SMTL ID : 5tf6.1 (1 other biounit)

Structure and conformational plasticity of the U6 small nuclear ribonucleoprotein core

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

2 x K: POTASSIUM ION(Non-covalent)(Non-functional Binders)

K.1: 1 residues within 4Å: Chain A: N.5 No protein-ligand interaction detected (PLIP) K.6: 5 residues within 4Å: Chain B: A.30, G.31, C.32, G.57, U.58 No protein-ligand interaction detected (PLIP)

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 4 residues within 4Å: Chain A: R.4, N.5, R.6, T.9 Ligand excluded by PLIP CL.3: 4 residues within 4Å: Chain A: S.161, P.163 Chain B: G.21, G.23 Ligand excluded by PLIP

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 4 residues within 4Å: Chain A: T.354, N.356, D.357, R.360 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:T.354, A:N.356, A:R.360 Water bridges: A:T.354, A:N.356 GOL.5: 6 residues within 4Å: Chain A: S.95, Y.96, T.97, N.100, E.152, Q.298 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.95, A:Q.298 Water bridges: A:N.100, A:N.100 GOL.7: 4 residues within 4Å: Chain B: A.22, G.23, A.24, U.25 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Montemayor, E.J. et al., Structure and conformational plasticity of the U6 small nuclear ribonucleoprotein core. Acta Crystallogr D Struct Biol (2017)

Release Date

2017-01-11

Peptides

U4/U6 snRNA-associated-splicing factor PRP24: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

U4/U6 snRNA-associated-splicing factor PRP24

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