.62, V.65, D.69, S.153, R.154, F.155
- Ligands: U.216
Protein-ligand interaction information (PLIP) not availableU.219: 2 residues within 4Å:- Chain T: Y.83
- Ligands: U.188
Protein-ligand interaction information (PLIP) not availableU.220: 7 residues within 4Å:- Chain T: Y.176, R.177
- Ligands: C.241, U.247, A.248
- Chain p: R.36, R.94
Protein-ligand interaction information (PLIP) not availableU.222: 6 residues within 4Å:- Chain K: U.1364
- Chain U: H.59, Y.61
- Ligands: A.20, A.221, U.223
Protein-ligand interaction information (PLIP) not availableU.223: 5 residues within 4Å:- Chain U: K.63
- Ligands: A.18, A.19, A.20, U.222
Protein-ligand interaction information (PLIP) not availableU.225: 6 residues within 4Å:- Chain U: E.131
- Ligands: C.224, G.226, C.255, A.262
- Chain s: K.158
Protein-ligand interaction information (PLIP) not availableU.230: 5 residues within 4Å:- Chain U: N.64
- Ligands: A.66, U.67, A.82, A.229
Protein-ligand interaction information (PLIP) not availableU.237: 8 residues within 4Å:- Chain K: A.797, A.798
- Chain Z: K.231
- Ligands: U.83, C.84, A.85, A.86, C.88
Protein-ligand interaction information (PLIP) not availableU.244: 6 residues within 4Å:- Ligands: C.9, U.10, A.243, G.245, A.251, C.252
Protein-ligand interaction information (PLIP) not availableU.247: 10 residues within 4Å:- Ligands: A.7, U.8, U.220, A.246, A.248
- Chain p: R.94, M.99, P.101, H.112, E.116
Protein-ligand interaction information (PLIP) not availableU.253: 4 residues within 4Å:- Ligands: A.6, A.243, C.252, U.254
Protein-ligand interaction information (PLIP) not availableU.254: 4 residues within 4Å:- Ligands: A.5, A.6, A.93, U.253
Protein-ligand interaction information (PLIP) not availableU.258: 3 residues within 4Å:- Ligands: C.257, G.259, U.260
Protein-ligand interaction information (PLIP) not availableU.260: 5 residues within 4Å:- Ligands: A.70, G.77, A.78, U.258, G.259
Protein-ligand interaction information (PLIP) not availableU.267: 8 residues within 4Å:- Chain K: U.1369
- Ligands: OMG.11, U.12, C.13, A.14
- Chain x: A.36, K.37, R.184
Protein-ligand interaction information (PLIP) not availableU.273: 4 residues within 4Å:- Ligands: A.43, C.44, C.52, G.272
Protein-ligand interaction information (PLIP) not available- 47 x C: CYTIDINE-5'-MONOPHOSPHATE(Non-covalent)(Non-functional Binders)
C.9: 8 residues within 4Å:- Chain E: R.84
- Ligands: A.5, A.6, U.8, U.10, A.243, U.244, G.245
Protein-ligand interaction information (PLIP) not availableC.13: 3 residues within 4Å:- Ligands: U.12, A.14, U.267
Protein-ligand interaction information (PLIP) not availableC.16: 5 residues within 4Å:- Chain K: G.1366, U.1367
- Ligands: A.15, G.17
- Chain x: R.29
5 PLIP interactions:4 interactions with chain O, 1 interactions with chain U- Hydrogen bonds: O:A.244, O:T.245, O:G.246, O:D.247
- Salt bridges: U:K.63
C.23: 6 residues within 4Å:- Chain K: A.562, U.1308, G.1332, A.1333
- Ligands: U.22, C.24
Protein-ligand interaction information (PLIP) not availableC.24: 7 residues within 4Å:- Chain K: A.562, U.1308, A.1330, G.1331, G.1332
- Ligands: C.23, U.25
Protein-ligand interaction information (PLIP) not availableC.27: 8 residues within 4Å:- Chain K: A.1270, U.1324, G.1325
- Ligands: U.25, A.26, G.28, U.29, MG.166
Protein-ligand interaction information (PLIP) not availableC.33: 8 residues within 4Å:- Chain K: G.1326, A.1327
- Chain O: Q.233, T.236
- Ligands: G.30, A.31, U.32, PSU.34
Protein-ligand interaction information (PLIP) not availableC.40: 5 residues within 4Å:- Chain K: A.1055, A.1256
- Ligands: U.39, A.41, G.54
Protein-ligand interaction information (PLIP) not availableC.44: 5 residues within 4Å:- Chain K: C.838
- Ligands: A.43, C.268, G.272, U.273
Protein-ligand interaction information (PLIP) not availableC.49: 7 residues within 4Å:- Chain K: U.1255, A.1256, C.1257
- Ligands: U.48, C.50, A.264, G.270
Protein-ligand interaction information (PLIP) not availableC.50: 5 residues within 4Å:- Ligands: C.49, A.51, G.269, G.270, G.271
Protein-ligand interaction information (PLIP) not availableC.52: 6 residues within 4Å:- Chain K: A.836, G.976
- Ligands: G.42, A.43, G.53, U.273
Protein-ligand interaction information (PLIP) not availableC.58: 6 residues within 4Å:- Chain K: U.286, G.1049, A.1050
- Ligands: A.31, U.57, U.59
Protein-ligand interaction information (PLIP) not availableC.62: 7 residues within 4Å:- Chain A: R.85
- Chain K: U.1015, G.1046, A.1047
- Ligands: A.60, U.61, U.63
Protein-ligand interaction information (PLIP) not availableC.69: 6 residues within 4Å:- Chain K: C.1339
- Ligands: A.18, U.68, C.224, A.227, A.228
Protein-ligand interaction information (PLIP) not availableC.71: 6 residues within 4Å:- Chain K: A.1348, G.1349
- Ligands: A.70, G.72, G.76, G.77
Protein-ligand interaction information (PLIP) not availableC.79: 2 residues within 4Å:- Ligands: A.78, A.80
Protein-ligand interaction information (PLIP) not availableC.84: 5 residues within 4Å:- Chain K: A.796
- Chain Z: K.231
- Ligands: A.233, U.237, A.238
Protein-ligand interaction information (PLIP) not availableC.88: 7 residues within 4Å:- Chain K: A.798, C.989
- Chain U: M.91
- Ligands: U.83, G.87, G.232, U.237
Protein-ligand interaction information (PLIP) not availableC.89: 2 residues within 4Å:- Ligands: C.90, C.200
Protein-ligand interaction information (PLIP) not availableC.90: 2 residues within 4Å:- Ligands: C.89, C.91
Protein-ligand interaction information (PLIP) not availableC.91: 6 residues within 4Å:- Chain K: G.1340, A.1341, U.1357
- Ligands: C.90, G.92, G.94
3 PLIP interactions:1 interactions with chain E, 2 interactions with chain O- Hydrogen bonds: E:R.101, O:F.215
- Salt bridges: O:K.260
C.97: 3 residues within 4Å:- Ligands: A.96, G.211, A.212
Protein-ligand interaction information (PLIP) not availableC.187: 10 residues within 4Å:- Chain K: G.1042, C.1043
- Chain O: V.251, W.252, P.253, G.254, T.255, M.257
- Ligands: A.64, U.65
18 PLIP interactions:17 interactions with chain O, 1 interactions with chain Z- Hydrophobic interactions: O:V.118
- Hydrogen bonds: O:K.116, O:K.116, O:I.211, O:R.221, O:R.221, O:G.254, O:G.262, O:S.288, O:S.288, O:S.288, O:G.291
- Salt bridges: O:K.103, O:R.221, O:R.266, O:E.268, O:K.293, Z:K.91
C.192: 12 residues within 4Å:- Chain O: M.106, T.210, I.211, S.288, V.289, P.290, G.291
- Ligands: G.87, G.191, C.193, C.195, G.232
Protein-ligand interaction information (PLIP) not availableC.193: 10 residues within 4Å:- Chain O: M.106, I.211, G.291
- Ligands: A.86, G.87, C.192, U.194, C.231, G.232, A.236
Protein-ligand interaction information (PLIP) not availableC.195: 6 residues within 4Å:- Chain O: V.118
- Ligands: G.191, C.192, U.194, C.196, G.232
Protein-ligand interaction information (PLIP) not availableC.196: 7 residues within 4Å:- Chain O: N.286, G.287, S.288
- Ligands: G.190, G.191, C.195, U.197
26 PLIP interactions:2 interactions with chain X, 23 interactions with chain O, 1 interactions with chain Z- Hydrogen bonds: X:G.12, O:K.157, O:Y.165, O:K.173, O:N.180, O:G.212, O:G.212, O:N.263, O:Y.265, O:Y.269, O:N.286, O:S.288, O:H.292, O:N.294, O:K.303, O:K.303
- Salt bridges: X:H.11, O:K.141, O:K.177, O:K.177, O:K.298, O:K.298, Z:R.86
- Hydrophobic interactions: O:I.178
- pi-Stacking: O:W.48, O:H.292
C.199: 7 residues within 4Å:- Chain O: Y.269, K.303, L.304, P.305
- Ligands: A.66, U.198, C.200
Protein-ligand interaction information (PLIP) not availableC.200: 2 residues within 4Å:- Ligands: C.89, C.199
Protein-ligand interaction information (PLIP) not availableC.204: 6 residues within 4Å:- Chain O: N.180, Y.265, K.298, K.300
- Ligands: A.203, C.205
Protein-ligand interaction information (PLIP) not availableC.205: 5 residues within 4Å:- Chain O: K.177, Y.265, K.298
- Ligands: C.204, C.206
Protein-ligand interaction information (PLIP) not availableC.206: 5 residues within 4Å:- Chain O: K.177, I.178, Y.265
- Ligands: C.205, A.207
Protein-ligand interaction information (PLIP) not availableC.208: 5 residues within 4Å:- Chain A: N.106
- Chain O: G.46, T.47, W.48
- Ligands: A.2
Protein-ligand interaction information (PLIP) not availableC.224: 5 residues within 4Å:- Chain U: E.131
- Ligands: C.69, U.225, G.226, A.227
Protein-ligand interaction information (PLIP) not availableC.231: 11 residues within 4Å:- Chain U: P.92, R.95
- Chain Z: S.141, G.142, T.148
- Ligands: U.83, A.86, G.87, C.193, G.232, A.236
Protein-ligand interaction information (PLIP) not availableC.234: 6 residues within 4Å:- Chain X: K.119
- Ligands: A.2, G.214, G.215, U.216, C.235
Protein-ligand interaction information (PLIP) not availableC.235: 4 residues within 4Å:- Ligands: G.214, G.215, C.234, C.240
Protein-ligand interaction information (PLIP) not availableC.239: 6 residues within 4Å:- Chain X: R.13, V.14
- Chain Z: R.84, G.85
- Ligands: A.233, A.238
Protein-ligand interaction information (PLIP) not availableC.240: 6 residues within 4Å:- Chain Z: R.86
- Ligands: A.209, A.210, G.213, G.214, C.235
Protein-ligand interaction information (PLIP) not availableC.241: 3 residues within 4Å:- Ligands: A.7, U.220, A.246
16 PLIP interactions:13 interactions with chain p, 1 interactions with chain s, 2 interactions with chain E- Hydrogen bonds: p:M.99, p:M.99, p:R.102, p:R.113, p:R.124, p:A.155, p:S.158, E:R.85, E:G.86
- Salt bridges: p:R.94, p:H.112, p:K.120, p:R.124, p:R.132, s:K.162
- pi-Stacking: p:W.154
C.249: 10 residues within 4Å:- Chain E: K.83, R.84, R.85, G.86
- Ligands: U.10, A.250
- Chain p: W.154, A.155, S.158, V.159
Protein-ligand interaction information (PLIP) not availableC.252: 7 residues within 4Å:- Ligands: U.10, A.243, U.244,
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-2-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 2 x ZN: ZINC ION(Non-covalent)
- 54 x A: ADENOSINE-5'-MONOPHOSPHATE(Non-covalent)(Non-functional Binders)
- 44 x U: URIDINE-5'-MONOPHOSPHATE(Non-covalent)(Non-functional Binders)
- 47 x C: CYTIDINE-5'-MONOPHOSPHATE(Non-covalent)(Non-functional Binders)