Q96G25 | SWISS-MODEL Repository

Q96G25 (MED8_HUMAN) Homo sapiens (Human)

Mediator of RNA polymerase II transcription subunit 8 UniProtKB InterPro STRING Interactive Modelling

268 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3); 2 identical sequences: Pongo abelii: A0A2J8SMD2; Gorilla gorilla gorilla: A0A2I2ZUQ6

It is possible new templates exist for this target since these models were created.

Available Structures

7 Experimental Structures

	Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
	CryoEM structure of TR-TRAP	8t9d PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43513; O60244; O75448; O75586; Q13503; Q15528; Q15648; Q6P2C8; Q71SY5; Q96HR3; Q96RN5; Q9BTT4; Q9BUE0; Q9H204; Q9H944; Q9NPJ6; Q9NVC6; Q9NWA0; Q9NX70; Q9P086; Q9UHV7; Q9ULK4; Q9Y2X0; Q9Y3C7;	3-192	100.0
	Download Compare Structure Assessment
	Human Mediator (deletion of MED1-IDR) in a Tail-extended conformation	7emf PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0JLT2; O43513; O60244; O75448; O75586; O95402; Q13503; Q15528; Q15648; Q6P2C8; Q71SY5; Q96HR3; Q96RN5; Q9BTT4; Q9BUE0; Q9H204; Q9H944; Q9NPJ6; Q9NVC6; Q9NWA0; Q9NX70; Q9P086; Q9ULK4; Q9Y2X0; Q9Y3C7;	3-192	100.0	2×ZN;
	Download Compare Structure Assessment
	Human Mediator (deletion of MED1-IDR) in a Tail-bent conformation (MED-B)	7enj PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0JLT2; O43513; O60244; O75448; O75586; O95402; Q13503; Q15528; Q15648; Q6P2C8; Q96HR3; Q96RN5; Q9BTT4; Q9BUE0; Q9H204; Q9H944; Q9NPJ6; Q9NVC6; Q9NWA0; Q9NX70; Q9P086; Q9ULK4; Q9Y2X0; Q9Y3C7;	3-192	100.0	1×ZN;
	Download Compare Structure Assessment
	Structure of human transcriptional Mediator complex	8tqw PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0JLT2; O43513; O60244; O75448; O75586; P24863; P49336; Q13503; Q15528; Q15648; Q6P2C8; Q93074; Q96HR3; Q96RN5; Q9BTT4; Q9BUE0; Q9H204; Q9H944; Q9NPJ6; Q9NVC6; Q9NWA0; Q9NX70; Q9P086; Q9UHV7; Q9ULK4; Q9Y2X0; Q9Y3C7;	3-192	100.0	4×ZN;
	Download Compare Structure Assessment
	The IDRc bound human core Mediator complex	8trh PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0JLT2; O43513; O60244; O75448; O75586; Q13503; Q15528; Q15648; Q6P2C8; Q96HR3; Q96RN5; Q9BTT4; Q9BUE0; Q9H204; Q9H944; Q9NPJ6; Q9NVC6; Q9NWA0; Q9NX70; Q9P086; Q9UHV7; Q9ULK4; Q9Y2X0; Q9Y3C7;	3-192	100.0	2×ZN;
	Download Compare Structure Assessment
	Structure of the human Mediator-bound transcription pre-initiation complex	7lbm PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0JLT2; O15514; O43513; O60244; O75448; O75586; P13984; P18074; P19387; P19388; P19447; P20226; P24928; P29083; P29084; P30876; P32780; P35269; P36954; P50613; P51946; P51948; P52434; P52435; P52655; P52657; P53803; P61218; P62487; P62875; Q00403; Q13503; Q13888; Q13889; Q15528; Q6P2C8; Q6ZYL4; Q71SY5; Q92759; Q96HR3; Q96RN5; Q9BTT4; Q9BUE0; Q9H204; Q9H944; Q9NPJ6; Q9NVC6; Q9NWA0; Q9NX70; Q9P086; Q9ULK4; Q9Y2X0; Q9Y3C7;	4-189	100.0	2×MG; 16×ZN; 1×SF4;
	Download Compare Structure Assessment
	Human Mediator with RNA Polymerase II Pre-initiation complex	7nvr PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; A0A7M4DUC2; A0JLT2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O43513; O60244; O75586; P13984; P18074; P19447; P20226; P29083; P29084; P32780; P35269; P50613; P51946; P51948; P52655; P52657; P60899; Q00403; Q13503; Q13888; Q13889; Q15528; Q6P2C8; Q6ZYL4; Q92759; Q96HR3; Q9BTT4; Q9BUE0; Q9H204; Q9H944; Q9NPJ6; Q9NVC6; Q9NWA0; Q9P086; Q9Y3C7;	6-190	100.0	1×SF4; 18×ZN; 1×MG;
	Download Compare Structure Assessment

4 SWISS-MODEL models

	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	7ena.59.A	monomer	0.61	3-192		100.00
	Download ModelCIF format PDB format Model report Compare Structure Assessment
	9cjk.1.E	monomer	0.54	18-65		18.75
	Download ModelCIF format PDB format Model report Compare Structure Assessment
	8i7r.109.A	monomer	0.54	93-155		19.67
	Download ModelCIF format PDB format Model report Compare Structure Assessment
	8t1i.1.E	monomer	0.51	7-186		96.64
	Download ModelCIF format PDB format Model report Compare Structure Assessment

	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

3 SWISS-MODEL models built on isoform sequence

	Isoform	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	Isoform 2	7ena.59.A	monomer	0.58	3-192		100.00
	Download Model report Compare Structure Assessment
	Isoform 2	8i7r.109.A	monomer	0.53	93-155		19.67
	Download Model report Compare Structure Assessment
	Isoform 3	8trh.1.K	monomer	0.52	1-103		100.00
	Download ModelCIF format PDB format Model report Compare Structure Assessment

Alignments