Q9Y2J8 (PADI2_HUMAN) Homo sapiens (Human)
Protein-arginine deiminase type-2 UniProtKBInterProSTRINGInteractive Modelling
665 aa; Sequence (Fasta) ; (Isoform 2; ) Identical sequences: Pan troglodytes: A0A6D2WA59; H2PY57; Pan paniscus: A0A2R9BZA0
Sequence Features
| 647 | Nucleophile | ||
| 123 | Calcium 1 | ||
| 125 | Calcium 1 | ||
| 127 | Calcium 1 | ||
| 129 | Calcium 1; via carbonyl oxygen | ||
| 131 | Calcium 1 | ||
| 154 | Calcium 2 | ||
| 156 | Calcium 2 | ||
| 156 | Calcium 3 | ||
| 158 | Calcium 2 | ||
| 158 | Calcium 3 | ||
| 166 | Calcium 2 | ||
| 166 | Calcium 4; via carbonyl oxygen | ||
| 169 | Calcium 4 | ||
| 171 | Calcium 4; via carbonyl oxygen | ||
| 177 | Calcium 2 | ||
| 180 | Calcium 2 | ||
| 180 | Calcium 3 | ||
| 354 | Calcium 5 | ||
| 389 | Calcium 3 | ||
| 408 | Calcium 5; via carbonyl oxygen | ||
| 411 | Calcium 5; via carbonyl oxygen | ||
| 412 | Calcium 5 | ||
| 1-114 | Protein-arginine deiminase (PAD) N-terminal IPR013732PF08526 | ||
| 116-274 | Protein-arginine deiminase (PAD), central domain IPR013733PF08527 | ||
| 284-662 | Protein-arginine deiminase, C-terminal IPR013530PF03068 |
Sequence Alignments
Experimental structures
| Description | Oligo-state | Ligands | Structure | Range |
|---|---|---|---|---|
| Crystal structure of Protein Arginine Deiminase 2 (Q350A, 10 mM Ca2+) | homo-2-mer | 10×MPD; 10×CA; 10×ACT; | 4n2l | |
| Assess | ||||
| Crystal structure of Protein Arginine Deiminase 2 (D169A, 0 mM Ca2+) | homo-2-mer | 8×MPD; 4×CA; 2×ACT; | 4n2f | |
| Assess | ||||
| Crystal structure of Protein Arginine Deiminase 2 (E354A, 10 mM Ca2+) | homo-2-mer | 6×MPD; 8×CA; 4×ACT; | 4n2n | |
| Assess | ||||
| Crystal structure of Protein Arginine Deiminase 2 (D177A, 10 mM Ca2+) | homo-2-mer | 8×MPD; 10×CA; 4×ACT; | 4n2i | |
| Assess | ||||
| Crystal structure of Protein Arginine Deiminase 2 (Q350A, 0 mM Ca2+) | homo-2-mer | 6×MPD; 4×CA; 2×GOL; | 4n2k | |
| Assess | ||||
| Crystal structure of Protein Arginine Deiminase 2 (E354A, 0 mM Ca2+) | homo-2-mer | 8×MPD; 2×ACT; 2×CA; | 4n2m | |
| Assess | ||||
| Crystal structure of Protein Arginine Deiminase 2 (0 mM Ca2+) | homo-2-mer | 6×MPD; 2×ACT; 4×CA; | 4n20 | |
| Assess | ||||
| Crystal structure of Protein Arginine Deiminase 2 (10 mM Ca2+) | homo-2-mer | 8×MPD; 10×CA; | 4n2b | |
| Assess | ||||
| Crystal structure of Protein Arginine Deiminase 2 (5 mM Ca2+) | homo-2-mer | 8×MPD; 10×CA; 4×ACT; | 4n2a | |
| Assess | ||||
| Crystal structure of Protein Arginine Deiminase 2 (D177A, 0 mM Ca2+) | homo-2-mer | 6×MPD; 4×CA; | 4n2h | |
| Assess | ||||
| Crystal structure of Protein Arginine Deiminase 2 (D169A, 10 mM Ca2+) | homo-2-mer | 10×MPD; 8×CA; 2×ACT; 2×GOL; | 4n2g | |
| Assess | ||||
| Crystal structure of Protein Arginine Deiminase 2 (D123N, 10 mM Ca2+) | homo-2-mer | 8×MPD; 10×CA; | 4n2e | |
| Assess | ||||
| Crystal structure of Protein Arginine Deiminase 2 (1 mM Ca2+) | homo-2-mer | 8×MPD; 2×ACT; 10×CA; | 4n28 | |
| Assess | ||||
| Crystal structure of Protein Arginine Deiminase 2 (50 uM Ca2+) | homo-2-mer | 6×ACT; 2×GOL; 4×CA; 2×MPD; | 4n22 | |
| Assess | ||||
| Crystal structure of Protein Arginine Deiminase 2 (250 uM Ca2+) | homo-2-mer | 2×MRD; 4×MPD; 2×ACT; 10×CA; | 4n25 | |
| Assess | ||||
| Crystal structure of Protein Arginine Deiminase 2 (500 uM Ca2+) | homo-2-mer | 6×MPD; 2×ACT; 10×CA; | 4n26 | |
| Assess | ||||
| Crystal structure of Protein Arginine Deiminase 2 (100 uM Ca2+) | homo-2-mer | 2×MRD; 4×MPD; 4×CA; 4×GOL; 2×ACT; | 4n24 | |
| Assess | ||||
| Crystal structure of Protein Arginine Deiminase 2 (D123N, 0 mM Ca2+) | homo-2-mer | 6×MPD; 4×CA; | 4n2d | |
| Assess | ||||
| Crystal structure of Protein Arginine Deiminase 2 (F221/222A, 10 mM Ca2+) | homo-2-mer | 12×CA; | 4n2c | |
| Assess | ||||
Homology models built on isoform sequence
| Isoform | Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) |
|---|---|---|---|---|---|---|
| Isoform 2 | homo-2-mer | 8×CA; | 0.47 | 4n2n.1.B | 99.77 | |
| Assess | ||||||