Q9UIS9 | SWISS-MODEL Repository

Q9UIS9 (MBD1_HUMAN) Homo sapiens (Human)

Methyl-CpG-binding domain protein 1 UniProtKB InterPro STRING Interactive Modelling

605 aa; Sequence (Fasta) ; (Isoform 2; Isoform 4; Isoform 5; Isoform 6; Isoform 7; Isoform 8; Isoform 9; Isoform 10; Isoform 11; Isoform 12)

It is possible new templates exist for this target since these models were created.

Available Structures

5 Experimental Structures

Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
Solution Structure of the Methyl-CpG-Binding Domain of Human MBD1 in Complex with Methylated DNA	1ig4 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1-75	100
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SOLUTION STRUCTURE OF THE METHYL-CPG-BINDING DOMAIN OF THE METHYLATION-DEPENDENT TRANSCRIPTIONAL RE…	1d9n PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1-75	100
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Complex of MBD1-MBD and methylated DNA	6d1t PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	2-70	100	12×UNX;
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Zinc finger region of MBD1 in complex with CpG DNA	5w9q PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	333-388	100	2×ZN; 8×UNX;
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Solution structure of human MBD1 CXXC1 domain	4d4w PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	167-222	100
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2 SWISS-MODEL models

Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
5w9q.1.A	monomer	0.68	333-388	2×ZN;	100.00
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1ig4.1.C	monomer	0.64	1-75		100.00
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

24 SWISS-MODEL models built on isoform sequence

Isoform	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
Isoform 2	5w9q.1.A	monomer	0.69	310-365	2×ZN;	100.00
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Isoform 2	1ig4.1.C	monomer	0.61	1-75		100.00
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Isoform 4	4d4w.1.A	monomer	0.71	167-222		100.00
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Isoform 4	1ig4.1.C	monomer	0.53	1-75		100.00
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Isoform 5	5w9q.1.A	monomer	0.69	284-339	2×ZN;	100.00
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Isoform 5	1ig4.1.C	monomer	0.62	1-75		100.00
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Isoform 5	4d4w.1.A	monomer	0.50	167-217		50.98
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Isoform 6	5w9q.1.A	monomer	0.68	333-388	2×ZN;	100.00
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Isoform 6	1d9n.1.A	monomer	0.59	1-75		100.00
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Isoform 7	4d4w.1.A	monomer	0.71	167-222		100.00
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Isoform 7	1ig4.1.C	monomer	0.61	1-75		100.00
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Isoform 8	5w9q.1.A	monomer	0.68	310-365	2×ZN;	100.00
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Isoform 8	1d9n.1.A	monomer	0.58	1-75		100.00
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Isoform 9	5w9q.1.A	monomer	0.68	358-413	2×ZN;	100.00
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Isoform 9	4d4w.1.A	monomer	0.67	167-222		100.00
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Isoform 9	1ig4.1.C	monomer	0.64	1-75		100.00
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Isoform 10	5w9q.1.A	monomer	0.69	283-338	2×ZN;	100.00
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Isoform 10	1ig4.1.C	monomer	0.62	1-75		100.00
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Isoform 10	4d4w.1.A	monomer	0.50	167-217		50.98
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Isoform 11	4d4w.1.A	monomer	0.71	167-222		100.00
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Isoform 11	1ig4.1.C	monomer	0.61	1-75		100.00
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Isoform 11	5w9q.1.A	monomer	0.51	220-266	1×ZN;	35.42
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Isoform 12	5w9q.1.A	monomer	0.68	333-388	2×ZN;	100.00
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Isoform 12	1ig4.1.C	monomer	0.64	1-75		100.00
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Q9UIS9 (MBD1_HUMAN) Homo sapiens (Human)

Methyl-CpG-binding domain protein 1 UniProtKBInterProSTRINGInteractive Modelling

Available Structures

5 Experimental Structures

2 SWISS-MODEL models

24 SWISS-MODEL models built on isoform sequence

Alignments

Background

Resolution

Methyl-CpG-binding domain protein 1 UniProtKB InterPro STRING Interactive Modelling