Q96RN5 | SWISS-MODEL Repository

Q96RN5 (MED15_HUMAN) Homo sapiens (Human)

Mediator of RNA polymerase II transcription subunit 15 UniProtKB InterPro STRING Interactive Modelling

788 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3)

Available Structures

8 Experimental Structures

	Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
	Human Mediator (deletion of MED1-IDR) in a Tail-extended conformation	7emf PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0JLT2; O43513; O60244; O75448; O75586; O95402; Q13503; Q15528; Q15648; Q6P2C8; Q71SY5; Q96G25; Q96HR3; Q9BTT4; Q9BUE0; Q9H204; Q9H944; Q9NPJ6; Q9NVC6; Q9NWA0; Q9NX70; Q9P086; Q9ULK4; Q9Y2X0; Q9Y3C7;	615-788	100.0	2×ZN;
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	The IDRc bound human core Mediator complex	8trh PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0JLT2; O43513; O60244; O75448; O75586; Q13503; Q15528; Q15648; Q6P2C8; Q96G25; Q96HR3; Q9BTT4; Q9BUE0; Q9H204; Q9H944; Q9NPJ6; Q9NVC6; Q9NWA0; Q9NX70; Q9P086; Q9UHV7; Q9ULK4; Q9Y2X0; Q9Y3C7;	615-788	100.0	2×ZN;
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	Human Mediator (deletion of MED1-IDR) in a Tail-bent conformation (MED-B)	7enj PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0JLT2; O43513; O60244; O75448; O75586; O95402; Q13503; Q15528; Q15648; Q6P2C8; Q96G25; Q96HR3; Q9BTT4; Q9BUE0; Q9H204; Q9H944; Q9NPJ6; Q9NVC6; Q9NWA0; Q9NX70; Q9P086; Q9ULK4; Q9Y2X0; Q9Y3C7;	615-788	100.0	1×ZN;
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	Structure of human transcriptional Mediator complex	8tqw PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0JLT2; O43513; O60244; O75448; O75586; P24863; P49336; Q13503; Q15528; Q15648; Q6P2C8; Q93074; Q96G25; Q96HR3; Q9BTT4; Q9BUE0; Q9H204; Q9H944; Q9NPJ6; Q9NVC6; Q9NWA0; Q9NX70; Q9P086; Q9UHV7; Q9ULK4; Q9Y2X0; Q9Y3C7;	615-788	100.0	4×ZN;
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	Structure of the human Mediator-bound transcription pre-initiation complex	7lbm PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0JLT2; O15514; O43513; O60244; O75448; O75586; P13984; P18074; P19387; P19388; P19447; P20226; P24928; P29083; P29084; P30876; P32780; P35269; P36954; P50613; P51946; P51948; P52434; P52435; P52655; P52657; P53803; P61218; P62487; P62875; Q00403; Q13503; Q13888; Q13889; Q15528; Q6P2C8; Q6ZYL4; Q71SY5; Q92759; Q96G25; Q96HR3; Q9BTT4; Q9BUE0; Q9H204; Q9H944; Q9NPJ6; Q9NVC6; Q9NWA0; Q9NX70; Q9P086; Q9ULK4; Q9Y2X0; Q9Y3C7;	617-785	100.0	2×MG; 16×ZN; 1×SF4;
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	CryoEM structure of TR-TRAP	8t9d PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43513; O60244; O75448; O75586; Q13503; Q15528; Q15648; Q6P2C8; Q71SY5; Q96G25; Q96HR3; Q9BTT4; Q9BUE0; Q9H204; Q9H944; Q9NPJ6; Q9NVC6; Q9NWA0; Q9NX70; Q9P086; Q9UHV7; Q9ULK4; Q9Y2X0; Q9Y3C7;	619-785	100
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	Solution structure of ABD3 (residues 453-561) of human MED15 isoform 2	8j9a PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	493-601	100
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	Solution structure of the trans-activation domain of the human co-activator ARC105	2gut PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	5-78	100
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3 SWISS-MODEL models

	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	2gut.1.A	monomer	0.79	5-75		100.00
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	8j9a.1.A	monomer	0.65	493-600		100.00
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	8t1i.1.J	monomer	0.62	619-785		96.28
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

6 SWISS-MODEL models built on isoform sequence

	Isoform	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	Isoform 2	2gut.1.A	monomer	0.78	5-76		100.00
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	Isoform 2	8j9a.1.A	monomer	0.64	453-560		100.00
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	Isoform 2	8t1i.1.J	monomer	0.62	579-745		96.28
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	Isoform 3	8j9a.1.A	monomer	0.68	382-489		100.00
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	Isoform 3	2gut.1.A	monomer	0.68	5-76		100.00
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	Isoform 3	8t1i.1.J	monomer	0.63	508-674		96.28
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Alignments