Q9UIS9 (MBD1_HUMAN) Homo sapiens (Human)

Methyl-CpG-binding domain protein 1 UniProtKBInterProSTRINGInteractive Modelling

605 aa; Sequence (Fasta) ; (Isoform 2; Isoform 4; Isoform 5; Isoform 6; Isoform 7; Isoform 8; Isoform 9; Isoform 10; Isoform 11; Isoform 12; )

Sequence Features

 401P -> A (in dbSNP:rs125555). VAR_019513 dbSNP
 169-216CXXC-type 1.
 217-263CXXC-type 2.
 330-378CXXC-type 3.
 3-67Methyl-CpG DNA binding
IPR001739PF01429
 169-215Zinc finger, CXXC-type
IPR002857PF02008
 219-262Zinc finger, CXXC-type
IPR002857PF02008
 331-377Zinc finger, CXXC-type
IPR002857PF02008

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRangeDownloadAssess
Complex of MBD1-MBD and methylated DNAmonomer 12×UNX;6d1t2-70
Zinc finger region of MBD1 in complex with CpG DNAmonomer UNX;ZN;5w9q333-388
Solution structure of human MBD1 CXXC1 domainmonomer 4d4w167-222

Homology models

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownloadAssess
monomer -2.861d9n.1.A1-75
100.00

Homology models built on isoform sequence

Isoform #Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownloadAssess
7monomer-2.432jyi.1.A220-266
46.81
8monomerZN;-2.024nw3.1.A220-266
46.81
11monomer-2.422jyi.1.A220-266
46.81
4monomerZN;-2.224nw3.1.A220-267
43.75
5monomer-2.004d4w.1.A167-215
55.10
10monomer-2.004d4w.1.A167-215
55.10
2monomerZN;-1.645w9q.1.A310-365
100.00
2monomer-4.094d4w.1.A167-222
100.00
4monomer-3.774d4w.1.A167-222
100.00
5monomerZN;-1.615w9q.1.A284-339
100.00
6monomerZN;-1.605w9q.1.A333-388
100.00
6monomer-4.034d4w.1.A167-222
100.00
7monomer-3.974d4w.1.A167-222
100.00
8monomerZN;-1.645w9q.1.A310-365
100.00
8monomer-4.094d4w.1.A167-222
100.00
9monomer-3.864d4w.1.A167-222
100.00
9monomerZN;-1.645w9q.1.A358-413
100.00
9monomerZN;-2.364pzi.1.A220-273
38.18
10monomerZN;-1.615w9q.1.A283-338
100.00
11monomer-3.974d4w.1.A167-222
100.00
12monomer-4.104d4w.1.A167-222
100.00
12monomerZN;-1.585w9q.1.A333-388
100.00
12monomer0.846d1t.1.A2-69
100.00
2monomer-2.861d9n.1.A1-75
100.00
4monomer-2.861d9n.1.A1-75
100.00
5monomer-2.861d9n.1.A1-75
100.00
6monomer-2.861d9n.1.A1-75
100.00
7monomer-2.881d9n.1.A1-75
100.00
8monomer-2.861d9n.1.A1-75
100.00
9monomer-2.861d9n.1.A1-75
100.00
10monomer-2.861d9n.1.A1-75
100.00
11monomer-2.861d9n.1.A1-75
100.00