Q9HCJ0 (TNR6C_HUMAN) Homo sapiens (Human)

Trinucleotide repeat-containing gene 6C protein UniProtKBInterProSTRINGInteractive Modelling

1690 aa; Sequence (Fasta) ; (Isoform 2; )

Sequence Features

Add
 820P -> R (in dbSNP:rs34293811) VAR_052237 dbSNP
 815-941Argonaute hook domain
IPR019486PF10427
 944-973Ubiquitin-associated domain
IPR015940PF00627
 1020-1248GW182, middle domain
IPR026805PF12938
 1258-1434TNRC6, PABC binding domain
IPR032226PF16608
 1435-1512TNRC6, PABC binding domain
IPR032226PF16608

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRange
Structural basis of GW182 recognition by poly(A)-binding protein Heteromer
P11940;
3ktp1384-1399
Assess
Crystal structure of the PABC-TNRC6C complex Heteromer
P11940;
SO4;2x041385-1399
Assess
Solution Structure of the UBA Domain in the Human Trinucleotide Repeat Containing 6C Protein (hTNRC…monomer 2dkl927-998
Assess

Homology models

Oligo-stateQMEANTemplateRangeSeq id (%)Ligands
monomer -1.88 2wbr.1.A1509-1595
56.32
Assess

Homology models built on isoform sequence

IsoformOligo-stateLigandsQMEANTemplateRangeSeq id (%)
Isoform 2monomer-2.012dkl.1.A924-995
100.00
Assess
Isoform 2monomer-1.832wbr.1.A1546-1631
56.98
Assess