Q9BUQ8 | SWISS-MODEL Repository

Q9BUQ8 (DDX23_HUMAN) Homo sapiens (Human)

Probable ATP-dependent RNA helicase DDX23 UniProtKB InterPro STRING Interactive Modelling

820 aa; Sequence (Fasta) ; (Isoform 2); 4 identical sequences: Pongo abelii: A0A2J8SYS5; Pan paniscus: A0A2R9BSV9; Gorilla gorilla gorilla: G3RGX3; Rhinopithecus roxellana: A0A2K6NXU2

It is possible new templates exist for this target since these models were created.

Available Structures

20 Experimental Structures

Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
Cryo-EM structure of the cross-exon pre-B complex	8qxd PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43172; O43290; O43395; O75533; O75643; O94906; O95777; P08579; P09661; P14678; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q12874; Q13435; Q13523; Q15029; Q15393; Q15427; Q15428; Q15459; Q53GS9; Q6P2Q9; Q7RTV0; Q8WVK2; Q8WWY3; Q96DI7; Q9BTD8; Q9BWJ5; Q9UK45; Q9Y333; Q9Y3B4; Q9Y4Y9; Q9Y4Z0;	158-806	100.0
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Cryo-EM structure of human exon-defined spliceosome in the mature pre-B state.	8h6j PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43172; O43290; O43395; O75533; O75643; O94906; O95777; P08579; P09661; P14678; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q12874; Q13435; Q13523; Q15029; Q15393; Q15427; Q15428; Q15459; Q53GS9; Q6P2Q9; Q7RTV0; Q8WVK2; Q8WWY3; Q96DI7; Q9BTD8; Q9BWJ5; Q9UK45; Q9Y333; Q9Y3B4; Q9Y4Y9; Q9Y4Z0;	158-806	100.0	1×IHP; 1×MG; 1×GTP; 1×ZN;
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Cryo-EM Structure of the human minor pre-B complex (pre-precatalytic spliceosome) U11 and tri-snRNP…	8y6o PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43172; O43290; O43395; O75643; O94906; P14678; P55769; P62304; P62306; P62308; P62314; P62316; P62318; Q13523; Q15029; Q16560; Q53GS9; Q6IEG0; Q6P2Q9; Q86UT8; Q8N8D1; Q8WWY3; Q96DI7; Q9BV90; Q9NX01; Q9UDW3;	158-806	100.0	2×MG; 1×IHP; 1×GTP; 6×ZN;
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Structure of the human U5.U4/U6 tri-snRNP at 2.9A resolution.	6qw6 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43172; O43290; O43395; O75643; O94906; O95777; P14678; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q15029; Q53GS9; Q6P2Q9; Q8WVK2; Q8WWY3; Q96DI7; Q9BTD8; Q9UK45; Q9Y333; Q9Y4Y9; Q9Y4Z0;	158-806	100.0	1×IHP; 1×MG; 1×GTP; 1×ZN;
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Structure of the recycling U5 snRNP bound to chaperone CD2BP2 (State 4)	8q7x PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75643; O94906; O95400; P14678; P62304; P62306; P62308; P62314; P62316; P62318; Q15029; Q6P2Q9; Q96DI7;	158-805	100.0	1×MG; 1×GTP;
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Structure of the recycling U5 snRNP bound to chaperone CD2BP2 (State 3)	8q7w PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75643; O94906; O95400; P14678; P62304; P62306; P62308; P62314; P62316; P62318; Q15029; Q6P2Q9; Q96DI7;	242-805	100.0	1×MG; 1×GTP;
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Cryo-EM structure of the cross-exon pre-B+5'ss complex	8r0a PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43172; O43290; O43395; O75533; O75643; O94906; O95777; P08579; P09661; P14678; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q12874; Q13435; Q13523; Q15029; Q15393; Q15427; Q15428; Q15459; Q53GS9; Q6P2Q9; Q7RTV0; Q8WVK2; Q8WWY3; Q96DI7; Q9BTD8; Q9BWJ5; Q9UK45; Q9Y333; Q9Y3B4; Q9Y4Y9; Q9Y4Z0;	158-630	100.0
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3D structure determination of the humanU4/U6.U5 tri-snRNP complex	3jcr PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43172; O43395; O75643; O94906; O95777; P14678; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q15029; Q53GS9; Q6P2Q9; Q8WWY3; Q96DI7; Q9UK45; Q9Y333; Q9Y4Y9; Q9Y4Z0;	352-806	100.0
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The Cryo-EM Structure of the Precusor of Human Pre-catalytic Spliceosome (pre-B complex)	6ah0 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43172; O43395; O75533; O75643; O94906; O95777; P08579; P09661; P14678; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q12874; Q13435; Q15029; Q15393; Q15427; Q15428; Q15459; Q53GS9; Q6P2Q9; Q7RTV0; Q8WWY3; Q96DI7; Q9BWJ5; Q9UK45; Q9Y333; Q9Y3B4; Q9Y4Y9; Q9Y4Z0;	352-790	100.0	1×IHP; 1×GTP; 1×MG;
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Cryo-EM structure of the cross-exon pre-B+5'ssLNG+ATPyS complex	8rm5 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43172; O43290; O43395; O43447; O75533; O75643; O94906; O95777; P08579; P09661; P14678; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q12874; Q13435; Q15029; Q15393; Q15427; Q15428; Q15459; Q53GS9; Q6P2Q9; Q7RTV0; Q8WWY3; Q96DI7; Q9BWJ5; Q9UK45; Q9Y333; Q9Y3B4; Q9Y4Y9; Q9Y4Z0;	241-630	100.0
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Cryo-EM structure of the cross-exon pre-B+5'ss+ATPgammaS complex	8r09 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43172; O43290; O43395; O43447; O75533; O75643; O94906; O95777; P08579; P09661; P14678; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q12874; Q13435; Q15029; Q15393; Q15427; Q15428; Q15459; Q53GS9; Q6P2Q9; Q7RTV0; Q8WWY3; Q96DI7; Q9BWJ5; Q9UK45; Q9Y333; Q9Y3B4; Q9Y4Y9; Q9Y4Z0;	241-630	100.0
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Cryo-EM structure of human exon-defined spliceosome in the late pre-B state.	8h6e PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43172; O43290; O43395; O75533; O75643; O94906; O95777; P08579; P09661; P14678; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q12874; Q13435; Q13523; Q15029; Q15393; Q15427; Q15428; Q15459; Q53GS9; Q6P2Q9; Q7RTV0; Q8WVK2; Q8WWY3; Q96DI7; Q9BTD8; Q9BWJ5; Q9UK45; Q9Y333; Q9Y3B4; Q9Y4Y9; Q9Y4Z0;	158-361	100.0	1×IHP; 1×MG; 1×GTP; 1×ZN;
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Cryo-EM Structure of Pre-B+5'ss+ATPgammaS Complex (core part)	8qoz PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43172; O43290; O43395; O75643; O94906; P55769; P83876; Q15029; Q15459; Q53GS9; Q6P2Q9; Q8WWY3;	241-376	100.0	1×IHP;
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Cryo-EM Structure of Pre-B+5'ssLNG Complex (core part)	8qpa PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43172; O43290; O43395; O75643; O94906; P55769; P83876; Q15029; Q15459; Q53GS9; Q6P2Q9; Q8WWY3;	241-376	100.0	1×IHP;
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Cryo-EM Structure of Pre-B Complex (core part)	8qp8 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43290; O43395; O94906; P83876; Q15029; Q15459; Q53GS9; Q6P2Q9; Q8WVK2; Q8WWY3; Q9BTD8;	242-356	100.0	1×IHP;
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Cryo-EM Structure of Pre-B+AMPPNP Complex (core part)	8qp9 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43290; O43395; O75643; O94906; P83876; Q15029; Q15459; Q53GS9; Q6P2Q9; Q8WVK2; Q8WWY3; Q9BTD8;	242-356	100.0	1×IHP;
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Structure of the human 20S U5 snRNP core	8q91 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75643; O94906; O95400; P14678; P62304; P62306; P62308; P62314; P62316; P62318; Q15029; Q6P2Q9;	243-311	100.0	1×GTP;
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Cryo-EM structure of the cross-exon pre-B+ATP complex	8r0b PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43172; O43290; O43395; O43447; O75533; O75643; O94906; O95777; P08579; P09661; P14678; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q12874; Q13435; Q15029; Q15393; Q15427; Q15428; Q15459; Q53GS9; Q6P2Q9; Q7RTV0; Q8WWY3; Q96DI7; Q9BWJ5; Q9UK45; Q9Y333; Q9Y3B4; Q9Y4Y9; Q9Y4Z0;	273-329	100
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Cryo-EM Structure of Pre-B+ATP Complex (core part)	8qpb PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43172; O43290; O43395; O75643; O94906; P55769; P83876; Q15029; Q15459; Q53GS9; Q6P2Q9; Q8WWY3;	273-329	100	1×IHP;
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Structure of the spliceosomal DEAD-box protein Prp28	4nho PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	352-806	100.0	5×SO4; 2×GOL; 1×CXS; 1×HG;
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8 SWISS-MODEL models

Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
6ah0.1.s	monomer	0.80	352-790		100.00
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8q7w.1.F	monomer	0.75	242-805		100.00
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8h6j.1.5	monomer	0.73	158-806		100.00
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6o5f.1.A	monomer	0.68	375-803		41.58
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4kbf.1.A	monomer	0.68	393-778		37.43
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4kbf.2.A	monomer	0.67	393-778		37.43
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2hxy.3.A	monomer	0.63	392-781		33.05
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7bdi.1.A	monomer	0.52	393-818	1×MG;	18.77
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

Q9BUQ8 (DDX23_HUMAN) Homo sapiens (Human)

Probable ATP-dependent RNA helicase DDX23 UniProtKBInterProSTRINGInteractive Modelling

Available Structures

20 Experimental Structures

8 SWISS-MODEL models

Alignments

Background

Resolution

Probable ATP-dependent RNA helicase DDX23 UniProtKB InterPro STRING Interactive Modelling