Q96RN5 | SWISS-MODEL Repository

Q96RN5 (MED15_HUMAN) Homo sapiens (Human)

Mediator of RNA polymerase II transcription subunit 15 UniProtKB InterPro STRING Interactive Modelling

788 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3)

It is possible new templates exist for this target since these models were created.

Available Structures

4 Experimental Structures

Description	PDB ID	Oligo-state	Range	Ligands
Human Mediator (deletion of MED1-IDR) in a Tail-extended conformation	7emf SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer A0JLT2; O43513; O60244; O75448; O75586; O95402; Q13503; Q15528; Q15648; Q6P2C8; Q71SY5; Q96G25; Q96HR3; Q9BTT4; Q9BUE0; Q9H204; Q9H944; Q9NPJ6; Q9NVC6; Q9NWA0; Q9NX70; Q9P086; Q9ULK4; Q9Y2X0; Q9Y3C7;	615-788	2×ZN;
Assess
Human Mediator (deletion of MED1-IDR) in a Tail-bent conformation (MED-B)	7enj SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer A0JLT2; O43513; O60244; O75448; O75586; O95402; Q13503; Q15528; Q15648; Q6P2C8; Q96G25; Q96HR3; Q9BTT4; Q9BUE0; Q9H204; Q9H944; Q9NPJ6; Q9NVC6; Q9NWA0; Q9NX70; Q9P086; Q9ULK4; Q9Y2X0; Q9Y3C7;	615-788	1×ZN;
Assess
Structure of the human Mediator-bound transcription pre-initiation complex	7lbm SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer A0JLT2; O15514; O43513; O60244; O75448; O75586; P13984; P18074; P19387; P19388; P19447; P20226; P24928; P29083; P29084; P30876; P32780; P35269; P36954; P50613; P51946; P51948; P52434; P52435; P52655; P52657; P53803; P61218; P62487; P62875; Q00403; Q13503; Q13888; Q13889; Q15528; Q6P2C8; Q6ZYL4; Q71SY5; Q92759; Q96G25; Q96HR3; Q9BTT4; Q9BUE0; Q9H204; Q9H944; Q9NPJ6; Q9NVC6; Q9NWA0; Q9NX70; Q9P086; Q9ULK4; Q9Y2X0; Q9Y3C7;	617-785	2×MG; 16×ZN; 1×SF4;
Assess
Solution structure of the trans-activation domain of the human co-activator ARC105	2gut SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	5-78
Assess

4 SWISS-MODEL models

Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
2gut.1.A	monomer	0.79	5-75		100.00
Assess
7mkk.1.A	monomer	0.56	532-600		19.05
Assess
1x04.1.A	monomer	0.55	540-594		14.55
Assess
7lbm.1.t	monomer	0.50	617-785		100.00
Assess

Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

6 SWISS-MODEL models built on isoform sequence

Template	Isoform	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
Isoform 2	2gut.1.A	monomer	0.78	5-76		100.00
Assess
Isoform 2	1x04.1.A	monomer	0.60	500-554		14.55
Assess
Isoform 2	7mkk.1.A	monomer	0.53	492-560		19.05
Assess
Isoform 3	2gut.1.A	monomer	0.68	5-76		100.00
Assess
Isoform 3	6ff6.1.A	monomer	0.58	420-487		7.04
Assess
Isoform 3	7lbm.1.t	monomer	0.53	506-674		100.00
Assess

Alignments